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Heatmap: Cluster_158 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
14.47 13.3 10.43 10.89 13.67 13.87 12.42 8.51 12.51 12.41 10.83 9.98 50.07 23.82 22.68 42.8 10.81 8.02 9.54 1.69 13.23 0.94 16.04 19.91 5.73 1.89 3.79 3.22 9.22 9.49 9.77 8.38
0.31 0.31 0.42 0.26 0.52 0.17 0.5 0.42 0.28 0.81 0.3 0.39 0.3 1.65 0.59 0.77 0.2 1.06 0.18 0.63 0.69 0.16 0.24 0.43 0.49 0.56 0.7 0.41 0.26 0.39 0.13 0.08
25.05 38.86 49.53 73.9 109.86 118.71 121.55 64.55 61.4 43.78 38.44 25.34 880.4 590.61 460.9 350.27 132.61 164.44 73.19 0.57 1.26 0.0 77.52 205.04 96.14 23.58 53.51 64.95 104.6 201.59 72.59 78.68
21.5 19.93 20.96 19.86 16.78 17.39 21.12 22.72 25.23 31.24 28.54 27.35 132.26 50.96 59.0 83.37 12.2 8.56 17.46 8.3 4.53 8.63 3.26 5.76 2.46 23.85 12.0 9.88 12.05 14.72 10.25 9.75
23.17 21.2 21.0 19.95 23.97 17.96 14.87 21.27 24.07 26.74 23.94 22.61 153.29 63.11 20.34 138.24 2.87 5.71 18.49 0.0 0.06 0.0 26.61 49.92 8.02 43.32 19.46 16.66 13.91 16.57 10.4 10.67
3.15 1.37 4.73 3.76 7.83 3.76 1.35 2.39 4.38 8.51 5.51 5.04 104.94 71.13 25.17 61.13 0.85 0.67 5.44 0.0 0.0 0.0 1.22 3.65 0.71 5.04 3.6 2.69 4.46 9.39 4.38 8.18
1.16 0.9 0.6 0.93 1.47 0.95 0.9 1.79 0.99 1.48 2.19 1.12 30.84 17.48 13.69 22.43 0.47 0.44 1.1 1.59 0.0 3.23 0.53 2.13 1.15 3.27 1.85 2.35 0.55 0.91 1.65 1.47
2.68 1.63 1.8 2.58 2.65 2.79 1.7 3.9 2.06 3.73 4.12 3.13 59.46 24.69 27.53 24.15 0.37 0.23 0.81 0.0 0.6 0.0 0.24 1.9 1.06 2.2 1.68 3.46 0.53 1.21 0.37 0.58
0.92 0.57 0.94 0.94 0.55 0.64 0.48 0.81 0.78 0.55 0.92 0.88 6.83 4.73 3.76 5.59 0.35 0.43 0.71 0.0 0.0 0.0 1.45 1.44 0.21 0.43 0.46 0.52 0.57 0.76 0.28 0.26
20.54 33.46 31.3 36.45 36.03 41.69 24.88 23.5 26.49 26.23 23.64 22.37 148.78 75.75 92.74 71.64 13.41 15.76 6.64 0.17 0.0 0.0 23.42 21.37 2.66 6.42 5.98 7.22 12.35 18.92 8.01 7.84
14.88 12.72 15.21 11.83 9.52 12.77 10.54 5.35 5.28 13.0 7.96 11.18 35.68 66.51 16.22 26.6 1.22 7.22 6.44 0.0 4.33 0.88 0.77 3.73 3.36 4.94 1.38 1.59 1.67 2.28 1.41 2.21
0.3 0.38 0.29 0.46 1.07 0.53 0.54 0.35 0.18 0.5 0.77 0.32 9.06 9.36 2.5 10.68 0.41 1.09 2.75 0.0 0.29 0.13 0.99 1.64 0.18 0.71 1.78 0.9 1.13 1.86 0.79 1.33
0.14 0.05 0.0 0.03 0.74 0.0 0.05 0.11 0.0 0.0 0.0 0.04 0.53 3.76 0.0 0.05 0.36 0.18 0.41 0.0 0.0 0.0 0.0 0.0 0.0 0.11 0.33 0.22 0.15 0.19 0.0 0.28
0.57 0.73 1.02 0.66 3.29 0.76 1.84 1.12 0.92 2.31 1.08 1.11 15.74 23.36 1.93 12.36 0.51 1.07 1.61 0.12 0.0 0.0 0.88 1.29 0.27 1.22 0.17 0.0 1.04 0.75 0.86 0.94
0.23 0.27 0.59 0.42 1.44 0.34 0.41 0.55 0.59 0.79 0.58 0.6 3.08 3.71 1.79 2.09 0.31 0.44 0.34 0.0 0.05 0.0 0.38 0.14 0.43 0.3 1.24 1.16 0.0 0.23 0.25 0.45
1.5 1.51 1.24 1.46 1.12 0.9 0.97 1.05 1.21 2.07 3.18 4.29 26.31 12.93 6.74 18.76 0.36 0.41 0.28 1.18 1.32 1.3 0.72 1.56 0.56 0.21 0.32 0.2 0.64 0.6 0.61 0.92
0.13 0.05 0.17 0.03 0.03 0.24 0.09 0.19 0.1 0.16 0.04 0.02 5.73 9.42 2.3 3.88 0.18 0.48 1.63 0.0 0.0 0.0 0.12 0.08 0.0 1.38 0.49 0.15 0.34 0.13 0.63 0.12
0.49 0.46 0.26 0.68 1.21 0.57 0.56 0.52 0.47 0.79 0.61 0.78 4.14 6.69 6.9 2.62 0.65 0.8 0.1 0.0 0.0 0.0 0.37 0.55 0.19 0.57 0.45 0.24 0.29 0.36 0.19 0.18
0.12 0.09 0.09 0.1 0.0 0.04 0.17 0.21 0.09 0.14 0.3 0.2 1.58 3.21 0.8 1.35 0.0 0.0 0.06 0.0 0.09 0.0 0.0 0.0 0.28 0.69 0.31 0.12 0.02 0.17 0.02 0.02
0.2 0.17 0.25 0.23 0.27 0.23 0.35 0.19 0.14 0.22 0.46 0.27 1.55 3.17 2.75 1.21 0.17 4.32 0.82 0.0 0.0 0.0 0.55 1.17 0.51 0.09 0.0 0.2 0.31 0.26 0.2 0.28
3.57 5.26 4.91 5.75 8.09 3.84 7.98 12.05 10.88 9.36 8.27 5.49 34.36 114.33 23.35 16.68 0.74 4.41 4.19 0.0 0.37 0.14 0.58 4.18 22.73 20.99 8.59 7.56 0.71 2.56 0.68 2.56
0.47 0.06 0.14 0.15 0.18 0.17 0.12 0.16 0.29 0.09 0.09 0.16 3.58 2.95 0.05 6.55 0.0 0.14 0.49 0.0 0.0 0.0 0.05 0.12 0.33 0.17 0.09 0.0 0.24 0.12 0.07 0.0
0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.32 0.1 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0
0.73 0.98 0.12 0.22 0.62 0.42 0.26 0.87 0.16 0.33 0.27 0.39 12.78 11.38 0.86 7.81 0.09 1.34 3.69 0.0 0.07 0.0 0.27 0.4 0.22 3.06 0.94 0.0 0.65 0.21 1.08 0.18
0.04 0.01 0.01 0.02 0.0 0.01 0.0 0.02 0.0 0.0 0.0 0.05 3.26 4.24 0.18 2.41 0.05 0.33 3.13 0.0 0.0 0.0 0.09 0.11 0.0 0.79 0.3 0.0 0.15 0.05 0.3 0.07
2.32 1.9 2.53 2.66 2.41 2.21 1.93 2.35 2.37 3.04 2.71 1.93 23.81 9.69 2.11 22.36 0.12 0.14 0.37 0.0 0.0 0.0 0.73 3.06 0.87 3.9 5.01 5.22 0.5 0.87 0.4 0.63
0.19 0.12 0.05 0.17 0.27 0.34 0.47 0.74 0.22 2.79 0.74 0.36 38.35 37.08 33.24 17.74 0.71 0.75 0.74 4.37 0.0 0.0 0.43 1.6 0.27 0.27 0.5 0.31 1.61 1.58 1.31 1.91
11.24 14.01 11.12 9.98 11.53 8.93 11.27 12.06 9.91 11.25 10.85 8.92 44.06 23.9 10.93 42.32 8.71 4.72 7.26 0.39 1.72 0.0 4.59 4.7 6.04 9.26 11.1 8.13 8.32 8.32 10.96 8.47
0.16 0.2 0.06 0.27 0.19 0.15 0.24 0.2 0.33 0.21 0.24 0.37 5.87 3.24 1.8 4.34 0.04 0.08 0.07 0.15 0.0 0.0 0.08 0.07 0.15 0.47 0.1 0.17 0.37 0.22 0.0 0.1
0.66 0.14 0.73 0.68 0.76 0.42 0.36 0.22 0.33 0.76 0.21 0.39 4.09 4.95 5.01 4.85 0.0 1.32 0.15 0.0 0.0 0.96 0.0 0.07 0.0 0.16 0.0 0.0 0.08 0.15 0.0 0.0
7.42 7.17 5.61 5.27 5.35 4.06 3.05 4.83 4.55 7.88 6.23 5.33 32.31 13.4 5.43 18.71 0.36 0.25 1.31 0.0 2.47 2.14 2.41 4.04 4.56 9.78 2.2 3.75 1.09 0.91 1.72 0.83
0.63 0.05 0.0 0.04 0.13 0.18 0.0 0.33 0.0 0.11 0.36 0.41 7.0 7.22 0.39 8.73 0.0 3.08 0.83 0.0 0.0 0.0 0.07 0.24 0.26 1.8 0.29 0.0 0.89 0.12 0.36 0.06
2.33 2.47 2.47 3.2 3.03 2.97 2.49 2.62 2.33 2.98 2.45 2.57 6.27 11.67 5.21 7.21 1.05 0.99 1.72 0.34 0.84 1.56 2.15 2.17 0.74 2.08 2.48 2.26 1.12 1.34 0.87 1.1
0.68 0.91 0.89 0.86 2.61 0.89 0.62 0.45 1.06 0.33 0.69 0.34 3.53 12.78 2.17 1.44 0.08 0.49 0.34 0.0 0.03 0.0 0.13 0.62 2.13 1.5 4.49 2.24 0.26 0.58 0.49 1.86
16.89 13.04 12.65 17.44 20.65 16.06 16.84 27.22 25.23 32.9 26.64 23.88 247.28 105.75 13.74 169.67 3.52 1.7 4.22 1.45 6.15 3.57 3.03 5.74 10.71 36.34 21.63 24.54 7.44 8.12 3.16 1.89
43.66 36.65 27.87 43.24 56.57 40.08 48.34 64.7 62.93 89.18 71.59 59.27 896.17 417.92 179.48 569.64 11.5 12.09 124.73 7.5 4.22 4.27 10.83 34.85 22.51 172.96 24.42 33.56 20.52 34.0 13.32 21.75
26.7 25.46 26.18 27.79 33.8 30.69 27.58 28.02 34.71 31.73 32.36 31.09 430.99 215.0 88.25 553.87 23.13 63.54 27.93 45.17 49.5 110.4 78.36 84.05 20.64 17.04 35.56 21.02 45.66 51.78 62.21 89.55
17.24 28.95 35.06 35.77 48.48 36.34 80.96 49.95 68.41 46.08 49.51 24.63 208.9 205.25 147.39 36.76 18.38 78.58 17.76 0.63 0.14 0.0 21.8 35.1 30.37 41.63 37.47 39.45 13.1 21.9 11.74 18.77
18.79 22.99 26.75 19.8 14.8 26.33 21.94 16.77 18.35 20.15 22.55 14.3 96.15 47.16 39.85 46.94 16.56 28.82 7.94 4.98 1.17 3.61 25.17 17.25 4.89 3.02 7.36 9.72 16.38 18.58 7.64 8.79
0.29 2.17 0.16 0.0 0.0 0.39 0.0 0.66 0.0 0.0 0.88 0.36 4.13 10.36 0.04 4.21 0.0 0.0 0.26 0.0 0.0 0.0 0.0 0.06 0.0 0.56 2.57 0.0 0.09 0.0 0.0 0.0
14.2 11.73 13.53 17.2 17.85 15.48 10.87 15.74 14.7 20.14 17.14 12.77 116.61 71.98 22.14 130.79 3.66 6.25 15.17 0.0 0.18 0.05 7.75 12.29 6.32 24.05 14.98 16.15 6.72 7.72 2.71 2.95
0.29 0.33 0.21 0.77 0.61 0.77 0.31 0.68 0.27 0.42 0.31 0.54 5.78 4.81 1.95 6.93 0.2 0.25 0.05 0.0 0.0 0.0 0.49 1.64 0.27 0.24 0.12 0.22 0.39 0.24 0.21 0.23
29.46 28.87 22.61 22.13 22.41 22.08 17.48 20.63 23.93 26.79 23.46 23.76 112.06 57.97 19.97 87.83 13.72 12.82 32.85 3.52 15.81 5.71 23.22 25.65 23.33 28.53 17.65 19.64 16.46 17.66 18.3 18.58
16.52 14.18 9.01 11.87 14.68 11.62 12.54 16.14 14.53 20.02 13.53 9.38 113.68 50.54 55.26 118.04 8.73 8.1 9.15 0.0 0.0 0.0 2.6 5.12 0.0 14.8 18.1 13.81 7.46 10.31 7.19 6.69
31.78 23.29 17.55 22.64 19.47 18.31 14.53 21.99 18.07 27.63 25.1 23.82 238.25 229.69 83.25 193.23 3.95 4.16 2.54 1.37 7.38 0.0 4.74 10.67 7.48 6.05 4.76 6.65 4.93 8.78 6.36 7.04
0.01 0.03 0.0 0.01 0.0 0.01 0.13 0.04 0.0 0.01 0.0 0.02 1.03 0.45 0.03 1.11 0.0 0.01 0.06 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05
100.62 131.7 147.86 128.95 131.28 83.5 57.83 45.9 39.91 49.08 57.21 77.51 550.64 323.97 135.04 424.44 49.45 60.61 67.08 40.13 37.94 41.91 64.44 137.32 78.88 145.03 29.51 41.46 40.08 72.63 12.36 22.34
8.85 8.17 8.4 6.99 8.09 7.25 6.02 6.73 6.93 8.82 10.13 6.82 58.92 19.17 8.4 37.11 4.32 2.7 9.49 2.11 0.13 0.0 6.74 9.0 1.26 9.55 4.42 6.96 4.75 5.79 4.7 4.39
0.31 0.95 0.47 1.03 1.09 0.87 0.31 0.58 0.28 0.22 0.08 0.38 7.19 7.0 3.36 6.19 0.77 1.01 0.19 0.0 0.0 0.0 0.69 0.68 0.0 0.24 0.0 0.32 0.14 0.45 0.63 0.56
2.28 2.76 2.36 3.16 2.05 3.65 2.96 1.99 1.97 3.78 1.95 2.22 41.62 21.57 17.69 27.27 3.09 5.87 2.92 2.46 3.73 0.08 7.24 5.82 3.59 1.63 1.44 1.49 3.05 3.34 2.94 3.14
0.46 0.89 0.37 0.73 0.76 0.79 0.38 1.11 0.28 0.58 1.52 0.67 5.18 12.98 3.22 5.69 0.3 0.44 0.38 2.68 1.38 0.86 0.18 0.55 2.22 0.12 0.0 0.0 0.26 0.2 0.5 0.33
0.12 0.01 0.01 0.11 0.33 0.04 0.03 0.02 0.17 0.2 0.12 0.06 0.31 1.16 0.25 0.14 0.0 0.0 0.06 0.0 0.0 0.0 0.02 0.0 0.0 0.08 0.11 0.15 0.02 0.03 0.03 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)