Heatmap: Cluster_79 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
7.4 6.41 5.06 7.5 7.79 7.55 7.92 8.2 8.86 9.12 8.98 8.36 16.72 8.89 7.31 11.38 5.61 5.37 6.65 0.1 5.58 0.53 24.94 23.45 6.97 3.89 4.18 3.11 7.86 8.31 6.83 7.93
243.84 183.75 178.03 145.29 166.5 158.92 109.33 76.83 110.56 127.93 161.08 158.24 482.7 171.06 105.86 138.45 79.15 122.53 29.66 8.57 21.35 57.29 155.6 278.62 23.02 25.5 80.03 80.92 60.02 107.27 53.3 58.67
29.07 43.38 56.34 34.21 34.14 43.42 24.02 35.41 35.67 39.67 39.26 29.3 137.31 15.23 0.5 67.78 22.85 35.5 52.2 0.0 0.0 0.0 155.36 79.31 25.9 19.96 26.64 22.36 26.48 32.54 21.58 20.21
4.93 4.91 5.56 4.59 2.29 5.31 4.14 5.98 4.51 6.12 6.95 4.98 17.87 7.12 0.86 8.18 0.97 1.26 0.26 0.0 0.0 0.0 11.61 3.37 0.82 2.12 2.17 2.62 1.43 1.42 5.43 5.91
4.54 4.43 3.92 3.79 3.73 4.02 3.73 3.21 3.06 3.69 3.37 3.31 10.17 1.43 4.42 3.67 2.98 4.93 1.76 0.07 0.07 8.42 16.79 19.43 1.66 4.08 3.05 3.92 3.75 3.98 2.23 4.6
1.78 2.4 2.14 2.38 1.26 2.31 2.01 1.42 2.89 1.79 2.45 2.66 8.9 5.7 0.39 6.25 3.49 3.01 0.92 0.0 0.0 0.0 18.04 15.77 0.87 2.34 1.21 0.9 4.25 4.53 4.19 4.46
2.53 2.97 4.0 2.9 3.11 3.15 3.01 3.1 3.04 3.03 2.63 3.33 9.58 15.49 1.45 5.32 3.24 2.2 0.94 0.4 1.48 0.0 20.3 17.7 5.5 5.54 6.06 5.51 2.7 3.77 3.46 2.69
1.94 2.52 3.74 3.66 2.71 3.07 3.27 3.53 4.62 3.99 3.18 2.85 8.56 4.22 3.22 9.85 2.63 1.57 4.28 4.89 2.33 8.97 11.52 15.12 4.36 5.23 2.82 3.31 3.4 4.59 2.22 1.71
0.12 0.0 0.11 0.14 0.0 0.07 0.0 0.06 0.06 0.17 0.07 0.07 1.27 0.0 0.0 0.45 0.26 0.0 0.51 0.0 0.0 0.0 1.29 0.51 0.0 0.29 0.0 0.0 0.32 0.33 0.13 0.19
0.08 0.05 0.02 0.03 0.09 0.02 0.09 0.04 0.02 0.03 0.02 0.16 2.17 0.0 0.04 0.38 0.0 0.0 0.27 0.0 0.05 0.29 0.41 1.64 0.08 0.04 0.0 0.0 0.86 0.03 0.0 0.04
27.59 22.98 29.3 23.05 25.59 25.24 25.76 25.23 38.25 33.68 32.47 39.88 117.13 12.79 4.56 59.42 11.22 10.53 11.5 4.51 24.17 23.07 30.37 31.22 6.22 10.63 5.96 5.06 16.63 16.4 6.98 6.16
0.46 0.29 0.19 0.27 0.11 0.24 0.22 0.69 0.49 0.16 0.09 0.35 0.1 0.04 0.01 0.13 0.37 0.3 0.81 0.0 0.05 0.0 1.96 2.45 0.08 0.23 0.18 0.6 0.37 0.23 0.42 0.16
6.24 7.88 10.61 9.6 12.59 12.72 8.56 8.48 8.09 7.67 7.11 6.54 62.19 5.9 4.0 17.18 5.93 13.22 12.07 9.92 1.19 1.31 73.46 125.62 37.14 5.93 9.1 11.45 12.16 15.7 9.92 9.26
227.75 477.36 591.06 539.62 525.01 465.02 447.31 231.73 214.9 190.09 182.46 145.98 959.77 185.62 0.33 855.96 347.8 313.26 477.94 68.89 269.64 1.3 1244.59 1134.81 280.34 235.48 443.28 486.51 243.75 262.8 128.54 268.76
13.91 14.49 14.34 14.09 12.7 12.85 12.05 15.03 17.19 16.57 21.18 13.05 68.58 15.07 5.42 28.44 12.8 8.08 26.9 5.98 0.68 7.77 36.66 43.84 11.27 17.03 9.36 7.02 18.74 21.09 9.47 13.12
2.94 4.6 4.87 4.2 3.73 2.62 3.9 2.36 3.46 2.98 4.02 3.46 31.56 0.29 1.23 5.04 2.84 2.01 0.82 0.36 0.0 0.28 31.9 26.48 1.12 3.44 1.04 1.23 3.01 3.48 1.91 3.09
10.58 11.56 15.44 15.99 13.98 16.41 17.44 16.77 21.29 18.91 15.13 13.15 42.68 3.2 0.67 12.11 10.95 8.1 59.68 0.01 0.47 0.0 30.86 44.55 1.9 9.93 8.96 10.33 15.32 18.44 20.21 12.03
145.01 191.01 230.99 231.7 261.65 277.71 233.32 217.79 197.41 197.5 199.46 156.26 425.17 118.87 22.93 289.32 114.51 54.21 30.43 6.49 13.65 3.52 540.45 242.02 89.87 85.28 75.68 93.63 98.26 111.83 97.01 98.65
5.95 7.34 8.33 6.19 6.74 7.6 7.29 6.19 7.36 5.61 7.22 8.27 22.04 18.47 4.13 15.3 5.85 7.41 0.92 0.0 0.0 0.0 40.22 32.83 2.1 2.55 2.77 4.31 6.89 8.34 7.69 7.71
87.58 121.31 62.28 39.34 44.88 29.26 34.44 23.39 31.78 14.46 26.91 30.6 123.2 14.86 6.29 27.81 20.24 16.3 10.4 0.2 4.93 0.25 12.49 14.46 2.4 3.49 9.89 5.83 38.74 46.33 6.06 4.63
7.62 8.56 6.98 8.59 9.47 7.35 8.43 5.7 7.48 10.03 12.36 9.6 25.15 4.04 0.36 12.54 10.1 5.35 2.65 0.0 0.0 0.0 41.19 11.11 0.29 5.56 4.5 5.1 8.91 9.96 9.73 9.3
0.2 0.34 0.5 0.41 0.39 0.32 0.29 0.13 0.24 0.33 0.18 0.33 0.98 1.16 0.27 0.62 0.4 0.45 0.36 0.0 0.0 0.0 1.43 0.8 0.06 0.16 0.34 0.29 0.25 0.3 0.18 0.24
7.03 8.99 7.64 9.0 4.37 8.5 8.65 8.0 7.3 8.33 9.87 8.41 38.63 9.24 4.36 17.62 5.93 2.68 5.2 0.2 2.48 1.34 27.03 11.94 12.15 5.99 5.91 5.65 8.29 9.4 6.48 6.72
18.21 14.79 16.89 14.75 16.21 16.12 9.3 14.78 17.98 20.25 18.18 15.25 55.52 6.1 2.12 53.63 11.0 11.67 18.64 0.0 0.0 0.0 55.98 52.4 18.09 24.23 8.49 12.97 13.47 13.44 5.87 7.88
1.99 1.93 0.0 1.38 0.98 0.0 0.0 0.57 2.25 1.81 3.87 1.89 148.52 0.44 0.0 35.29 0.44 8.21 1.87 0.0 0.0 0.0 17.43 145.24 1.26 2.3 0.53 0.39 5.94 12.74 12.74 8.31
50.08 38.94 49.59 39.21 38.6 38.86 45.62 36.23 38.84 39.88 40.01 48.62 137.73 164.87 42.95 74.88 55.28 115.33 22.4 0.14 9.53 0.0 223.16 204.7 12.74 10.88 19.64 15.21 68.56 82.13 86.73 82.17
22.61 26.48 24.29 28.6 24.11 28.98 29.99 25.13 32.46 32.03 30.26 24.32 56.49 12.55 1.73 29.27 21.33 20.01 6.01 0.04 0.18 0.0 99.65 26.16 2.17 16.51 11.24 15.27 21.09 21.37 19.72 21.98
6.89 7.88 6.96 9.67 8.63 7.72 11.84 8.58 10.03 9.68 10.62 9.19 20.55 2.62 0.12 10.94 8.94 5.45 1.66 0.02 0.0 0.12 33.84 8.7 1.38 2.92 3.63 4.41 7.91 8.48 8.57 10.76
588.16 746.06 821.84 660.12 530.27 457.27 561.09 473.03 621.37 721.86 639.77 552.25 947.28 1158.35 18.98 578.44 519.52 238.07 57.54 51.74 142.51 1.62 1622.43 659.64 201.92 463.51 158.46 187.47 350.5 349.04 325.26 284.49
0.9 1.01 1.92 0.89 2.05 1.51 1.34 0.9 1.0 1.08 1.42 0.83 1.59 1.47 0.4 1.51 1.03 0.59 0.41 0.0 0.0 0.0 2.98 1.81 0.07 0.52 0.45 0.54 0.82 0.96 0.82 0.78
0.0 1.16 0.0 3.37 0.0 9.57 1.17 0.0 1.96 0.0 0.0 1.18 47.13 1.1 0.0 33.97 11.38 25.88 1.89 0.0 0.0 0.0 66.79 68.42 5.36 2.79 0.0 0.0 13.87 18.19 15.76 17.27
6.46 9.4 6.34 6.65 10.08 8.1 6.76 6.56 8.17 8.97 10.1 7.43 82.12 6.67 12.45 34.78 8.01 21.49 1.36 0.0 0.0 0.0 117.6 35.66 6.13 10.12 8.49 4.53 11.78 15.12 13.93 13.44
5.04 3.48 3.94 4.14 5.63 5.31 4.16 5.66 5.67 5.66 5.51 4.56 12.03 5.28 1.54 5.19 1.7 1.61 2.19 3.68 0.07 1.57 7.19 5.8 1.0 2.93 3.18 2.38 2.58 3.06 2.6 2.91
1.35 1.67 2.37 2.52 3.08 2.0 3.27 2.43 4.33 3.12 2.84 2.2 4.41 1.41 1.09 3.26 3.14 3.56 5.72 0.56 2.56 1.13 5.06 6.11 1.58 1.85 1.44 1.14 2.82 2.92 2.93 3.54
8.56 8.03 10.05 4.37 5.17 4.41 1.37 5.57 5.34 5.1 3.97 2.72 51.9 2.08 0.02 15.98 0.58 0.19 0.46 0.0 0.0 0.0 5.91 26.81 7.02 8.15 13.29 0.36 1.63 1.39 3.06 3.96
0.02 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.1 0.0 0.07 0.0 0.16 0.0 0.02 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.38 1.19 0.0 0.0 0.0 0.0 0.0 0.03 0.12 0.03
7.59 8.66 21.48 24.93 26.41 27.34 21.74 13.69 13.74 11.41 11.72 10.79 105.5 56.94 35.52 35.49 39.14 36.46 14.7 12.98 7.63 10.17 183.39 167.31 69.22 14.87 20.04 30.49 28.69 33.32 17.3 17.24
3.98 3.61 2.39 3.96 3.76 6.35 5.36 8.79 10.21 5.89 5.24 6.89 11.18 0.46 0.06 11.25 2.6 3.36 2.55 0.0 2.25 0.0 34.53 41.11 2.67 7.35 8.73 3.88 9.75 5.51 7.13 6.43
5.05 4.34 4.16 3.62 3.44 3.29 3.92 7.49 6.79 4.51 4.84 5.51 28.47 8.5 1.5 12.45 2.83 1.98 8.8 0.0 0.71 0.0 11.03 25.35 13.89 6.66 8.75 4.39 4.38 4.48 5.47 3.62
3.27 3.85 2.9 4.35 4.9 3.72 5.32 3.89 4.67 4.81 4.66 4.1 17.31 1.93 0.03 8.56 6.43 4.6 9.04 0.0 0.0 0.0 34.4 9.4 1.8 3.9 2.48 2.35 5.33 5.57 5.92 5.33
24.74 32.37 47.32 42.19 52.11 53.21 30.13 33.78 37.29 35.22 37.65 26.94 109.49 8.73 3.09 106.94 35.69 35.03 20.84 24.17 6.61 25.11 134.81 80.78 34.7 24.8 22.96 29.2 58.02 59.75 45.32 31.5
11.77 9.47 10.57 9.9 10.29 9.85 9.86 8.77 9.37 11.13 13.1 9.68 18.83 16.87 4.95 19.73 8.93 8.17 12.22 14.77 7.67 6.29 34.85 29.5 6.55 10.73 6.31 5.91 10.38 11.83 12.73 12.57
27.37 28.73 26.51 45.68 48.91 39.39 35.69 42.02 48.91 37.19 37.11 34.75 187.9 14.38 24.3 115.23 42.96 22.81 57.06 7.46 4.15 0.43 66.63 62.52 14.7 49.28 39.61 48.02 43.15 47.99 45.31 56.78
2.02 1.24 1.98 2.61 4.58 2.57 4.55 4.03 5.47 6.99 4.25 2.29 7.49 0.33 0.61 6.66 5.01 6.16 3.83 0.04 2.77 2.47 5.15 5.93 6.45 2.29 0.16 1.22 4.91 3.99 3.86 5.33
0.74 0.81 0.99 1.0 0.9 0.87 0.43 0.71 0.41 0.73 0.56 1.06 7.13 0.37 0.3 3.72 0.81 0.2 0.56 0.0 0.0 0.0 1.79 4.48 1.21 0.34 0.3 0.37 0.77 0.95 0.33 0.25
10.55 7.76 8.85 9.29 15.0 11.02 11.76 14.36 11.21 13.49 13.76 11.3 36.67 7.53 6.69 21.77 8.71 8.1 15.94 1.86 1.84 3.04 20.66 20.84 7.09 12.87 7.33 9.38 13.87 11.71 13.29 16.87
3.07 4.16 3.92 3.83 4.45 4.01 4.84 3.46 4.04 4.37 3.18 3.53 4.02 2.61 1.77 4.04 3.33 2.62 2.87 1.74 0.0 0.0 10.03 5.49 0.59 1.24 1.52 1.4 3.31 4.06 4.61 5.25
1.88 3.21 3.34 3.02 5.79 4.34 5.61 7.61 7.24 6.76 5.53 3.79 22.96 5.32 5.0 9.99 7.73 3.31 8.87 3.94 6.21 2.63 33.67 45.64 19.87 10.09 9.93 10.69 10.07 11.99 6.26 7.31
16.02 19.26 18.4 20.66 14.97 17.5 20.23 13.12 18.81 23.26 16.72 18.81 150.0 6.36 3.1 17.95 26.94 23.85 4.49 0.26 0.63 0.05 119.16 170.95 21.93 4.72 6.49 6.83 33.69 30.84 23.3 27.78
48.3 59.98 30.82 20.47 21.34 10.84 17.09 16.44 16.14 6.49 14.39 20.38 99.76 6.02 1.88 23.51 11.33 7.35 4.97 0.0 0.0 0.0 8.33 7.67 0.53 3.59 8.82 4.15 33.47 26.48 3.28 2.1
27.12 33.68 36.67 33.99 30.82 33.6 28.36 58.72 58.46 70.55 65.64 53.53 336.81 7.02 0.85 181.15 12.79 37.66 9.53 1.71 0.0 9.96 201.46 222.25 19.58 44.66 37.17 24.76 30.23 31.86 29.9 24.04
52.99 26.84 8.93 16.82 7.63 13.67 9.84 32.39 49.1 115.41 68.23 66.16 300.06 3.54 0.07 208.4 13.71 8.48 69.43 0.0 5.52 0.0 35.17 19.01 101.37 77.32 10.54 4.22 35.41 16.04 39.69 35.04
2.43 1.45 1.04 0.7 0.71 0.64 0.2 0.89 0.32 0.48 0.84 0.83 2.88 0.04 0.0 1.59 0.28 0.59 0.49 0.0 0.0 0.0 1.66 3.49 1.39 0.82 0.81 1.4 0.72 0.51 0.82 0.57
0.18 0.14 0.22 0.29 0.11 0.1 0.0 0.02 0.15 0.12 0.22 0.12 109.33 0.73 2.12 0.89 13.33 6.43 2.46 1.13 1.57 0.0 18.77 22.63 29.58 0.73 0.2 0.0 3.62 3.59 1.62 1.62
236.43 142.79 119.85 102.43 110.23 106.58 49.74 64.75 56.88 73.97 85.01 78.23 394.14 27.53 13.29 185.12 130.82 84.21 22.88 2.09 22.87 0.9 160.93 174.51 19.58 8.45 12.65 12.58 89.86 69.52 29.63 27.13
14.09 6.19 9.85 9.1 14.97 12.63 12.27 18.29 20.59 14.93 18.8 10.76 61.28 15.66 8.25 9.29 20.87 24.41 97.22 0.0 0.0 0.0 50.16 69.25 1.66 12.58 7.14 4.17 39.45 54.48 21.66 33.22
19.03 26.14 41.46 47.32 44.1 37.17 60.53 60.6 56.03 51.74 40.96 29.86 27.68 31.15 5.58 39.22 32.99 20.89 36.57 26.8 6.5 0.07 75.48 55.65 23.47 26.37 13.93 16.59 41.71 37.7 20.98 17.9
21.08 26.89 25.0 23.3 24.72 23.35 22.68 20.18 21.01 28.09 25.26 26.21 50.95 10.6 9.59 43.9 16.77 20.96 42.72 4.2 4.27 0.0 69.58 19.41 10.16 13.17 10.35 13.52 19.97 21.66 15.87 16.26
1.27 0.81 1.82 3.73 2.25 4.12 1.65 2.23 3.87 4.16 0.87 2.24 7.18 1.87 0.79 7.28 3.44 5.12 1.08 0.0 0.0 0.0 17.09 6.95 0.43 5.36 4.37 3.86 3.97 2.52 1.58 1.95
2.38 0.5 2.0 1.53 1.64 1.17 0.82 0.74 0.66 2.87 1.65 1.76 135.36 0.19 0.06 23.35 0.23 3.89 1.42 0.0 0.0 0.0 7.84 59.28 0.32 1.03 0.39 0.44 2.45 7.05 5.91 4.58
64.94 65.16 66.86 63.2 54.63 65.27 82.4 59.7 69.13 81.82 87.44 70.05 75.6 61.98 46.65 74.76 53.54 46.42 48.19 49.55 32.46 41.58 141.77 92.44 33.36 27.39 20.51 21.92 51.59 57.45 45.18 48.75
3.37 1.56 3.3 3.62 2.01 5.72 5.51 1.84 9.95 1.39 2.46 3.42 21.68 3.83 1.77 10.33 11.98 17.6 5.05 0.0 0.0 0.0 36.98 9.38 1.21 0.63 1.45 0.0 14.41 11.75 11.31 8.72
7.59 11.15 11.05 9.38 9.39 4.95 5.69 6.7 5.5 9.7 9.51 10.34 42.75 0.83 0.12 17.83 4.6 3.39 4.29 1.59 0.65 0.0 21.78 7.74 2.6 9.44 4.0 5.27 3.28 2.73 3.7 5.36
0.06 0.17 0.05 0.14 0.13 0.28 0.32 0.58 0.24 0.31 0.12 0.12 0.74 0.0 0.04 0.53 0.19 0.47 0.1 0.0 0.0 0.0 1.01 1.66 0.0 0.06 0.09 0.15 0.18 0.1 0.0 0.09
26.61 14.34 13.23 13.7 14.61 15.36 4.74 12.67 17.39 23.82 19.81 12.16 132.99 7.19 0.0 58.4 1.39 5.78 0.58 0.0 0.0 0.0 77.53 130.9 4.61 11.98 12.27 12.24 6.5 9.95 5.71 4.31
1.06 1.53 2.42 2.26 0.81 1.41 2.72 1.99 1.7 2.8 3.3 3.29 17.88 0.3 0.08 10.26 2.24 2.65 2.0 0.0 1.2 0.0 8.98 2.67 1.76 5.31 1.57 1.72 1.66 2.26 1.15 2.03
7.5 6.19 7.21 7.03 6.76 7.73 5.47 7.83 11.43 6.72 14.7 11.03 15.81 8.4 1.48 6.62 6.47 13.25 1.0 0.0 0.0 0.0 26.9 7.53 2.17 2.36 1.66 1.17 5.48 5.6 6.88 6.48
6.05 8.11 10.24 8.81 8.32 8.41 9.26 7.67 9.07 7.63 9.16 6.83 35.26 3.61 0.13 14.43 8.92 8.48 28.78 0.0 0.0 0.0 56.03 12.96 0.29 5.11 4.67 5.3 7.65 8.03 9.31 10.19
10.31 7.97 7.77 8.2 7.93 9.81 6.09 7.53 6.87 9.8 8.97 7.97 35.92 19.55 1.82 28.23 8.53 11.24 9.51 2.27 0.13 0.0 37.1 38.44 0.53 1.93 5.59 5.45 10.98 11.96 12.96 20.27
6.21 7.13 7.26 6.91 5.36 7.66 6.67 6.05 8.55 6.68 7.9 8.24 19.66 18.51 1.53 11.72 6.81 7.95 1.76 0.0 0.0 0.0 41.27 39.61 5.12 4.89 2.79 4.03 7.72 7.4 9.19 8.87

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)