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Heatmap: Cluster_61 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00163560 (evm_27.TU.AmTr_v1.0_scaffold00001.151)
 - - - - 0.34 - 2.56 - 1.61 2.55 -0.02 - - -0.25 -2.92 - - -0.4 -1.38 -0.88 0.44 -0.11
AMTR_s00002p00100480 (evm_27.TU.AmTr_v1.0_scaffold00002.57)
 - - - - - - 1.99 - 1.78 2.43 - - 2.83 - 1.07 - - - - - - -
AMTR_s00002p00100490 (evm_27.TU.AmTr_v1.0_scaffold00002.58)
 - - - - - - 3.02 - 1.72 2.33 - - 0.94 -0.75 1.61 - - - - - - -
AMTR_s00002p00271950 (evm_27.TU.AmTr_v1.0_scaffold00002.650)
 - - - - - - 2.91 - - 3.86 - - - - - - - - - - - -
AMTR_s00004p00243820 (evm_27.TU.AmTr_v1.0_scaffold00004.235)
 - - - - 1.29 - 3.85 - 1.12 1.13 - - - -0.38 - - - - - - - -
AMTR_s00006p00259720 (evm_27.TU.AmTr_v1.0_scaffold00006.219)
 - - - - 2.61 - 1.57 0.36 1.25 1.47 0.51 1.34 -2.73 -0.11 0.35 - - - - -2.64 - -
AMTR_s00007p00144710 (evm_27.TU.AmTr_v1.0_scaffold00007.99)
 - - - - - - 4.46 - - - - - - - - - - - - - - -
AMTR_s00008p00136620 (evm_27.TU.AmTr_v1.0_scaffold00008.64)
 - - - - 2.42 - 2.73 - 0.93 1.25 - - 1.99 0.47 -1.37 - - - - - - -
AMTR_s00010p00126170 (evm_27.TU.AmTr_v1.0_scaffold00010.83)
 - - - 0.49 -0.7 - 2.89 - 1.46 1.79 -0.14 0.09 -0.19 -0.22 -0.91 - -0.61 - -2.85 -1.89 - 0.05
AMTR_s00011p00184340 (evm_27.TU.AmTr_v1.0_scaffold00011.54)
 - - - - - - 4.46 - - - - - - - - - - - - - - -
AMTR_s00011p00263640 (evm_27.TU.AmTr_v1.0_scaffold00011.205)
 - 0.6 - -0.68 -0.94 - 2.41 -0.0 1.46 1.24 0.29 0.4 -0.85 -0.18 -1.39 -1.17 0.88 -3.28 -2.58 -1.34 -2.3 -1.36
AMTR_s00012p00163050 (evm_27.TU.AmTr_v1.0_scaffold00012.98)
 - - - - - - 4.46 - - - - - - - - - - - - - - -
AMTR_s00012p00214540 (evm_27.TU.AmTr_v1.0_scaffold00012.156)
 - - - - - - 3.29 - 1.69 1.22 1.37 - - -0.26 1.71 - - - - - - -
AMTR_s00014p00175040 (evm_27.TU.AmTr_v1.0_scaffold00014.59)
 - - - - 1.3 - 3.38 - 2.25 2.13 - - - - - - - - - - - -
AMTR_s00014p00237110 (evm_27.TU.AmTr_v1.0_scaffold00014.102)
 - - - - 2.21 - 1.98 - 1.56 2.17 - - - - 0.88 - - - - 0.83 - 1.22
AMTR_s00017p00216830 (evm_27.TU.AmTr_v1.0_scaffold00017.155)
 - - - - - - 3.54 - 1.96 1.65 - - - 0.84 - - - - - - - 0.62
AMTR_s00019p00216540 (evm_27.TU.AmTr_v1.0_scaffold00019.265)
 - - - -8.01 0.55 - 2.65 -1.9 1.61 1.42 -2.77 -3.15 -0.86 1.98 0.57 -2.4 -2.79 -2.02 -1.62 0.05 -4.5 -4.97
AMTR_s00020p00249530 (evm_27.TU.AmTr_v1.0_scaffold00020.125)
 -1.32 -4.13 -2.58 -2.71 0.27 -2.47 2.14 -3.26 0.94 0.98 0.1 0.42 -0.09 0.89 0.03 -0.87 -1.3 -0.34 0.45 -0.27 -0.52 -0.83
AMTR_s00022p00078940 (evm_27.TU.AmTr_v1.0_scaffold00022.61)
 - - - - -0.99 - 3.17 - 2.02 2.71 -1.91 - - 0.09 - - - - - - - -0.87
AMTR_s00025p00052050 (evm_27.TU.AmTr_v1.0_scaffold00025.27)
 - - - - 2.09 - 1.8 - 0.61 1.93 - 2.25 - -0.61 -1.74 1.69 - - - - - -
AMTR_s00025p00227340 (evm_27.TU.AmTr_v1.0_scaffold00025.324)
 - - - - - - - - 0.47 - - - - 2.91 0.62 - 3.53 - - - - -
AMTR_s00027p00161110 (evm_27.TU.AmTr_v1.0_scaffold00027.51)
 - - - - 3.53 - 3.38 - - - - - - - - - - - - - - -
AMTR_s00027p00198110 (evm_27.TU.AmTr_v1.0_scaffold00027.65)
 - - - - - - 3.25 - - 3.11 - - 1.94 - - - - - - - - -
AMTR_s00028p00204690 (evm_27.TU.AmTr_v1.0_scaffold00028.91)
 - - - - -2.19 - 3.13 0.52 0.87 1.58 - - 0.22 0.93 -3.0 - -1.83 - -0.86 0.79 -0.04 -4.1
AMTR_s00029p00204210 (evm_27.TU.AmTr_v1.0_scaffold00029.291)
 - - - - -4.37 - 3.23 1.28 1.14 1.79 - - -0.55 0.98 -2.72 - - - - 0.69 - -4.05
AMTR_s00030p00235290 (evm_27.TU.AmTr_v1.0_scaffold00030.196)
 - - - - - - 3.17 - 2.25 2.71 - - - 0.75 - - - - - - - -
AMTR_s00033p00197520 (evm_27.TU.AmTr_v1.0_scaffold00033.160)
 0.83 0.92 0.0 -5.38 0.28 -3.27 1.75 -0.56 0.56 0.87 0.15 0.18 -0.23 0.05 -0.74 -0.73 -0.24 -0.82 -1.03 -0.97 -1.57 -0.8
AMTR_s00034p00144640 (evm_27.TU.AmTr_v1.0_scaffold00034.42)
 - - - - 3.31 - 2.73 - 1.16 1.66 - - - - - - - - - - - -
- - - - 2.31 - 0.97 - 1.51 1.68 - - -2.64 0.29 -0.58 - - - - 0.59 2.45 -
AMTR_s00040p00108040 (evm_27.TU.AmTr_v1.0_scaffold00040.77)
 - - - - 1.75 - 2.16 - 1.53 0.1 - - 2.65 0.0 0.1 - - - - 0.07 - -0.31
AMTR_s00040p00109870 (evm_27.TU.AmTr_v1.0_scaffold00040.79)
 - - - - 2.97 - 2.74 - 1.7 1.93 - - - -1.28 - - - - - - - -
AMTR_s00041p00086140 (evm_27.TU.AmTr_v1.0_scaffold00041.53)
 -0.34 -0.63 0.59 -1.1 0.37 0.04 1.31 -0.91 0.67 0.46 -0.14 0.0 -0.28 0.23 -0.16 -0.24 0.15 -0.33 -0.68 -0.64 -0.48 -0.43
AMTR_s00041p00206930 (evm_27.TU.AmTr_v1.0_scaffold00041.198)
 - - - - 3.1 - 3.47 - - 1.26 - - - - - - - - - - - -
AMTR_s00041p00213190 (evm_27.TU.AmTr_v1.0_scaffold00041.223)
 - - - - - - 3.52 - 1.86 2.63 - - - -0.51 - - - - - - - -
AMTR_s00041p00237940 (evm_27.TU.AmTr_v1.0_scaffold00041.302)
 - - - - 0.68 - 3.37 -0.33 1.86 1.16 -1.25 - -3.29 -0.52 -2.51 - - - - -1.79 - 0.76
AMTR_s00052p00082960 (evm_27.TU.AmTr_v1.0_scaffold00052.19)
 - - - - 2.61 - 2.41 - 1.16 1.72 - - 0.27 0.04 -0.05 - - - - 0.9 - -
AMTR_s00055p00059610 (evm_27.TU.AmTr_v1.0_scaffold00055.20)
 - - - - - - 3.64 - 2.12 1.21 - - - 0.95 -0.14 - - - - - - -
AMTR_s00055p00192650 (evm_27.TU.AmTr_v1.0_scaffold00055.127)
 - - - - - - - - - - - - - 4.46 - - - - - - - -
AMTR_s00059p00203460 (evm_27.TU.AmTr_v1.0_scaffold00059.228)
 - - - - 0.57 - 3.38 - 2.18 1.29 - - -1.87 -0.19 0.81 - - - - - - -1.97
AMTR_s00060p00073240 (evm_27.TU.AmTr_v1.0_scaffold00060.23)
 - - - - -0.11 - 4.05 - 1.26 0.27 - - - -0.2 - - - - - - - -
AMTR_s00066p00100930 (evm_27.TU.AmTr_v1.0_scaffold00066.82)
 -1.32 - - -7.64 -0.59 - 3.59 - 1.67 1.22 -3.66 -1.69 -4.05 1.13 -0.86 - -3.46 - -6.44 -5.65 -3.62 -5.07
AMTR_s00073p00081080 (evm_27.TU.AmTr_v1.0_scaffold00073.22)
 - - - - - - 3.93 - 1.35 1.6 - - - 0.14 -4.98 - - - - -4.61 - -4.98
AMTR_s00074p00199590 (evm_27.TU.AmTr_v1.0_scaffold00074.129)
 - - - - 2.3 - 3.42 - - - - - - 2.66 - - - - - - - -
AMTR_s00075p00168760 (evm_27.TU.AmTr_v1.0_scaffold00075.53)
 - - - - - - 4.46 - - - - - - - - - - - - - - -
AMTR_s00076p00017350 (evm_27.TU.AmTr_v1.0_scaffold00076.2)
 - - - - - - 4.11 - -0.11 1.91 - - - - - - - - - - - -
AMTR_s00076p00121100 (evm_27.TU.AmTr_v1.0_scaffold00076.40)
 - - - - 1.85 - 2.87 - 1.26 2.41 - - -1.33 -0.41 0.33 - - - - -0.1 - -
AMTR_s00085p00037620 (evm_27.TU.AmTr_v1.0_scaffold00085.13)
 - - - - 1.76 - 0.76 - 2.03 1.98 - - -1.06 2.14 0.57 0.27 - - -0.52 -3.3 - -0.99
AMTR_s00087p00171080 (evm_27.TU.AmTr_v1.0_scaffold00087.54)
 - - - - - - - - - - - - - 4.46 - - - - - - - -
AMTR_s00088p00132500 (evm_27.TU.AmTr_v1.0_scaffold00088.97)
 - - - - 0.05 - 3.41 - 2.39 2.34 - - - - - - - - - - - -
AMTR_s00095p00067920 (evm_27.TU.AmTr_v1.0_scaffold00095.36)
 - - - - 1.57 - 4.02 - 0.57 0.46 - - - - - - - - - - - -
AMTR_s00095p00163170 (evm_27.TU.AmTr_v1.0_scaffold00095.141)
 1.28 - - - -2.55 -2.47 3.4 0.93 1.19 1.1 - - - 1.19 -4.42 - - - - -4.89 - -6.91
AMTR_s00096p00098260 (evm_27.TU.AmTr_v1.0_scaffold00096.50)
 - - - - 2.89 - 1.99 - 0.27 2.98 - - - 0.62 - - - - - - - -
AMTR_s00099p00034920 (evm_27.TU.AmTr_v1.0_scaffold00099.19)
 - -1.05 -5.36 -8.72 -2.13 -1.21 1.81 -0.93 1.17 1.12 -0.48 -0.44 0.71 0.59 0.19 0.99 -0.18 0.33 0.05 -0.77 -1.73 -0.73
AMTR_s00100p00025590 (evm_27.TU.AmTr_v1.0_scaffold00100.3)
 -0.53 -1.15 0.44 -3.46 -0.45 -2.77 1.89 -3.68 0.79 0.53 0.02 0.17 -0.2 0.39 0.07 -0.11 0.1 -0.23 -0.44 0.03 -0.43 -0.22
AMTR_s00104p00120130 (evm_27.TU.AmTr_v1.0_scaffold00104.49)
 - - - - 1.55 - -0.12 - 2.14 1.4 -0.29 - 0.05 0.51 0.9 - -1.05 - - -1.51 2.24 -1.37
AMTR_s00104p00130640 (evm_27.TU.AmTr_v1.0_scaffold00104.58)
 - - - - 0.24 - 3.51 - 2.21 1.61 - - - 0.49 -1.65 - - - - - - -
AMTR_s00105p00127920 (evm_27.TU.AmTr_v1.0_scaffold00105.62)
 - -2.4 -1.37 - 0.11 - - - - - 0.27 0.45 1.43 2.24 0.4 - - - - -2.17 3.1 -2.33
AMTR_s00108p00141880 (evm_27.TU.AmTr_v1.0_scaffold00108.43)
 - - - - - - 2.77 - - 2.53 - - - 3.23 - - - - - - - -
AMTR_s00114p00022160 (evm_27.TU.AmTr_v1.0_scaffold00114.6)
 - - - - - - 3.27 - 3.27 1.42 - - - - - - - - - - - -
AMTR_s00114p00022200 (evm_27.TU.AmTr_v1.0_scaffold00114.7)
 - - - - - - 3.61 - 2.59 1.5 - - - -0.02 - - - - - - - -
AMTR_s00120p00110650 (evm_27.TU.AmTr_v1.0_scaffold00120.51)
 - - - - - - 3.74 - - 3.11 - - - - - - - - - - - -
AMTR_s00129p00117890 (evm_27.TU.AmTr_v1.0_scaffold00129.92)
 - - - - - - 3.89 - 1.88 0.68 - - - 0.88 - - - - - - - -
AMTR_s00139p00052040 (evm_27.TU.AmTr_v1.0_scaffold00139.6)
 - - - - 3.51 - 3.4 - - - - - - - - - - - - - - -
AMTR_s00139p00103050 (evm_27.TU.AmTr_v1.0_scaffold00139.20)
 - - - - - - 4.46 - - - - - - - - - - - - - - -
AMTR_s00153p00091070 (evm_27.TU.AmTr_v1.0_scaffold00153.53)
 - - - - - - 4.13 - 1.52 -0.67 - - - -0.06 - - - - - - - -
AMTR_s00173p00010570 (evm_27.TU.AmTr_v1.0_scaffold00173.1)
 - - - - 2.38 - 1.43 - 1.47 1.9 -0.01 1.77 - -1.33 0.28 - - - 0.42 - - -1.99
AMTR_s00194p00015150 (evm_27.TU.AmTr_v1.0_scaffold00194.3)
 - - - - - - 3.91 - 1.89 1.69 - - - - - - - - - - - -
AMTR_s00223p00017220 (evm_27.TU.AmTr_v1.0_scaffold00223.1)
 - - - - 1.39 - 3.56 - 1.79 1.32 - - - 0.68 - - - - - - - -
AMTR_s01798p00005570 (evm_27.TU.AmTr_v1.0_scaffold01798.2)
 - - - - - - - - - - - - -0.63 3.28 -1.28 - - - - - 3.37 -0.16
- - - - - - - - - - - - - 4.46 - - - - - - - -
AMTR_s03541p00007170 (evm_27.TU.AmTr_v1.0_scaffold03541.1)
 0.87 -1.2 1.55 -2.89 -2.7 -4.27 0.95 -0.65 0.74 0.37 -0.74 0.04 1.79 -0.32 -0.96 -2.53 -0.51 -1.15 -1.18 0.54 - 0.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.