Heatmap: Cluster_364 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.94 -1.27 -1.11 -0.95 -1.59 -1.87 -1.3 -0.94 -0.84 -0.81 -1.12 -0.96 -0.68 -1.58 -1.06 -0.37 -1.35 -4.04 3.96 -3.49 -2.61 -1.52 -1.54 -1.28 0.21 0.86 0.08 -0.07 -1.11 -1.29 -1.13 -0.88
-2.76 -2.71 -1.45 -0.99 -1.06 -0.77 -1.24 -1.73 -3.54 -3.43 -3.06 -3.2 -3.16 -1.22 -4.21 -0.43 -2.4 -3.37 4.37 - - - -1.86 -2.16 -2.62 -0.09 1.29 0.73 -2.81 -3.63 -2.42 -2.41

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.