Heatmap: Cluster_142 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.42 -0.32 -0.46 -0.01 0.12 -0.54 -0.67 -0.15 0.08 0.17 0.17 -0.49 -0.89 -0.86 0.48 -1.19 -0.1 -1.54 -0.71 - 1.31 1.7 0.42 0.92 1.2 -0.71 -0.59 0.63 -0.13 -0.32 -1.57 -1.12
-0.14 -0.23 0.12 0.0 0.24 0.08 -0.56 -0.54 -0.33 -0.67 -0.98 -0.76 0.6 0.18 0.51 0.92 -0.29 -0.12 1.32 -0.32 0.19 1.63 -0.04 -0.24 0.04 -1.18 -0.83 -0.52 -0.5 -0.54 -1.32 -1.13
-0.55 -0.85 -0.75 -0.54 -0.48 -0.54 -0.85 -0.41 -0.27 -0.43 -0.41 -0.16 0.07 0.26 -1.0 0.12 -0.73 -0.68 0.09 -0.05 1.77 1.59 -0.35 -0.07 0.88 0.19 0.24 -0.05 -0.48 -0.52 -0.34 -0.05
-0.84 -0.4 -0.11 -0.25 -0.17 -0.29 -0.06 0.05 -0.09 0.0 -0.01 -0.27 0.43 0.63 -0.32 0.3 -0.67 -0.33 -0.06 0.02 0.24 1.17 -0.01 0.19 0.34 0.36 0.06 0.07 -0.5 -0.41 -0.54 -0.39
-0.23 -0.13 -0.06 -0.11 0.06 0.09 -0.12 -0.13 -0.15 -0.23 -0.2 -0.32 0.41 0.11 0.45 0.43 -0.31 -0.73 -0.16 -0.29 0.51 1.03 -0.08 0.1 -0.09 0.14 0.22 0.21 -0.45 -0.35 -0.58 -0.51
-0.32 -0.29 -0.32 -0.02 -0.1 0.06 -0.32 -0.01 -0.04 -0.21 0.06 -0.37 0.39 0.94 -0.08 0.15 -0.61 -0.48 -0.33 -1.46 1.23 1.12 0.36 0.57 0.01 -0.16 -0.12 -0.02 -0.82 -0.84 -0.88 -0.67
- -4.35 - - - -4.99 -3.79 -1.63 -2.46 - - - - - -3.19 -5.59 - -3.61 -3.58 2.96 3.26 2.9 - -3.38 2.48 -1.4 - - -3.98 -5.03 -4.27 -6.14
0.23 -0.64 -0.71 -0.37 -1.72 -0.3 -0.96 -0.68 -0.05 -1.3 -0.41 -0.64 0.55 -1.18 1.93 0.07 -0.65 -1.43 1.16 -1.1 0.26 2.3 -1.47 -0.79 1.21 -0.29 -2.09 -1.08 -0.97 -0.04 -1.26 -1.01
-1.14 -1.44 -1.78 -1.21 -1.45 -1.24 -1.44 -1.18 -1.16 -0.99 -1.28 -0.96 -2.79 -2.76 -3.63 -2.02 0.24 0.47 -0.86 1.98 2.26 2.13 -0.44 -0.93 1.77 -2.06 -1.0 -1.03 0.4 0.17 -0.03 -0.27
-0.45 -0.61 -0.35 -0.46 -0.18 -0.41 -0.38 -0.23 -0.24 -0.59 -0.37 -0.67 -0.8 -1.39 -1.34 -0.35 -0.79 -0.46 0.02 1.17 1.91 1.99 -0.69 -0.42 0.97 0.12 -0.72 -0.44 -0.58 -0.31 -0.97 -0.45
-0.24 -0.54 -0.8 -0.62 -0.63 -0.3 -0.3 -0.03 0.01 -0.07 -0.27 -0.32 0.67 0.98 0.62 0.89 -0.6 -1.13 0.1 0.61 0.04 1.8 -0.54 -0.5 -1.36 -0.36 -0.58 -0.8 -0.53 -0.17 -0.04 -0.23
-0.49 -0.66 -0.84 -0.58 -0.39 -0.37 -0.68 -0.25 -0.27 -0.4 -0.29 -0.55 -0.04 -0.34 -0.64 0.19 -1.08 -0.9 -0.59 0.49 2.15 1.9 -0.63 -0.51 1.33 0.12 -0.48 -0.72 -0.72 -0.74 -0.83 -1.0
-0.6 -0.6 -1.02 -0.63 -0.55 0.0 -0.31 -0.14 0.23 0.54 0.12 -0.37 0.15 -0.27 0.79 0.34 -0.94 -0.43 0.29 -1.17 -2.31 2.01 -0.29 -0.33 -0.38 -0.17 0.25 0.47 -0.39 -0.23 -0.1 0.19
-2.76 -2.1 -1.5 -1.46 -1.15 -1.18 -0.57 -0.64 -0.95 -0.48 -1.09 -2.21 -0.59 -1.25 -0.04 -2.17 -1.02 -0.53 -0.03 -0.99 2.45 1.31 -1.96 -0.07 1.54 0.71 1.47 1.09 -0.99 -0.23 -0.03 -0.19
-0.68 -0.86 -1.16 -0.3 -0.91 -0.48 -0.46 -1.19 -0.41 0.05 -0.82 0.13 -2.37 -0.94 -0.9 -0.69 -0.92 -0.53 0.39 -2.91 1.03 2.7 0.08 0.52 1.64 -1.55 -1.21 -0.63 0.24 0.17 -0.54 -0.71
-1.3 -1.4 -2.47 -1.29 -0.41 0.67 0.78 0.65 0.48 0.1 -0.45 -0.87 -2.46 -3.07 -0.13 -1.9 -0.79 -0.03 -0.59 1.56 2.01 1.56 -0.9 -1.05 0.08 -1.82 0.19 0.08 -0.13 -0.12 -0.4 -1.01
-0.32 -1.1 -1.25 -0.81 -0.52 -0.45 -0.14 0.18 0.04 -0.22 -0.55 -0.29 -0.6 -0.98 0.95 -0.66 -1.03 -0.92 0.45 0.02 0.81 2.41 -0.83 -0.38 -0.1 -0.12 -0.58 -1.26 -0.52 -0.52 0.75 0.44
-0.61 -0.83 -1.0 -0.64 -1.46 -1.04 -1.34 -1.59 -1.21 -1.04 -1.57 -0.94 -0.08 -0.8 -0.57 0.06 -0.49 -0.54 0.11 2.02 1.75 2.25 -0.16 -0.22 1.39 -1.46 -1.69 -1.9 -0.46 -0.44 -0.41 -0.16
-0.3 -0.42 -0.13 -0.27 -0.09 0.11 -0.21 -0.03 0.0 -0.02 -0.23 -0.19 -0.33 -0.66 -0.27 -0.06 -0.61 -0.13 -0.09 0.39 1.35 0.46 -0.06 -0.04 1.24 -0.05 -0.01 -0.3 -0.57 -0.53 -0.28 -0.15
-0.3 -0.46 -0.55 -0.41 -0.55 -0.44 -0.39 -0.39 -0.23 -0.47 -0.31 -0.42 0.15 -0.16 -0.03 0.41 -0.3 0.14 0.41 -1.29 1.22 0.98 0.02 0.1 1.0 0.42 -0.01 -0.28 -0.02 -0.05 -0.41 -0.47
-2.9 - 0.94 - - - - -0.71 -1.34 -2.05 - - - -2.62 -3.12 - -2.37 2.59 2.5 - - 4.01 - -2.28 - - - - - - - -2.49
-1.26 -1.84 -1.95 -1.05 0.03 -0.1 -0.08 0.79 0.3 -0.26 -0.98 -0.53 -2.62 -3.97 -1.57 -2.41 -1.22 -0.07 -1.34 -0.38 2.58 2.87 -1.02 -1.97 0.4 -2.28 -1.23 -0.34 -0.34 -0.46 -0.63 -1.28
-0.4 -0.64 -1.07 -0.82 -0.58 -0.78 -0.59 -0.32 -0.16 -0.18 -0.07 -0.4 -1.27 -0.55 0.4 -1.01 -1.82 -1.74 -0.81 0.74 1.36 1.92 -1.2 -0.96 1.76 1.45 0.55 0.38 -1.6 -1.51 -1.44 -1.45
-1.28 -1.22 -1.11 -0.51 -0.99 -1.31 -1.28 -0.63 -1.12 0.71 -0.45 -1.09 1.5 1.19 1.5 1.4 -2.68 -4.19 -0.01 -0.48 -4.42 2.72 -1.03 -0.25 -0.37 -0.33 0.1 -0.94 -1.98 -1.54 -2.16 -1.84
-0.51 -0.3 -0.95 -0.37 -0.38 -0.41 -0.19 -0.45 0.07 0.01 -0.01 -0.15 -1.14 -0.52 0.34 -0.83 -0.96 -2.32 -0.35 1.01 0.33 1.55 -0.45 -0.41 1.4 0.88 0.55 0.31 -0.93 -0.39 -0.55 -0.34
-0.33 -0.35 -0.5 -0.24 -0.44 -0.28 -0.42 0.28 0.16 0.09 0.16 -0.11 0.01 -0.19 0.07 0.13 -0.48 -0.71 0.0 -0.05 1.06 0.83 -0.19 -0.27 0.29 0.6 0.2 0.27 -0.48 -0.28 -0.32 -0.34
-0.56 -1.6 0.78 -0.38 -0.88 -1.04 -0.45 -1.16 -0.57 -0.56 -1.28 -1.51 -1.42 -1.21 -0.5 -1.34 -2.25 3.17 -3.37 -0.24 -3.08 3.27 -2.71 -2.75 - -2.35 -0.68 -0.59 -2.16 -2.05 -3.41 -
-0.66 -1.76 -0.84 -1.61 -1.62 -1.39 -1.09 -1.55 -1.79 -0.91 -1.26 -0.79 0.55 -0.61 1.73 1.9 -1.54 -0.92 1.21 -3.36 -1.77 2.58 -1.03 0.54 -0.4 0.4 -0.09 -1.09 -0.14 -0.09 -1.04 -1.54
-0.63 -0.69 -0.86 -0.22 -0.27 0.18 0.26 0.16 0.15 0.16 0.22 -0.14 -1.38 -0.68 -1.05 -1.09 -0.76 -1.03 -0.82 1.25 2.08 1.8 -0.56 -0.78 0.3 -1.58 -0.66 -0.68 -0.66 -0.68 -0.39 -0.12
-1.54 -1.09 -2.07 -1.38 -0.68 -1.08 -2.48 -2.07 -1.37 -1.44 -2.46 -1.72 1.36 1.79 -0.94 1.47 -0.98 -1.24 0.49 -0.81 0.58 3.02 -1.09 -0.79 1.23 -0.88 -1.07 -1.34 -1.21 -1.36 -2.42 -2.38
-1.98 0.16 -0.71 -2.83 -0.42 -0.47 -0.56 -1.77 -0.29 0.12 -0.73 -1.82 0.5 -2.88 -2.01 -0.02 -1.4 2.11 -1.26 -1.4 1.56 2.88 -0.44 -0.27 0.12 -2.23 -1.19 -0.45 -0.87 -0.79 -1.29 -1.03
- - -14.63 - - -3.79 - -3.43 -4.07 - - - -2.21 - -4.09 - - -5.9 - 2.94 2.97 3.16 - -2.45 2.68 -1.89 -3.35 - -4.16 -5.18 - -
-0.27 -0.11 -0.85 -0.7 -0.96 -0.38 -0.42 -1.43 -0.56 -0.87 -0.57 -0.98 0.08 -1.81 0.83 0.35 -0.1 -0.45 0.89 -1.84 1.57 1.12 -0.5 0.23 0.67 0.43 0.96 0.47 -0.5 0.13 -0.96 -1.14
0.19 -0.06 -0.3 -0.77 1.07 -1.27 0.11 -1.84 - -2.85 -0.71 -0.57 -0.87 - - 0.42 -0.03 0.17 -0.38 -0.64 2.85 2.06 -1.48 -1.7 0.5 -2.33 0.27 0.37 -1.06 -0.64 -2.06 -1.9
- - - - - - - - - - - - -1.67 -2.08 - - - 3.65 1.12 - - 2.48 - - 2.23 - - 2.69 - - - -
- -7.94 -6.9 -5.68 -7.85 -7.24 - -6.79 -7.86 -7.25 - -6.86 - -2.58 -2.72 -6.09 - -7.63 -8.34 2.19 3.15 3.36 - -8.38 2.88 -2.88 -2.31 -2.79 - - - -
-0.46 -0.33 -0.66 -0.3 -0.6 -0.25 -0.46 -0.36 -0.15 -0.15 -0.36 -0.29 -3.51 -1.6 -1.47 -3.37 -3.73 -4.25 -4.04 2.46 2.15 2.69 -3.73 -3.96 2.04 -1.85 -2.1 -2.05 -4.68 -4.75 -3.94 -4.54
- - - - -1.31 -1.95 -1.49 0.54 - -0.87 -2.53 -0.64 0.42 -0.22 - 2.96 -2.19 - -1.78 - - 3.44 -2.37 -0.75 0.45 -0.36 1.44 - -1.32 -1.31 -2.35 -2.41
-0.8 -0.51 -0.38 -1.35 -0.27 -0.34 -0.21 -0.89 -0.93 -0.46 -0.26 -0.8 -2.89 -3.81 -3.03 -2.57 -0.96 0.76 -2.15 1.61 3.01 2.15 -1.91 -2.49 1.66 -3.48 -2.59 -0.55 -1.46 -1.42 -4.04 -4.68
-0.58 -0.75 -0.83 -0.95 -1.03 -0.92 -0.85 -0.9 -1.13 -0.7 -0.82 -1.07 -0.35 -1.7 -0.37 -0.17 -0.61 -0.32 -0.12 2.09 1.84 1.73 -0.75 -0.5 1.25 -0.92 -0.41 -0.74 -0.23 -0.25 -0.0 -0.18
-1.23 -1.89 -1.51 -0.87 -1.64 -1.46 -1.2 -1.22 -1.43 -1.49 -1.27 -1.09 -0.23 -0.68 -0.84 -0.03 -1.07 0.56 0.59 0.06 2.13 2.03 -0.26 -0.16 1.55 0.77 -0.87 -0.42 0.26 0.14 -0.68 -0.56
-0.52 -1.24 0.13 -0.63 -4.79 -0.35 -0.81 -0.42 -2.24 -0.91 -0.01 -0.1 1.44 0.86 0.74 1.43 -1.52 0.5 1.13 -4.65 -3.51 2.18 0.02 -0.29 -1.36 0.38 -1.84 -1.03 -1.13 -0.5 -0.4 -0.71
-1.6 -1.8 -1.48 -1.24 -2.34 -1.55 -1.14 -0.52 -0.88 -1.01 -1.68 -1.43 -1.55 -2.56 0.24 -0.89 -0.2 0.24 0.5 2.23 2.22 2.26 -0.58 -0.55 0.5 -0.86 -1.18 -3.75 0.46 0.11 -1.1 -0.81
-1.45 -0.84 -0.83 -0.74 -1.28 -0.52 -0.77 -0.74 -0.5 -0.63 -1.0 -0.88 -4.06 -3.1 -2.39 -2.72 -1.55 -2.09 -1.05 2.78 2.57 2.41 -1.64 -1.45 1.3 -1.31 -2.51 -1.86 -1.08 -0.73 -2.37 -2.08
-0.35 -1.55 -1.28 -1.04 -1.69 -0.94 -0.56 -0.6 -0.73 -1.01 -0.27 -0.4 0.37 -0.48 -0.17 0.59 -0.35 0.77 0.3 -0.08 1.34 2.4 -0.16 0.21 0.6 -0.36 -1.29 -0.93 -0.66 -0.44 -0.59 -0.13
-0.91 -0.98 -0.95 -0.74 -0.84 -0.25 -0.05 0.17 0.44 0.41 0.07 0.05 -0.64 -0.48 0.53 -0.56 -0.43 -0.53 0.01 -0.15 1.49 2.06 -0.55 -0.51 0.26 0.02 -0.97 -0.93 -0.11 -0.14 -0.95 -0.38
-0.45 -0.7 -0.54 -0.65 -0.6 -0.99 -0.53 -0.6 -0.48 -0.58 -0.45 -0.24 0.04 -0.62 -1.25 0.41 -0.29 -0.14 0.66 -1.04 1.7 1.14 -0.3 -0.15 1.15 -0.26 -0.85 -1.35 0.48 0.38 0.59 0.31
-0.01 -0.44 -0.85 -0.3 -0.75 0.05 0.68 0.14 0.21 0.54 0.06 -0.04 -0.25 0.33 1.18 -0.26 -0.47 -0.46 -0.61 -4.1 -3.79 1.85 -0.44 -0.46 -0.16 -1.0 0.13 0.25 -0.43 -0.37 0.11 0.21
-0.71 -0.22 -0.26 -0.11 1.02 0.27 -0.21 0.27 0.06 0.09 -0.14 -0.16 -0.83 -0.89 0.32 0.31 -0.91 -1.79 -0.06 -0.31 1.88 1.26 -0.93 -0.58 1.7 -1.56 -0.84 -1.41 -0.9 -0.49 -2.35 -2.77
-0.84 -1.37 -1.38 -0.79 -0.98 -0.32 -0.49 -0.44 -0.28 0.02 -0.41 -0.3 -0.3 -0.44 0.22 -0.13 -0.76 -0.22 0.22 -0.35 1.7 2.12 -0.02 0.02 0.73 -0.1 -0.59 -0.68 -0.1 -0.26 -0.28 -0.25
0.18 -0.64 -1.03 -0.71 -0.97 -0.68 -0.88 -1.23 -0.83 -0.9 -1.08 -0.61 -1.19 -0.71 -1.19 -0.01 0.12 -0.16 1.15 -1.35 1.44 1.53 -0.12 -0.44 1.18 -0.66 0.47 0.22 0.31 0.68 0.51 -0.38
-0.31 -0.5 -0.36 -0.35 -0.19 0.03 -0.31 -0.21 -0.14 -0.24 -0.25 -0.48 -1.2 -1.02 -0.43 -1.03 -0.52 0.17 -0.7 1.55 1.97 1.91 -0.96 -0.96 0.97 -1.26 -0.84 -0.99 -0.75 -0.77 -0.93 -0.61

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.