1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_94 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.52 0.48 0.85 0.45 -1.28 -1.81 0.52 0.77 0.59 1.08 0.92 0.68 0.32 -0.96 -3.13 -0.49 -1.51 0.79 0.27 -5.12 -2.66 -6.36 -0.41 -0.03 -2.53 0.75 -1.81 -2.64 0.36 0.69 0.48 0.48
0.28 0.72 0.91 0.62 0.19 -0.07 0.75 0.82 0.95 1.06 1.07 1.13 0.73 -0.04 -1.11 0.37 -1.16 -1.56 -1.29 - -3.37 -4.57 -1.7 -1.2 -1.33 0.58 -0.01 -0.01 -1.08 -1.05 -2.02 -1.6
-0.43 0.63 1.08 0.88 -0.39 -0.63 0.77 1.09 0.95 1.19 0.94 0.58 1.28 -1.01 -1.76 -0.13 -1.87 -1.73 -1.22 -6.61 -3.48 - -0.44 -0.37 -4.51 0.93 -1.26 -1.92 -0.37 -0.52 -0.1 0.15
-1.05 0.22 0.24 0.24 -0.42 -0.53 0.78 0.65 0.59 0.86 0.69 0.7 1.13 -0.02 -0.93 -0.69 -1.1 -0.44 -0.17 -9.7 - - -0.47 -0.38 -6.37 -0.03 -1.98 -3.0 1.03 0.98 0.79 0.75
0.51 0.12 0.05 -0.11 -0.37 -0.6 0.11 0.66 0.87 1.04 0.97 0.95 0.1 -0.26 -1.41 -0.16 -0.57 -1.07 -0.59 -3.99 -2.8 -8.69 0.14 0.09 -1.91 0.18 -0.0 -0.5 -0.03 -0.08 0.55 0.84
0.83 1.75 1.66 1.38 -0.65 -1.96 0.71 1.2 0.39 1.15 1.22 1.98 -7.64 -8.57 -8.14 -6.95 -1.02 -3.26 -2.66 -4.24 -0.9 -5.44 -2.55 -5.42 -1.7 1.86 -2.34 -3.55 -1.43 -2.22 -3.89 -4.44
-0.29 1.14 1.42 1.39 -0.91 -1.82 0.99 1.5 0.12 0.21 0.13 1.03 -6.02 -8.52 -7.95 -6.35 0.26 -4.17 -2.04 -1.02 -3.29 -7.61 -0.73 -3.82 -0.17 2.91 -1.86 -1.97 -0.93 -2.32 -3.01 -3.58
0.04 1.04 1.33 1.15 0.78 0.62 0.96 0.83 0.68 0.74 0.61 0.51 0.23 -1.09 -3.0 -0.24 -1.51 -1.34 -1.25 -2.18 -0.34 -2.23 -0.68 -0.62 -2.43 0.52 -0.37 -0.15 -1.58 -1.9 -1.47 -1.17
0.21 0.19 0.34 0.29 -0.04 -0.01 0.22 0.33 0.4 0.63 0.54 0.55 0.22 -0.19 -1.48 0.29 -0.53 -0.68 0.03 -2.31 -0.41 -3.06 -0.2 -0.13 -2.06 0.47 -0.16 -0.37 -0.31 -0.35 0.73 0.74
0.33 0.1 0.19 0.02 0.42 0.08 0.07 0.11 0.6 0.33 0.64 0.35 0.05 0.25 -0.16 0.4 -0.09 -0.43 -0.22 -2.76 -0.79 -0.13 -0.27 -0.14 -2.35 0.47 0.01 -0.06 -0.19 0.05 -0.51 -0.2
0.49 0.18 0.24 0.22 -0.05 0.09 0.15 0.34 0.48 0.59 0.79 0.6 0.09 -0.74 -0.87 0.1 -0.64 -0.44 0.17 -4.76 -0.05 -4.42 -0.13 -0.12 -1.48 0.6 -0.22 -0.24 -0.45 -0.52 0.47 0.58
0.13 -0.09 -0.23 -0.28 -0.44 -0.56 0.01 0.88 1.0 1.21 1.02 0.85 -1.26 0.29 -2.82 -0.82 -0.78 -1.06 0.29 -5.83 -3.62 - -1.3 -1.46 -4.96 0.08 -1.18 -1.46 1.39 1.53 0.54 0.62
-0.66 -0.15 0.23 -0.3 -0.26 -0.23 0.26 0.78 0.74 1.04 0.69 0.5 -2.06 -0.38 -4.58 -0.63 -0.32 -1.28 0.7 -5.04 -2.28 - -1.21 -1.39 -2.72 -0.46 -0.45 -0.77 1.68 1.75 0.48 0.5
0.2 0.12 0.34 0.22 0.12 -0.12 0.39 0.68 0.91 1.06 0.82 0.58 1.08 0.58 -3.79 0.5 -0.26 -0.09 -1.24 -6.94 -3.86 -8.21 -1.11 -0.64 -4.0 -0.59 -1.52 -2.25 -0.08 0.01 0.68 0.92
-0.06 0.36 0.69 0.65 0.66 0.41 0.55 0.53 0.42 0.49 0.3 0.13 0.55 0.75 -3.82 -0.25 0.08 -0.05 -0.27 -2.46 -1.03 -5.18 -0.71 -0.83 -1.04 -0.7 -0.97 -1.29 -0.34 -0.42 0.53 0.93
0.95 1.38 1.41 1.24 -0.81 -1.2 0.69 1.35 0.79 1.58 1.51 1.93 - -4.32 -4.09 -5.09 -1.87 -3.86 -2.05 -5.19 - -2.24 -2.54 -5.47 -0.87 1.04 -1.06 -0.21 -1.83 -2.06 -2.4 -3.76
0.77 0.07 0.21 0.23 0.17 0.12 0.34 0.33 0.27 0.33 0.79 0.49 0.0 -0.5 -1.02 0.83 -0.58 -0.32 0.22 -3.02 -1.39 -2.1 -0.32 -0.12 -2.02 0.46 0.04 -0.38 -0.49 -0.54 0.5 0.35
-0.2 -0.16 -0.03 -0.31 -1.24 -2.0 0.87 1.01 1.1 1.46 1.22 1.29 -0.59 -0.75 -1.06 0.61 -1.16 0.6 -1.29 -3.91 -1.69 -5.69 -1.78 -2.2 -6.82 -1.44 -2.74 -2.83 0.84 0.34 0.98 1.02
0.43 1.29 1.06 0.97 0.72 0.34 0.07 -0.22 -0.01 0.51 0.13 0.61 -0.33 -3.83 -8.15 0.02 -0.35 0.49 0.65 -2.91 -7.8 - -0.15 -1.06 -1.74 0.49 -0.34 -0.45 0.3 0.33 -0.8 -0.19
0.15 -0.93 0.24 -0.05 -0.19 0.05 0.61 0.23 0.95 0.69 0.78 0.66 -4.91 -1.95 -1.82 -2.7 -0.54 -2.82 -0.25 -2.72 -1.79 - 0.58 -0.47 0.67 -0.5 -0.49 -0.54 1.67 1.68 -0.1 -0.59
0.37 0.75 0.59 0.23 -0.37 -0.62 0.39 0.27 0.73 1.05 1.06 1.2 1.02 0.32 -0.63 -0.32 -0.37 -0.56 -1.71 -5.08 -2.38 -4.53 -0.86 -1.13 -2.23 -0.55 -1.61 -1.77 -0.13 -0.22 0.74 0.68
-0.14 -0.16 -0.2 -0.19 -0.24 -0.28 0.29 0.57 0.81 0.83 0.76 0.5 -0.71 -1.32 -1.85 -0.55 -1.12 -0.41 0.51 -3.28 -1.44 -2.96 -0.6 -0.37 -2.34 1.4 -0.44 -0.72 0.2 -0.08 1.08 1.26
0.19 -0.24 -0.21 -0.19 -0.26 -0.61 0.86 0.45 0.67 0.8 0.95 0.79 -0.33 -0.15 -1.56 -0.17 -1.13 -0.9 0.08 -4.52 -2.52 -9.1 -1.18 -0.91 -2.43 1.01 0.3 0.19 0.13 0.17 0.97 0.76
-0.47 -0.65 -0.46 -0.7 -1.29 -0.52 0.4 0.05 0.63 1.02 0.71 0.2 -2.67 -1.47 -0.35 -1.77 -0.39 -0.39 -0.01 - 0.14 -1.29 0.41 -0.33 -0.4 -0.31 -0.23 -0.06 1.73 1.74 0.01 -0.54
0.48 0.22 -0.07 -0.02 -0.07 -0.07 0.3 0.38 0.47 0.63 0.66 0.69 -0.05 0.2 0.13 -0.11 -0.81 -0.5 -0.09 -2.26 -0.85 -2.38 -0.66 -0.51 -0.61 0.2 -0.46 -0.7 -0.21 -0.09 0.73 0.75
0.47 1.21 1.12 0.92 0.14 -0.15 0.54 0.17 0.15 0.32 0.25 0.78 -0.07 0.03 -1.77 0.06 -0.98 -0.98 -0.1 -1.3 -0.23 -1.95 -0.7 -0.91 -0.39 0.85 -1.36 -1.4 -0.31 -0.48 -0.51 -0.12
0.26 0.69 0.67 0.7 0.72 0.62 1.03 0.72 0.73 0.89 0.49 0.46 0.32 -0.15 -1.41 0.49 -1.38 -0.61 -0.15 -4.56 - -2.03 -0.25 -0.39 -3.53 0.34 -0.69 -0.99 -0.86 -0.8 -0.59 -0.33
0.36 -0.16 -0.15 -0.39 -0.96 -1.27 0.36 0.75 0.7 1.26 1.37 1.39 -0.11 -0.73 -3.74 -0.18 -1.1 -0.41 0.21 -6.85 -5.61 - -0.65 -0.81 -5.28 -0.07 -2.21 -2.78 0.76 1.05 0.8 1.06
-0.82 0.57 1.55 1.34 -1.18 -2.64 1.19 1.62 0.9 1.19 0.89 0.38 1.56 -0.82 -2.32 -3.0 -3.02 -2.04 -2.19 -5.0 -7.97 - -0.95 -0.89 -7.21 1.28 -1.72 -4.03 -1.35 -1.59 -0.02 0.25
-0.46 -0.27 -0.18 -0.06 -0.44 -0.18 0.51 0.82 0.94 1.02 0.88 0.76 0.22 0.01 -0.23 -0.1 -0.68 -0.33 -0.4 -5.22 -5.67 - -0.65 -0.68 -2.54 0.48 -0.54 -0.73 0.49 0.29 0.68 0.84
-1.01 -0.34 0.16 0.43 0.04 -0.36 0.98 0.84 0.7 0.91 0.86 0.79 0.2 -0.66 -0.27 -0.09 -1.01 -1.08 -0.32 -3.63 -7.97 -8.09 -0.58 -0.58 -4.53 1.12 -0.98 -1.01 0.14 0.34 0.62 0.8
0.28 0.71 1.42 1.24 0.73 0.11 1.37 1.34 1.26 1.31 1.48 1.16 - -0.4 0.85 -4.31 -1.44 -5.13 -4.26 -4.7 -2.97 -4.2 -3.13 -3.87 -2.37 -0.71 -0.65 -0.58 -1.64 -2.39 -2.92 -2.87
0.62 1.49 0.83 1.02 1.04 0.53 0.15 -0.52 -0.34 0.81 0.38 0.3 -3.3 -1.52 -4.92 -0.64 0.47 -0.37 0.52 - - - -0.67 -0.07 -2.06 0.89 -1.19 -0.25 0.55 0.14 -0.48 -0.92
-0.94 0.79 1.23 1.05 -0.43 -0.98 1.07 0.87 0.7 1.04 0.81 0.99 -1.08 1.14 -0.86 -0.8 -1.52 -0.82 -2.03 -6.8 -5.24 -0.57 -1.0 -0.82 -5.25 0.77 -1.86 -2.72 -1.64 -1.45 1.03 0.14
0.85 1.52 1.8 1.53 -0.31 -0.97 1.08 1.33 0.83 1.52 1.49 1.44 -3.54 -6.79 - -5.01 -0.97 -4.35 -3.16 -5.79 - -1.8 -2.21 -4.19 -4.53 1.04 -2.44 -2.5 -1.24 -2.2 -2.08 -2.73
-0.05 1.01 1.02 0.85 0.57 0.18 0.88 0.2 -0.22 -0.38 -0.58 -0.41 0.08 -0.66 -0.93 0.39 -0.11 -0.3 0.23 -1.87 -3.01 -3.87 0.19 0.06 -2.62 0.83 0.62 0.77 -0.75 -0.56 -1.09 -0.91
0.6 0.17 0.08 0.3 0.04 0.0 -0.17 0.29 0.59 0.59 0.69 0.62 -0.04 -0.84 -1.37 0.12 -0.56 -1.08 -0.2 -1.65 -0.32 -0.68 -0.28 -0.27 -2.44 0.99 0.12 -0.11 -0.12 -0.11 0.2 0.22
0.23 0.05 0.1 -0.03 -0.02 -0.02 -0.17 0.09 0.33 0.42 0.5 0.33 0.07 0.33 -0.16 0.24 -0.69 -0.21 -0.2 -0.96 -0.83 0.19 0.01 0.09 -0.62 0.57 -0.22 -0.39 -0.51 -0.42 0.0 0.38
0.32 0.58 0.55 0.37 0.64 0.47 0.23 1.23 1.17 1.11 1.22 0.87 0.14 -0.43 -1.69 0.49 -1.47 -0.93 -0.02 - - - -1.1 -0.7 -0.94 0.53 -1.07 -0.69 -0.81 -0.63 -1.14 -2.29
0.36 0.06 0.06 -0.09 -0.06 -0.06 0.0 0.12 0.47 0.64 0.66 0.5 -0.01 0.58 0.45 0.33 -0.04 -0.71 -0.2 -0.67 -2.11 0.21 -0.38 -0.39 -1.91 0.62 -0.51 -0.66 -0.2 -0.08 -0.25 -0.24
0.11 0.09 0.05 0.03 0.03 -0.08 0.33 0.19 0.48 0.55 0.48 0.36 0.19 0.11 -0.68 0.25 -0.7 -0.89 0.09 -1.58 -0.66 -1.45 -0.23 0.05 -1.44 0.77 -0.03 -0.31 -0.17 -0.11 0.48 0.42
0.49 0.39 0.17 0.1 -0.24 -0.32 0.12 0.22 0.64 0.92 0.82 0.89 -0.17 0.49 -1.04 -0.34 -1.1 -0.59 0.36 -3.66 -1.42 -5.6 -0.4 -0.21 -2.13 0.08 -0.93 -1.26 0.11 -0.1 0.88 0.96
-0.95 0.61 1.12 1.18 0.66 0.2 1.22 0.88 0.44 0.44 -0.06 -0.33 0.17 -1.56 -1.41 0.3 -0.96 -0.79 0.25 -7.13 -4.1 - -0.44 -0.62 -4.02 0.76 -0.41 -0.48 -0.36 -0.02 -0.04 0.48
0.36 1.04 1.03 0.84 0.12 -0.24 0.81 0.83 0.88 1.28 0.97 1.09 0.33 -1.13 -1.69 -0.17 -2.09 -1.07 -0.97 -5.98 -3.24 -7.04 -0.36 -0.33 -4.27 0.07 -1.58 -1.85 -0.1 -0.25 -0.44 -0.08
0.08 0.21 0.57 0.51 0.08 -0.32 0.76 0.46 0.7 1.04 0.89 1.09 0.67 -0.01 -0.81 1.09 -0.6 -1.95 -0.82 -2.38 -2.2 -2.66 -0.25 -0.01 -2.82 0.11 -2.12 -2.01 -0.33 -0.51 -0.28 0.12
-0.69 0.09 0.53 0.53 -0.87 -0.73 0.32 0.53 0.76 1.07 0.71 0.79 0.87 0.08 -0.09 0.33 -1.07 -0.85 -0.35 -6.06 -3.18 -5.94 -0.9 -1.08 -2.91 0.56 -1.39 -1.5 0.06 -0.12 0.92 1.13
-0.78 0.12 0.7 0.6 -0.09 -0.52 1.09 1.08 0.94 1.14 0.91 0.87 0.88 -0.55 -1.91 0.73 -1.48 -1.53 -0.69 -5.92 -3.23 -5.01 -0.94 -0.76 -3.0 1.09 -0.85 -1.23 -0.42 -0.41 -0.42 -0.07
-0.71 0.67 1.34 1.07 0.09 -0.28 0.73 1.19 0.76 1.09 0.92 0.67 0.71 0.32 -3.42 -0.23 -2.61 -1.27 -0.73 - -5.87 - -0.66 0.2 -4.58 0.94 -0.6 -1.61 -2.2 -2.22 -0.25 -0.02
-0.16 -0.09 -0.06 -0.14 -0.27 -0.23 0.2 0.36 0.33 0.49 0.49 0.31 0.53 0.05 -0.99 0.18 -0.12 -0.42 0.43 -0.8 -0.49 -1.4 -0.39 -0.38 -1.41 0.35 -0.64 -0.69 0.75 0.67 0.1 0.38
0.2 0.02 -0.01 -0.08 -0.12 -0.12 -0.05 0.18 0.38 0.48 0.55 0.35 -0.02 -0.13 -0.6 0.57 -0.91 -0.63 0.1 -1.85 -1.07 -2.06 0.13 0.57 -2.5 1.08 -0.69 -0.64 -0.34 -0.32 0.81 0.82
-0.38 -0.41 -0.09 -0.21 -0.12 -0.22 0.45 0.35 0.54 0.63 0.55 0.26 -0.84 -0.51 0.3 -0.35 -0.21 -0.34 -0.1 -1.6 -1.62 -3.01 -0.35 -0.17 -1.9 0.98 0.22 0.29 0.13 0.17 0.83 0.73
0.08 0.51 0.32 0.31 -0.41 -0.56 0.31 0.27 0.62 1.01 0.94 1.14 0.32 0.2 -0.31 0.62 -0.5 0.21 -0.31 -4.49 -1.56 -3.9 -0.01 -0.25 -2.7 -0.41 -0.98 -1.16 -0.35 -0.65 0.16 0.48
0.22 1.33 1.52 1.52 -0.9 -2.66 1.55 1.42 0.75 0.74 0.9 1.51 - - - - - -1.76 -3.32 -2.02 -1.65 -2.68 -5.7 - -0.14 2.48 -4.04 -1.85 -4.73 -3.48 -3.24 -5.09
0.29 0.21 0.28 0.07 0.05 0.01 0.29 0.27 0.4 0.52 0.56 0.48 -0.04 0.1 -0.13 0.13 -0.75 -1.03 0.1 -1.85 -0.08 -2.82 -0.38 -0.22 -0.51 0.95 0.01 0.1 -0.43 -0.46 -0.22 0.02
0.55 0.64 0.62 0.72 0.37 0.3 1.0 1.06 1.18 1.5 0.93 1.1 1.11 -1.4 -2.42 0.31 -0.98 -1.75 -2.29 -6.25 -2.9 -5.1 -1.01 -1.13 -3.18 0.27 -1.45 -1.18 -0.75 -1.05 -1.6 -1.31
0.24 0.98 1.52 1.45 -1.5 -3.04 0.92 1.58 0.3 0.89 0.91 1.22 - - - -6.18 -0.16 -0.95 -5.03 -3.82 -5.05 -5.07 -0.13 -3.75 -1.46 2.74 -3.7 -1.64 -1.17 -3.18 -6.48 -5.01
0.16 0.19 0.22 0.14 0.12 0.17 0.18 0.36 0.22 0.32 0.36 0.28 0.29 -0.1 -0.25 0.35 -0.69 -0.66 -0.02 -2.46 -0.61 -3.79 -0.44 -0.26 -0.27 0.68 0.39 0.34 -0.17 -0.11 0.05 0.11
0.13 0.72 0.75 0.83 0.41 0.15 0.67 0.4 0.35 0.65 0.49 0.74 -0.23 -0.97 -0.08 -0.12 -0.88 -0.71 -0.51 -0.69 0.05 -2.07 -0.74 -0.55 -1.2 0.33 -0.9 -0.76 -0.24 -0.26 -0.28 -0.08
-1.16 0.52 0.7 0.65 -0.67 -1.36 0.78 0.59 -0.41 0.22 0.12 0.37 -6.51 -8.92 -9.91 -5.62 1.18 -2.27 -1.81 -3.07 0.09 -5.45 0.07 -4.05 1.54 2.74 -0.19 -0.61 0.35 -0.87 -2.29 -2.76
-0.4 0.38 0.8 0.7 -0.19 0.21 1.39 0.64 0.17 0.44 0.43 0.55 -0.0 -0.58 -1.06 0.81 -1.09 -0.32 0.16 - - - -1.35 -1.28 - 0.77 -0.14 -0.17 0.5 0.77 -0.63 -0.47

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.