Heatmap: Cluster_227 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-2.26 - -1.16 -0.8 1.74 - - - -0.82 -0.99 - - 1.03 - 0.28 - - 1.14 4.17 - - - 0.24 -0.77 - - - - -0.84 - -0.73 -
-0.92 -1.92 -0.41 -1.27 0.92 -3.51 -0.5 0.13 -0.58 -0.92 -0.91 - 1.09 -2.73 0.92 0.06 -0.94 -0.09 3.5 - - - -1.17 -1.58 - -0.69 -0.25 0.57 -1.06 -0.11 -0.73 -0.3
-1.26 - -1.86 0.57 0.54 1.16 0.37 -17.26 -0.72 0.16 0.12 -1.01 0.52 0.22 -0.6 0.84 -1.52 0.25 3.53 -1.55 - - -1.31 -3.22 - -0.98 0.27 - -2.91 -2.67 -2.1 -1.91
-2.84 - - - 2.28 - - - - - - - -1.29 -1.4 -0.02 0.36 - 0.85 4.42 - - - - - - -0.31 - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.