Heatmap: Cluster_214 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.61 -1.26 -1.18 -0.81 -0.66 0.92 0.81 1.1 0.41 0.82 0.5 -0.23 -2.31 -3.86 -0.05 -2.09 -0.16 -0.43 -0.37 -1.64 - -0.87 -0.33 -0.78 0.1 0.05 1.11 1.08 0.46 0.56 0.68 0.22
0.1 0.15 0.08 0.2 0.38 0.23 0.19 0.23 0.11 0.06 0.04 -0.05 -0.68 -0.72 0.2 -0.54 -0.75 -1.17 -0.18 -0.98 0.54 -1.39 -0.57 -0.48 0.31 0.77 1.12 1.23 -0.91 -0.84 -0.6 -0.39
-0.14 0.12 0.23 0.13 0.03 0.18 0.19 0.26 0.19 0.28 0.15 0.04 -0.08 -0.6 -0.56 0.1 -0.58 -0.97 0.09 -0.02 0.06 -1.18 -0.58 -0.56 0.62 0.87 0.54 0.7 -0.4 -0.31 -0.65 -0.52
-0.51 -0.3 -2.28 -0.47 -0.54 1.31 0.93 1.26 0.81 0.56 0.34 0.23 -1.88 -2.85 0.11 -1.34 -0.38 -0.5 -0.4 - -4.03 - -0.48 -0.73 -2.84 0.4 1.35 1.27 -0.01 0.01 0.56 0.05
0.22 0.06 -0.13 0.12 0.23 0.06 -0.12 0.03 -0.25 -0.23 -0.24 -0.03 -0.64 -0.68 -0.47 0.03 -0.42 -1.18 0.16 0.05 0.81 -1.6 -0.33 -0.45 0.5 0.84 0.96 1.02 -0.39 -0.24 -0.62 -0.48
-1.35 -0.95 -1.91 0.24 -0.31 -0.62 0.48 0.15 -0.87 0.43 0.39 0.28 -0.91 -1.37 -0.1 -1.86 -0.99 -0.55 -1.42 -0.83 1.58 0.51 -0.59 -1.22 0.76 1.33 0.66 1.88 -0.75 -1.23 -1.26 -0.76
- - - - - - - - - - - - - -3.49 - -3.06 -1.02 -1.09 2.33 -1.62 1.62 - 0.2 0.54 2.99 1.6 1.85 1.72 -0.66 -0.23 -3.13 -1.62
-0.02 -0.04 -0.04 -0.15 -0.15 -0.06 -0.11 0.01 0.09 0.22 0.08 0.04 -0.03 -0.51 -0.1 0.08 -0.91 -1.01 -0.11 -0.39 1.61 -1.89 -0.77 -0.65 0.87 0.76 0.45 0.49 -0.68 -0.51 -0.34 -0.51
-0.12 -0.23 -0.33 -0.01 0.13 0.12 -0.42 -0.16 0.11 -0.16 -0.02 -0.18 0.4 0.34 0.4 0.37 -0.29 -0.62 0.1 -8.06 0.31 -0.21 -0.15 0.04 0.26 0.46 0.89 0.76 -0.5 -0.46 -0.63 -0.36
-0.73 -0.45 -0.3 -0.1 0.68 0.92 0.75 0.77 0.26 -0.04 -0.33 -0.47 -2.42 -1.66 -0.18 -1.04 -1.29 -1.11 -1.42 0.14 0.84 -0.57 -0.71 -0.58 0.72 1.7 0.89 0.91 -1.25 -0.93 -1.08 -1.55
0.92 0.97 -0.32 1.04 0.11 1.06 -0.3 0.37 0.32 0.25 0.86 0.92 -15.84 -2.84 -4.41 -3.54 -3.11 -1.89 -1.05 - -4.75 - -2.99 -1.87 -0.3 2.3 1.62 1.48 -2.4 -2.31 -2.18 -3.26
0.2 -0.11 -0.29 -0.12 -0.07 0.16 -0.06 0.21 0.16 0.07 -0.07 -0.25 -0.07 -0.28 0.01 0.1 -0.35 -0.73 0.38 -1.53 0.41 -0.3 -0.4 -0.37 0.21 1.0 0.94 0.64 -0.18 -0.33 -0.86 -0.77
-0.11 -0.0 -0.08 0.16 0.27 0.04 0.0 0.02 0.12 -0.0 -0.07 -0.1 0.18 -0.7 0.17 0.23 -0.49 -1.46 0.08 -0.69 0.2 -0.07 -0.19 -0.02 0.46 1.17 0.37 0.54 -0.45 -0.47 -0.79 -0.67
-2.16 -2.41 -2.62 -1.26 -2.14 0.83 0.44 0.81 0.77 0.92 0.18 -0.3 - - -1.89 - -0.18 - -0.59 - 1.69 - -2.04 -0.17 - 1.67 1.77 1.62 1.45 0.15 -2.21 -1.26
-0.22 0.11 0.57 0.77 0.34 0.49 0.91 0.92 0.79 0.36 0.04 -0.12 -2.25 -0.03 0.88 -2.38 -1.68 -0.42 -2.09 -1.56 -1.71 - -1.85 -2.7 0.53 0.63 1.24 1.86 -2.04 -1.75 -2.45 -2.52
-0.12 -0.18 0.04 0.1 0.11 -0.04 -0.13 0.09 -0.03 0.24 0.13 0.01 0.19 0.14 0.03 0.41 -0.61 -3.55 -0.39 -3.5 -0.09 0.14 -0.66 -0.64 0.94 1.29 0.79 0.71 -0.79 -0.92 -0.48 -0.39
-0.28 -0.22 -0.23 -0.14 0.11 -0.11 -0.1 0.04 -0.02 0.17 -0.08 -0.18 -0.17 -0.85 -0.74 0.0 -0.13 -0.49 0.11 -0.58 0.08 -0.91 -0.05 -0.08 0.38 1.02 0.95 0.95 -0.11 -0.22 -0.2 -0.23
-1.06 -2.19 0.14 -2.5 -1.62 0.52 0.93 0.89 0.38 0.75 0.74 -0.37 - -3.92 -0.96 -2.14 -0.72 - -0.51 - 1.9 -3.18 -0.96 -0.93 0.52 1.15 1.41 1.54 -0.05 -0.12 -0.73 -1.34
-0.65 -0.75 -0.42 -0.35 -0.34 -0.37 0.09 0.09 0.31 0.09 -0.17 -0.52 0.25 -0.55 0.08 0.42 -0.7 -2.06 -0.26 0.24 1.17 -0.98 -0.65 -0.23 0.43 1.16 1.29 0.96 -0.8 -0.37 -1.06 -1.11
- - - 0.36 -0.3 1.24 - -0.38 1.95 0.15 0.54 - - - - - 1.62 - -0.37 - 1.84 - - - - 0.75 1.97 - 1.97 1.06 -0.57 -0.62
-0.0 0.36 0.42 0.41 0.61 0.46 0.33 0.55 0.3 0.04 0.17 -0.11 -0.86 -0.91 0.56 -0.72 -0.65 -0.56 -0.93 -0.87 -0.4 -3.01 -0.49 -0.37 0.4 0.44 1.13 1.13 -0.86 -0.84 -1.15 -0.74
1.18 0.05 0.47 -0.42 0.82 -0.33 0.22 0.28 0.35 0.27 0.26 0.79 -3.63 -0.1 -1.51 -2.02 -1.09 -1.43 -0.27 -0.65 2.24 -3.96 -1.64 -1.13 -0.65 0.31 -0.03 0.86 -0.27 -0.61 -1.54 -2.31
-0.43 -0.7 -0.32 -0.54 -0.25 -0.51 -0.09 0.32 0.27 -0.16 0.32 -0.08 -0.21 -1.57 -1.19 0.07 -0.13 0.07 0.22 -0.63 0.61 -1.29 0.53 0.6 -1.12 1.03 0.49 0.87 0.15 0.49 -0.23 -0.58
-0.24 -0.05 0.16 0.17 0.06 0.18 0.25 0.55 0.59 0.44 0.5 0.2 -0.37 -0.59 -0.2 -0.02 -0.33 -0.89 -0.06 -1.42 0.09 -1.98 -0.1 0.12 -0.62 0.79 0.25 0.52 -0.19 -0.12 -0.4 -0.29
-2.14 -1.37 -0.34 -1.58 0.67 -1.01 -1.29 -0.99 0.84 -0.03 0.93 -2.46 0.09 -0.9 1.67 0.08 -1.91 -2.67 -0.22 - -4.56 - 0.32 0.19 -2.79 2.18 1.23 2.03 -1.28 -0.92 -0.95 -1.81
-0.23 -0.01 0.08 0.18 0.41 0.29 0.26 0.43 0.44 0.43 0.48 0.11 -0.1 -0.46 0.09 0.06 -0.63 -0.85 0.04 -0.36 0.01 -0.69 -0.48 -0.39 -0.31 0.63 0.27 0.37 -0.31 -0.21 -0.6 -0.75
0.13 0.12 0.11 0.32 0.3 0.24 0.12 0.0 0.03 0.31 0.22 0.25 -1.52 -0.12 0.07 -1.38 -1.47 -1.7 -0.61 0.08 0.93 -1.17 -1.22 -0.85 1.19 1.39 1.16 0.87 -1.87 -1.64 -2.4 -2.21
-0.02 -0.55 -0.8 -0.36 0.32 -0.06 -0.41 0.17 0.2 0.12 0.28 0.07 -1.04 -2.45 -0.42 -1.1 -0.76 -1.84 0.72 -1.13 1.12 0.12 -0.44 -0.89 -0.04 1.58 0.87 1.17 -0.02 -0.17 -0.77 -0.95
-0.83 -0.73 -1.03 -1.19 -0.34 -0.24 0.04 0.32 0.09 0.23 -0.09 -0.04 -0.68 -0.63 -0.39 -0.43 -2.06 -1.45 0.61 -1.19 2.46 -1.55 -0.4 -0.34 0.37 0.88 0.83 0.93 -1.19 -1.31 -0.61 -0.32
-0.44 0.18 0.21 0.57 0.47 0.46 0.45 0.59 0.42 0.59 0.47 0.21 -2.35 -2.63 -3.59 -2.04 -0.36 -0.47 0.03 -1.26 -0.18 - -1.76 -1.7 1.43 1.17 0.86 0.98 -0.19 -0.2 -1.1 -1.31
0.66 -1.13 -0.2 -0.84 -2.05 -0.29 -0.86 -0.34 0.76 -0.55 0.25 -0.64 -2.41 -5.27 -0.22 -2.91 -0.23 -1.61 0.86 -1.67 1.57 - -1.01 -1.78 -0.81 1.6 1.04 2.22 -0.36 -0.01 -0.48 -0.24
-0.54 -0.46 -0.7 -0.12 0.19 0.11 -0.22 -0.11 -0.05 -0.21 -0.24 -0.43 -0.49 -2.16 -1.91 0.11 -0.22 -0.3 0.14 -2.02 -0.2 -0.47 0.25 0.25 0.48 1.39 1.21 1.26 -0.22 -0.23 -0.24 0.08
-0.41 -2.34 -0.94 -0.34 -0.03 -0.76 0.04 0.19 0.95 -2.44 0.76 -0.21 -1.51 -0.68 0.79 -2.92 -3.09 -2.53 - - 1.88 -0.57 -1.56 -3.3 -0.28 1.02 2.5 2.2 -3.26 - - -2.28
-0.33 0.42 -0.79 -0.62 0.12 -0.06 0.17 0.28 -0.01 0.52 -0.17 0.19 -2.14 -1.14 -0.93 -2.37 0.1 0.73 0.36 - 1.3 - -1.56 -1.24 0.41 1.25 1.55 0.68 0.18 -0.13 -1.3 -1.15
0.54 0.39 0.08 0.14 0.37 -0.05 -0.04 0.24 -0.19 0.37 0.25 0.35 -0.4 -0.55 0.02 -0.41 -0.65 -3.94 0.17 -1.08 1.55 -3.73 -0.62 -0.56 0.38 0.42 0.62 0.45 -0.59 -0.42 -0.68 -0.69
-0.14 0.76 0.17 0.18 0.13 -0.05 0.0 -0.35 -0.53 -0.08 -0.2 0.05 -3.31 -2.77 -3.87 -0.38 0.53 0.78 -0.61 -7.27 1.34 -6.85 -0.34 -0.76 0.92 -0.12 1.1 1.38 0.51 0.23 -1.2 -1.45
0.27 0.66 0.21 0.13 0.9 0.24 0.33 0.12 0.27 0.25 0.22 -0.28 -0.94 -0.15 -0.51 -0.89 -1.03 -0.89 -0.7 -0.29 0.75 -3.8 -0.61 -0.68 0.49 1.04 0.69 1.27 -1.18 -1.05 -1.85 -1.53
0.45 1.01 0.69 0.41 0.27 0.19 -0.05 -0.17 0.31 0.07 0.22 -0.33 -1.63 -2.73 -1.8 -1.09 -1.44 -0.18 0.45 -0.94 -1.49 -1.06 -0.67 -0.77 0.24 2.11 0.81 0.87 -1.18 -1.26 -0.94 -1.47
-1.6 -0.98 -2.9 -1.1 -0.04 0.1 -0.08 0.77 0.6 -0.04 -0.5 -0.83 -1.01 - -4.61 -1.21 0.73 0.22 -0.64 -0.55 1.24 -2.13 0.1 0.02 0.73 -0.23 1.54 1.73 0.77 0.47 -1.79 -2.45
-1.43 -0.55 -1.03 -0.05 0.48 0.55 -0.83 -0.84 0.94 -0.37 -1.08 -0.82 -2.41 -0.09 1.45 -0.17 -1.32 -3.61 -1.37 - 1.93 - -1.0 -1.9 - 0.02 1.83 1.72 0.63 0.39 -0.48 -2.74
-0.01 0.23 0.42 0.32 0.68 0.03 0.29 0.14 0.21 0.11 0.2 0.04 -0.7 -0.72 -0.1 -0.06 -0.29 -1.7 0.06 - 0.71 -2.37 -0.32 -0.52 0.26 1.17 0.63 0.74 -0.41 -0.51 -0.82 -0.76
0.44 0.97 0.1 0.64 1.06 -0.16 -0.04 -0.03 1.0 0.03 0.51 0.68 0.12 0.58 0.11 -0.68 -1.94 -3.95 -0.74 -3.41 -1.11 - -1.25 -0.79 0.1 1.4 0.78 0.8 -2.03 -1.45 -2.01 -1.83
-0.44 -0.33 -0.91 -0.36 -0.07 0.14 0.69 0.84 0.57 0.04 0.45 0.13 -1.02 -0.85 0.48 -0.89 -1.13 -2.06 0.48 -4.86 -0.1 -0.33 -0.63 -0.51 -0.34 1.24 1.34 0.99 -0.64 -0.6 -0.35 -0.35
0.17 0.3 0.22 0.15 0.08 0.27 0.08 0.03 -0.02 0.16 0.16 0.01 -0.82 -0.38 -0.16 -0.78 -0.64 -0.65 -0.2 0.02 0.47 -1.52 -0.37 -0.55 0.86 1.21 0.91 0.97 -1.24 -0.89 -1.38 -1.61
0.08 0.06 -0.04 0.27 0.59 0.0 -0.14 0.58 0.71 -0.1 0.3 -0.16 0.16 -0.77 0.15 -0.06 -0.89 -1.86 0.11 -1.51 -1.45 -0.29 -0.34 -0.22 -0.32 0.95 0.51 1.17 -0.55 -0.57 -0.54 -0.3
-0.28 -1.07 -1.53 -1.18 -0.36 0.2 0.72 0.9 0.75 0.51 0.21 -0.19 -1.91 -3.54 -1.41 -1.72 -0.51 -1.01 -0.65 0.04 0.27 -0.45 -0.58 -0.83 0.67 0.47 1.11 0.95 0.12 0.19 0.59 0.54
1.43 0.47 0.37 -0.13 -0.62 -0.19 -0.41 -0.8 -0.46 0.51 0.45 0.96 -1.89 -2.15 -3.37 -1.74 -1.47 0.24 -0.37 -2.02 2.89 - -1.48 -1.25 0.81 -0.04 -0.47 -1.37 -0.69 -0.61 -1.51 -1.7
-0.08 0.3 -0.15 -0.07 -0.23 -0.39 -0.63 -0.84 -0.71 -0.63 -0.69 -0.4 -0.68 -2.23 -3.18 -0.03 0.08 -0.57 1.02 -0.52 0.78 -3.08 0.04 -0.14 1.15 0.81 1.14 1.43 -0.03 0.19 -0.46 -0.64
-0.24 -1.31 -1.62 -1.06 -0.36 0.4 0.76 1.01 0.86 0.51 0.68 0.26 -2.19 -2.33 -0.65 -1.66 -1.25 -1.99 -0.63 -1.42 0.8 0.34 -0.9 -0.87 -0.11 1.33 1.32 0.96 -0.59 -0.39 -0.21 -0.33
-0.32 -0.94 -1.4 -0.6 -0.77 0.31 0.92 0.89 0.85 0.43 -0.0 0.47 -2.86 -2.75 -1.18 -1.19 -0.13 -0.68 -0.12 - -4.17 -0.82 -0.25 -0.37 0.55 0.24 0.97 1.16 0.64 0.58 0.54 0.42
-0.45 -0.4 -0.76 -0.03 -0.3 -0.22 -0.31 0.07 -0.19 -0.65 -0.44 -0.45 -0.62 -1.14 -3.15 -0.27 -1.19 - -0.31 -1.98 0.94 -1.77 -0.52 -0.3 1.26 1.82 1.98 1.56 -0.8 -0.66 -0.77 -0.87
-0.48 -0.15 -0.09 0.42 0.39 0.22 -0.07 0.29 0.24 0.13 0.04 -0.11 0.57 -0.05 0.01 0.35 -0.86 -1.39 -0.34 -0.27 -0.94 -1.33 -0.7 -0.68 0.77 1.62 0.57 0.58 -1.08 -0.94 -0.96 -0.95
-0.5 -0.1 0.16 -0.08 -0.04 0.05 0.51 0.61 0.25 0.29 0.38 0.16 -0.41 -1.7 0.07 -0.25 -0.46 -0.91 0.12 -2.02 0.59 -2.5 -0.54 -0.99 -0.07 1.51 0.68 0.77 -0.42 -0.32 -0.6 -0.34
-0.22 -0.45 0.19 0.0 0.14 0.25 0.37 0.59 0.26 0.2 0.06 0.02 -0.53 -1.23 -0.3 -0.32 -0.55 -1.53 -0.17 -0.77 0.36 -0.28 -0.36 -0.24 -0.38 1.25 1.03 1.21 -0.37 -0.37 -1.4 -1.48
-0.27 -0.54 -0.43 -0.35 -0.27 0.12 0.08 0.39 0.25 0.11 -0.11 -0.69 -1.03 -1.55 -0.79 -0.66 -0.71 -0.82 -0.0 -2.44 1.34 -0.86 -0.95 -0.52 -0.57 1.06 1.68 1.57 -0.17 -0.21 -0.65 -0.23
-0.09 -0.29 -0.01 -0.23 0.08 -0.09 0.13 0.07 0.21 0.23 0.26 0.07 -0.34 -0.23 0.47 -0.3 -0.53 -0.82 -0.42 -0.12 1.44 -3.88 -0.98 -0.75 0.71 0.62 0.39 0.27 -0.61 -0.59 -0.11 0.12
-0.08 0.01 -0.15 -0.03 -0.0 -0.19 -0.14 -0.16 -0.03 0.09 -0.12 -0.02 -0.11 0.26 0.15 0.04 -0.23 -0.21 -0.17 -1.3 -0.19 -0.29 -0.23 -0.33 0.66 0.47 0.62 0.76 -0.1 -0.12 -0.09 -0.1
-0.11 -0.03 0.49 0.44 0.34 -0.18 -0.21 -0.31 0.11 -0.01 -0.05 -0.25 -0.53 -1.09 -1.11 -0.17 -1.27 -1.63 0.81 -0.19 0.14 -0.24 -0.78 -0.15 0.83 1.79 0.16 0.47 -0.62 -0.71 -0.75 -0.46
-0.04 -0.02 -0.36 -0.23 0.36 0.03 0.14 0.52 0.61 0.66 0.35 0.08 -0.26 -4.23 -4.66 -1.49 -0.84 -0.97 0.68 -0.21 -1.41 -3.74 -0.29 -0.0 0.58 1.3 1.11 1.2 -0.24 -0.3 -1.07 -0.99
-0.68 -0.84 -0.52 -0.33 -0.21 -0.25 -0.05 -0.05 -0.07 0.02 -0.22 -0.67 0.07 0.62 0.58 -0.04 -0.57 -1.0 0.23 -0.31 1.57 -1.57 -0.34 -0.37 0.46 0.79 0.72 0.59 -0.44 -0.41 -0.57 -0.43
-0.4 -0.72 -0.47 -0.17 -1.27 0.11 -0.04 0.24 0.13 -0.27 0.04 -0.52 -0.76 -1.03 -0.2 -0.55 -0.67 0.14 0.02 -0.15 1.04 0.27 -0.16 -0.05 0.06 0.93 1.24 0.95 -0.09 0.16 -0.84 -1.12
0.95 0.15 0.01 -0.04 -0.03 -0.29 0.01 0.02 -0.03 0.37 0.53 0.56 -2.02 -2.19 -2.39 -1.41 -0.69 0.81 -0.7 -1.38 1.82 -0.83 -0.92 -1.1 0.95 0.23 0.26 0.26 -0.23 -0.36 -0.41 -0.76
0.11 0.04 0.03 -0.05 0.17 0.12 -0.02 0.07 0.02 -0.0 0.14 -0.08 -0.34 -0.52 -1.81 -0.32 -0.09 -0.15 0.2 -1.63 0.7 -1.32 0.02 0.3 0.23 1.03 0.75 0.59 -0.11 -0.14 -0.6 -0.83
0.13 0.03 -0.09 -0.04 0.3 0.44 0.06 0.25 0.04 0.03 0.11 -0.11 -0.73 -0.27 0.35 -0.36 0.01 -0.49 0.58 -3.41 0.05 -2.04 0.0 0.16 0.12 0.46 0.39 0.44 -0.11 -0.19 -0.03 0.02
-0.18 -1.39 -1.22 -0.25 0.35 1.07 1.11 1.01 0.68 0.56 0.6 0.11 -2.24 -2.45 0.27 -1.37 0.08 0.28 -0.34 -4.33 -0.88 -3.73 -0.42 -1.05 -1.07 -0.49 1.23 1.19 -0.07 0.37 -0.37 -1.1
-0.03 -0.2 0.04 0.21 0.35 0.27 0.34 0.44 -0.01 0.02 -0.15 -0.12 -1.27 -0.9 -0.13 -0.25 -0.28 -0.28 0.68 -5.62 0.2 -3.22 -0.14 -0.25 -0.5 0.84 0.96 0.7 -0.12 -0.07 -0.24 0.34

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.