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Heatmap: Cluster_76 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
16.54 27.43 27.29 27.48 22.95 25.63 16.62 14.2 23.85 21.31 18.49 14.82 22.21 41.63 93.55 25.57 27.11 21.13 5.77 0.55 3.75 7.34 14.6 10.67 9.87 6.77 9.12 11.66 13.8 19.57 11.64 7.63
13.38 12.44 14.27 14.52 17.66 15.75 16.07 9.71 15.67 14.46 13.08 12.45 5.0 1.56 39.17 6.04 14.08 10.46 7.31 1.46 1.05 6.27 6.79 4.03 0.11 2.9 2.6 4.0 7.71 8.29 5.97 5.14
4.89 4.53 6.12 5.91 10.81 10.03 9.29 8.49 8.9 8.2 7.62 5.64 2.92 2.18 20.97 4.92 8.45 9.36 3.43 1.06 0.13 6.91 3.66 1.55 0.0 1.69 4.76 2.62 6.92 6.18 4.06 2.91
98.65 108.75 107.98 103.27 102.71 104.21 117.07 113.91 125.05 141.47 127.77 126.88 118.77 226.66 249.4 124.37 80.42 76.43 84.87 94.13 81.47 40.49 93.26 95.08 36.41 57.35 40.12 38.54 83.01 85.32 87.29 100.51
3.19 4.09 4.57 4.34 3.93 4.9 4.76 3.31 5.01 4.45 4.16 3.13 4.7 6.24 14.92 2.82 4.92 3.44 2.08 5.88 1.93 5.38 0.44 0.5 0.12 1.15 1.08 1.91 3.02 4.74 1.74 1.87
9.37 8.48 8.84 7.89 9.93 8.74 7.08 6.82 9.4 9.85 9.94 7.88 9.02 3.74 34.35 12.59 4.19 4.48 3.49 5.54 2.15 1.22 2.44 3.79 0.23 3.94 2.62 3.45 2.34 3.41 1.99 1.68
16.39 17.25 20.15 19.0 19.92 19.63 18.64 12.94 17.9 16.16 16.72 13.88 4.07 5.6 39.96 7.76 22.1 13.53 5.49 5.53 3.79 13.19 4.53 3.57 0.98 5.18 4.64 6.83 13.38 16.08 11.79 11.19
47.4 50.04 47.52 49.77 48.15 53.21 51.09 37.9 42.7 43.04 47.18 40.79 21.74 36.01 99.24 28.34 60.7 38.3 24.87 48.74 39.24 25.21 26.99 27.62 34.63 17.74 22.2 26.22 37.72 46.16 27.17 18.35
70.37 68.24 68.78 72.56 68.51 70.17 61.5 63.63 68.59 69.06 58.46 63.07 98.71 92.14 116.03 85.88 54.87 45.37 87.82 48.84 33.42 64.36 71.54 81.61 29.88 67.15 54.26 47.01 55.97 52.54 67.94 79.73
90.04 105.33 115.45 113.96 107.38 105.22 111.06 89.33 98.36 95.59 90.72 82.79 102.5 171.26 238.58 114.06 100.62 71.6 88.89 92.08 23.84 23.2 89.79 91.45 27.36 69.79 70.74 90.27 76.66 88.08 66.55 64.92
49.0 51.25 54.68 52.93 49.41 45.94 54.69 44.41 66.05 68.15 64.81 59.67 26.35 53.81 144.87 28.51 52.56 53.51 13.64 18.69 11.36 38.17 16.49 21.81 3.78 19.85 9.89 13.23 33.97 40.78 42.45 34.73
4.51 4.27 4.42 4.54 5.87 4.76 4.48 4.82 6.03 6.64 5.51 4.61 2.36 3.41 10.96 2.86 3.79 3.34 2.67 0.2 0.21 0.71 3.73 2.63 0.05 2.14 1.67 1.25 3.31 3.68 2.22 3.52
11.7 14.0 16.12 13.07 15.38 12.39 13.87 10.91 11.57 11.66 11.39 10.9 5.47 14.18 42.58 11.12 15.53 1.49 4.79 11.42 0.54 0.52 5.96 5.43 1.02 8.38 5.15 6.85 9.22 10.48 3.66 3.29
41.34 41.49 46.57 42.98 45.48 44.96 47.08 39.14 49.55 44.8 46.24 40.19 25.85 60.54 101.84 36.73 39.36 31.26 32.63 28.25 19.36 24.54 33.79 28.17 7.05 20.94 31.77 29.77 26.61 28.4 44.57 47.88
76.94 76.88 72.89 86.84 95.64 108.66 73.76 72.8 98.39 98.82 103.84 85.74 52.4 84.84 356.68 72.96 31.35 19.06 13.63 96.34 55.74 208.68 8.26 19.89 50.05 40.13 21.83 24.28 20.29 32.29 18.0 15.01
15.97 19.66 21.32 19.92 19.64 21.2 20.74 12.6 18.09 15.64 18.26 16.25 9.79 23.69 36.54 13.51 14.89 15.51 6.01 13.5 3.0 0.32 12.25 12.49 7.2 5.39 5.34 4.69 9.51 10.09 8.87 7.19
29.35 38.46 39.77 35.63 35.35 30.36 38.48 37.79 40.76 46.79 41.25 33.41 41.44 84.87 99.68 46.49 29.1 26.4 41.08 37.28 2.34 15.97 21.47 31.89 6.41 23.19 13.65 13.28 20.96 23.8 14.79 19.7
613.85 478.49 471.09 510.67 451.68 517.1 437.81 600.18 536.69 592.53 611.91 563.04 711.15 961.48 1093.54 704.68 409.67 500.5 634.51 485.96 212.49 493.43 549.55 601.0 101.17 552.41 415.28 353.85 422.47 407.98 535.22 706.42
108.48 147.18 162.19 186.59 176.79 191.91 206.48 173.23 195.37 172.68 172.2 141.27 88.31 237.1 301.65 139.19 183.62 127.83 121.2 133.12 74.06 155.54 176.9 200.74 75.73 58.18 97.68 123.66 149.69 173.29 124.35 104.64
47.06 60.24 51.46 71.93 66.99 66.01 65.25 55.42 55.36 63.42 74.81 52.94 71.9 43.49 200.31 70.93 71.67 126.31 28.83 31.11 9.36 98.0 61.16 60.84 2.82 3.24 3.7 7.21 47.3 51.37 42.92 29.51
4.2 4.38 5.38 5.14 5.13 6.57 5.89 6.33 6.31 6.44 7.68 6.31 1.57 0.86 17.09 3.6 5.75 3.0 5.08 0.12 1.77 0.08 1.69 0.92 1.13 2.39 1.92 2.79 4.85 5.81 3.3 3.31
26.52 31.73 32.23 39.56 32.47 26.84 49.22 35.27 61.29 47.49 45.1 38.45 4.79 87.08 211.61 8.9 25.28 21.16 5.05 1.75 6.28 2.5 11.22 13.34 21.36 10.2 9.14 14.05 18.84 23.75 12.66 4.7
15.06 14.86 17.02 16.63 17.03 16.8 20.94 19.07 21.96 21.74 22.32 17.35 5.07 4.11 55.57 10.83 18.13 10.74 10.72 3.32 1.27 12.53 8.69 8.2 3.16 22.26 14.08 19.57 15.14 16.14 13.19 15.44
31.91 30.24 29.47 33.38 37.35 43.24 45.59 54.42 53.2 44.23 46.31 35.44 7.9 21.48 90.29 14.02 35.93 33.13 33.41 11.02 33.93 12.58 18.22 12.35 17.13 36.21 42.44 42.76 38.31 36.1 21.56 22.56
7.14 7.21 8.08 6.88 9.33 7.22 6.84 5.74 7.67 7.94 8.03 6.36 1.53 0.45 15.76 2.83 4.75 4.08 1.05 2.07 0.59 3.8 0.39 0.52 0.12 3.5 2.72 3.44 2.53 3.19 3.64 3.96
1.64 3.45 3.69 2.21 1.53 1.45 2.96 2.16 2.19 2.6 2.16 2.42 0.24 8.12 13.45 0.68 0.76 0.55 0.8 0.09 0.07 0.32 0.6 0.31 0.11 0.71 1.05 1.59 0.72 1.29 0.11 0.3
4.17 4.48 4.46 4.09 4.91 5.25 6.19 3.01 5.05 3.43 3.9 3.92 5.31 7.29 14.5 3.2 4.34 1.33 2.04 0.0 5.11 3.72 0.32 0.47 0.08 1.12 1.44 1.14 3.0 4.21 1.59 1.6
8.97 11.8 12.09 14.28 16.5 16.87 18.23 14.58 14.96 14.02 12.57 10.32 6.97 5.88 42.9 5.84 16.31 11.58 5.09 8.93 5.38 15.93 7.81 6.28 3.32 5.07 7.76 9.82 10.43 13.09 6.28 5.46
27.92 30.15 35.52 33.61 37.37 39.08 40.59 33.92 46.37 42.46 44.72 33.74 8.95 4.27 92.25 28.08 33.74 27.01 11.35 16.4 9.26 23.97 13.44 12.61 3.11 32.81 14.44 14.57 23.29 29.04 39.49 32.71
15.24 15.4 16.34 18.89 17.19 20.15 18.67 17.05 23.93 25.32 23.71 18.51 12.93 8.85 63.16 16.87 20.88 17.68 15.23 6.08 1.45 7.16 9.46 14.59 0.23 8.89 6.08 8.6 14.95 17.89 22.49 22.65
0.87 0.79 1.03 1.33 1.12 1.16 1.23 0.81 0.84 1.06 0.95 1.02 0.24 0.25 3.82 0.38 1.59 0.6 1.02 0.32 0.02 0.41 0.52 0.32 0.4 0.7 1.0 1.27 0.89 1.08 0.52 0.39
7.1 7.47 8.89 7.83 6.78 7.32 7.57 7.02 8.53 8.14 9.2 7.06 1.84 3.28 18.29 2.91 5.22 2.24 5.46 5.75 2.75 8.08 2.76 2.55 1.76 3.81 3.78 4.53 5.75 5.59 2.99 3.04
150.53 155.19 171.89 159.19 160.88 157.67 184.55 148.36 164.11 159.23 156.47 142.05 118.41 214.1 558.83 119.37 128.6 75.61 45.21 18.09 8.17 25.66 62.94 81.08 19.26 58.01 59.42 78.4 86.15 99.26 141.14 100.45
5.39 5.36 4.25 6.11 6.32 4.6 4.8 3.91 5.29 3.93 3.99 3.24 1.75 7.54 15.25 3.43 4.98 4.51 6.14 10.82 0.27 2.19 1.57 2.68 2.02 6.86 3.62 5.95 3.11 4.93 5.21 4.01
5.73 6.58 3.87 5.52 4.03 5.41 5.17 4.08 3.93 3.92 2.86 4.72 2.0 9.5 22.07 3.59 6.89 11.62 10.83 12.56 1.72 0.63 3.83 3.18 3.18 12.4 8.84 10.53 5.53 5.55 1.64 2.71
1.82 2.01 2.06 2.2 2.2 2.3 1.68 1.75 2.06 2.35 1.91 2.04 0.99 3.58 8.29 1.78 1.14 1.01 0.43 1.85 0.05 0.85 0.51 0.62 0.44 0.5 1.03 0.72 0.89 1.08 0.86 0.64
9.86 10.49 10.69 9.43 10.2 10.5 13.58 6.63 10.58 7.33 9.77 10.78 3.96 5.43 25.31 5.88 8.39 6.54 4.97 13.37 1.26 5.85 4.7 3.66 2.24 7.07 4.97 6.71 6.03 7.85 4.74 4.9
15.61 18.9 22.0 19.55 20.36 20.85 26.08 21.35 23.18 22.62 23.25 17.24 9.59 21.03 62.3 14.5 19.17 8.24 6.69 20.72 8.36 14.54 7.01 6.84 2.15 15.16 8.65 9.85 13.7 13.66 8.99 9.93
6.64 8.33 9.87 9.53 11.1 11.74 12.15 9.87 10.67 11.0 11.5 9.6 3.4 4.72 27.56 5.54 7.88 5.19 10.5 10.39 4.44 10.39 2.12 1.7 2.65 9.93 11.3 11.13 5.38 6.0 5.46 7.57
15.62 20.46 21.4 20.03 20.92 20.44 28.31 17.75 21.04 19.35 19.07 16.69 7.13 20.79 55.19 12.81 23.05 15.87 8.64 25.27 8.02 18.93 7.22 9.26 2.95 12.28 11.7 16.44 13.55 17.76 12.21 9.23
11.94 11.18 11.16 10.53 10.15 11.7 13.48 7.66 9.99 10.08 11.28 10.05 5.45 3.81 18.83 6.66 9.89 8.25 4.38 11.73 3.51 11.2 4.58 4.31 3.15 2.88 5.05 5.59 6.57 8.12 3.74 3.51
29.46 39.96 33.05 37.01 29.05 34.48 29.17 18.15 23.72 19.99 22.04 21.0 22.71 38.61 86.91 32.05 30.11 23.96 19.05 13.38 16.9 44.37 22.99 23.51 17.76 10.3 12.91 13.53 19.8 25.86 12.64 13.35
30.83 28.86 30.58 22.88 28.34 24.56 27.37 17.96 30.11 25.67 31.28 24.48 4.5 1.16 61.36 5.54 40.72 21.01 6.36 42.72 10.98 43.56 0.94 0.34 4.81 5.06 7.89 11.44 23.68 27.89 11.91 5.86
7.82 10.39 10.59 10.19 9.19 10.09 8.16 6.37 7.71 5.77 7.15 6.44 6.41 16.53 34.68 7.75 8.54 4.77 2.81 0.03 0.0 1.33 6.62 3.72 1.88 0.66 2.45 3.75 5.09 5.85 1.62 1.19
15.89 14.4 17.62 16.49 20.9 16.29 18.5 12.18 15.96 16.86 18.9 12.72 5.2 11.4 45.24 8.36 17.22 18.94 9.33 0.35 0.59 7.08 7.39 5.19 0.37 12.03 9.87 10.32 10.76 12.01 10.42 9.75
7.67 6.51 6.93 7.27 7.2 7.07 7.9 5.25 5.6 6.82 5.94 5.34 6.29 19.29 16.39 10.28 9.89 9.48 4.84 7.69 1.13 0.07 6.3 8.66 0.37 0.77 1.41 1.73 4.06 4.58 4.73 2.69
50.78 53.93 62.02 56.66 70.7 60.4 60.32 51.25 69.95 61.41 73.14 49.4 22.95 30.46 173.72 35.63 63.95 69.04 19.92 0.42 0.41 0.0 16.44 12.1 0.0 24.63 25.3 30.31 43.07 54.29 34.17 34.56
3.95 3.83 4.18 4.51 4.6 5.19 3.52 4.43 4.04 4.03 3.96 3.35 4.04 6.71 10.88 3.91 4.03 4.68 3.59 3.06 0.55 1.06 3.82 3.39 1.71 1.96 3.87 4.12 2.32 3.01 2.44 2.13
5.13 6.86 6.73 7.4 6.65 6.53 8.06 10.7 11.38 12.68 11.8 8.26 4.14 3.8 31.6 9.06 6.49 4.9 5.3 1.32 0.31 5.25 5.67 2.18 1.48 6.22 3.67 4.71 5.7 6.35 5.46 3.71
7.19 7.43 7.95 10.09 9.87 9.92 9.64 9.32 11.73 9.32 11.63 8.07 4.14 10.04 27.13 5.25 5.77 1.96 1.07 15.35 2.18 13.87 1.16 0.98 0.09 6.55 4.27 4.49 3.26 3.15 3.37 3.59
37.09 30.25 22.37 24.88 22.9 22.31 23.05 22.65 33.89 29.9 33.01 31.42 5.79 9.81 60.72 10.26 24.97 16.83 15.69 28.57 6.62 5.75 12.73 9.85 17.46 11.13 11.78 16.89 19.83 21.12 9.43 7.93
38.92 30.76 30.7 29.32 30.77 28.77 33.52 35.16 43.74 48.05 48.46 45.6 18.93 24.25 78.24 22.1 31.8 19.77 19.77 30.98 9.94 21.12 6.61 7.5 16.67 23.22 24.89 28.72 24.42 27.86 17.31 14.54
11.89 10.96 12.7 12.75 12.7 16.11 15.26 13.48 16.49 17.61 12.45 11.64 10.0 10.52 22.75 10.88 10.07 8.7 9.88 7.57 8.63 10.42 11.73 11.89 8.96 12.06 15.1 14.88 9.57 10.1 8.61 8.66
18.7 19.7 20.8 21.66 23.47 21.19 31.23 32.19 36.21 36.29 35.6 32.76 16.11 17.92 94.96 21.98 20.19 19.86 24.89 9.29 1.5 0.59 12.63 12.39 3.65 37.96 30.7 32.2 25.53 23.77 20.77 23.43
39.89 54.71 66.83 60.3 59.55 73.64 83.04 50.29 65.1 59.61 52.72 49.33 17.52 69.6 139.8 39.52 48.73 46.09 18.34 64.62 13.41 32.08 51.26 67.86 3.83 16.04 11.84 16.95 44.37 58.96 36.75 31.01
21.4 27.55 40.0 48.69 51.0 52.78 74.69 32.06 37.07 31.02 29.34 24.97 12.51 38.91 165.84 26.34 43.14 21.61 21.31 37.23 11.71 46.29 37.15 44.04 11.28 10.16 17.04 15.84 32.93 30.31 13.46 12.25
10.64 14.45 12.63 12.32 11.86 13.04 9.27 5.88 8.7 7.36 7.77 7.79 10.75 5.13 27.84 7.17 15.06 10.1 3.71 11.99 8.12 1.64 6.81 4.26 6.32 0.77 3.29 5.17 7.08 9.62 3.86 3.37
40.07 30.74 25.96 31.35 35.82 33.08 35.99 36.92 49.53 43.55 48.88 44.68 9.67 15.52 94.08 12.87 32.22 22.93 10.82 16.24 9.71 28.95 14.49 12.33 12.22 33.23 39.27 33.85 24.54 26.43 32.1 43.55
26.3 25.96 30.92 29.42 30.43 32.76 32.8 27.67 37.73 35.88 33.56 28.14 8.33 23.61 80.26 12.16 23.23 13.31 10.91 4.96 0.58 5.92 5.71 5.36 0.82 7.25 11.88 14.05 17.58 21.71 25.45 23.73
45.84 47.03 50.29 51.72 52.06 48.02 59.59 36.25 54.24 50.24 49.13 47.87 21.86 12.67 87.03 23.67 73.12 57.9 19.18 67.7 41.97 30.82 17.2 12.18 42.04 24.63 20.72 26.12 53.89 49.44 27.93 22.1

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)