Heatmap: Cluster_343 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.29 -0.14 0.12 0.18 0.18 1.24 0.99 1.46 0.62 0.07 0.01 -0.02 -4.54 -2.69 -1.31 -2.14 -0.56 -0.44 0.81 - -3.43 - -0.62 -0.19 -1.24 0.05 0.75 1.09 0.49 0.52 0.22 -1.46
-0.16 -0.35 -0.59 0.1 0.37 0.68 0.83 1.1 0.0 0.15 -0.3 0.06 -0.27 -1.41 -0.13 0.28 -0.25 -0.18 0.48 -5.48 -21.84 -2.17 0.01 -0.15 -2.39 0.41 0.09 1.03 0.35 0.42 -0.11 0.03

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.