Heatmap: Cluster_234 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-1.1 -1.17 -2.92 -0.61 - 0.6 -0.7 0.81 1.54 -0.07 -0.23 0.1 - - - -2.49 0.53 1.22 -0.07 - -1.21 - 0.7 1.15 - 1.48 - - 1.28 1.47 0.95 0.62
-0.86 -0.83 -0.24 -0.86 -3.59 -0.63 -0.34 0.46 1.18 0.65 0.73 -1.16 -1.75 -2.8 -1.95 -1.71 -0.66 1.12 1.33 - 0.01 -2.09 -0.44 0.49 0.64 0.54 -0.33 1.17 0.57 0.5 -0.37 0.28

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.