Heatmap: Cluster_99 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00271600 (evm_27.TU.AmTr_v1.0_scaffold00001.493)
- 0.37 0.09 - -4.01 -1.05 -2.4 -1.84 -2.7 -2.54 0.9 0.4 0.0 -1.12 -2.22 1.28 -0.49 0.05 0.53 -0.07 -0.58 2.63
AMTR_s00008p00249890 (evm_27.TU.AmTr_v1.0_scaffold00008.184)
- - - -3.02 -1.98 - -8.4 - -5.76 -7.04 1.55 2.11 -2.16 -2.29 -3.25 -2.71 -3.82 0.78 -2.68 -1.28 -1.49 3.45
AMTR_s00009p00268110 (evm_27.TU.AmTr_v1.0_scaffold00009.415)
0.69 -6.3 - -8.93 -1.2 - -7.54 -3.2 -6.43 -6.66 1.0 1.68 -0.24 -1.85 -2.11 -0.76 0.91 -0.2 -0.87 -0.7 -0.27 2.98
AMTR_s00010p00251660 (evm_27.TU.AmTr_v1.0_scaffold00010.361)
- - - - -3.99 - - - - - 1.66 0.77 -2.22 -4.92 -7.34 - 0.11 1.5 -1.98 -3.62 -2.16 3.63
AMTR_s00010p00266400 (evm_27.TU.AmTr_v1.0_scaffold00010.524)
1.17 -0.11 -0.73 -2.08 -0.14 -1.36 -4.43 - -4.61 -3.23 1.04 2.18 -1.58 -3.01 -2.54 -1.9 -1.22 -3.2 -3.33 -3.45 -5.81 3.05
AMTR_s00011p00186530 (evm_27.TU.AmTr_v1.0_scaffold00011.55)
-7.78 -3.39 -0.24 -6.3 -4.29 - -9.46 - -6.94 -7.93 0.81 1.14 1.07 -2.37 -3.39 0.31 -0.04 0.64 0.28 -1.15 -2.53 3.17
AMTR_s00011p00202020 (evm_27.TU.AmTr_v1.0_scaffold00011.70)
-0.86 - -1.43 -10.2 -4.94 -6.75 -9.03 - -8.19 -8.53 1.2 0.52 0.51 -2.7 -1.9 -4.3 0.33 1.17 -0.28 -2.0 -3.42 3.42
AMTR_s00012p00251700 (evm_27.TU.AmTr_v1.0_scaffold00012.255)
- - - - 0.66 - - - -3.24 -4.45 0.52 1.06 -1.71 -4.01 -1.8 -0.09 -1.51 1.28 1.7 - 1.13 2.79
AMTR_s00013p00130980 (evm_27.TU.AmTr_v1.0_scaffold00013.63)
-0.46 -0.29 -1.18 0.17 -1.52 - -7.76 -9.22 -9.29 -7.52 0.66 0.08 1.11 -0.13 0.35 -1.23 0.98 0.16 -0.28 0.23 -1.75 2.52
AMTR_s00013p00167480 (evm_27.TU.AmTr_v1.0_scaffold00013.92)
- - - - -0.95 - - - -7.51 - 1.41 2.05 -1.26 -5.67 -3.13 - 0.56 -0.02 -1.58 - - 3.5
AMTR_s00013p00238100 (evm_27.TU.AmTr_v1.0_scaffold00013.195)
- - - - -2.89 - -6.76 - -3.21 -4.39 0.88 1.16 -0.12 -6.65 -3.32 - 1.1 1.21 -0.78 -2.58 -2.89 3.49
AMTR_s00021p00114200 (evm_27.TU.AmTr_v1.0_scaffold00021.62)
- - - - -4.06 - - - - - 1.28 0.86 0.74 -2.24 -0.66 - 1.38 1.56 0.47 -4.88 - 3.04
AMTR_s00022p00201400 (evm_27.TU.AmTr_v1.0_scaffold00022.234)
- - - - -3.66 - -7.84 - -4.07 -4.51 1.6 0.27 -1.33 -2.12 -1.79 -4.58 2.01 - -2.73 -6.85 - 3.63
AMTR_s00023p00040670 (evm_27.TU.AmTr_v1.0_scaffold00023.13)
0.23 - 0.06 -1.04 -1.62 -4.8 -6.28 -9.17 -5.64 -5.07 0.85 0.97 0.16 -1.27 -1.78 -0.39 -0.33 0.25 0.03 -0.68 -1.42 3.09
AMTR_s00024p00140200 (evm_27.TU.AmTr_v1.0_scaffold00024.88)
-0.58 -1.54 -1.69 - -3.48 -5.34 - - - - -0.05 1.6 0.19 -3.51 -4.61 -4.78 -1.26 0.09 -2.38 -4.17 - 3.76
AMTR_s00025p00126710 (evm_27.TU.AmTr_v1.0_scaffold00025.117)
- - 1.26 -6.8 0.02 - -6.0 0.18 -7.43 -6.13 0.49 1.91 -0.04 -4.1 -2.05 -1.99 0.84 0.79 -0.52 -1.34 -0.67 2.45
AMTR_s00028p00153320 (evm_27.TU.AmTr_v1.0_scaffold00028.61)
-5.12 -2.78 - - -5.94 - -10.23 - - - 1.53 1.1 -0.93 -9.69 -7.86 -0.26 1.59 0.58 -0.51 -1.43 -0.4 3.18
AMTR_s00030p00032810 (evm_27.TU.AmTr_v1.0_scaffold00030.10)
- - - - -0.97 - - - -3.71 -5.66 1.38 1.04 -0.02 -5.0 -3.02 - - 0.52 -0.54 0.52 -0.63 3.51
AMTR_s00036p00231220 (evm_27.TU.AmTr_v1.0_scaffold00036.171)
-4.17 - - -5.05 -3.87 - -9.85 -8.86 - - 0.99 1.23 1.09 -2.14 -0.67 1.52 -0.79 1.19 0.21 -1.76 -0.46 2.73
AMTR_s00037p00031210 (evm_27.TU.AmTr_v1.0_scaffold00037.8)
- - - - -1.41 - - - - - 1.42 - 0.2 -1.04 - - 1.86 - - - - 3.77
AMTR_s00039p00172790 (evm_27.TU.AmTr_v1.0_scaffold00039.133)
- - - - -0.53 - - - - -5.44 1.31 1.74 -0.13 -1.97 -5.52 - - - - - - 3.84
AMTR_s00040p00135930 (evm_27.TU.AmTr_v1.0_scaffold00040.104)
-1.04 - - 0.31 -3.53 - - - - - 1.04 1.07 -1.62 - -4.89 -5.22 -1.05 -3.85 -3.5 -7.61 - 3.91
AMTR_s00044p00214770 (evm_27.TU.AmTr_v1.0_scaffold00044.229)
- -0.23 -2.04 - -1.48 - -9.74 - - - 1.48 1.26 -1.38 - -10.15 -1.45 -0.84 0.21 -0.27 -2.67 -2.41 3.55
AMTR_s00045p00055640 (evm_27.TU.AmTr_v1.0_scaffold00045.36)
- - - - -4.88 - - - - - -0.42 0.24 -2.22 -8.05 - 1.26 2.38 -2.45 -3.02 -5.84 - 3.57
AMTR_s00045p00172820 (evm_27.TU.AmTr_v1.0_scaffold00045.206)
0.12 -0.89 0.05 -0.52 -1.06 - -7.27 - -4.23 -4.58 0.87 0.77 0.61 -2.35 -0.34 0.92 -0.07 0.49 -0.65 -0.46 -0.92 2.56
AMTR_s00046p00030250 (evm_27.TU.AmTr_v1.0_scaffold00046.8)
-6.6 -4.63 0.12 -2.47 -1.53 - -1.34 -7.36 -0.3 -0.7 0.47 0.65 -0.02 0.2 -1.8 -0.39 1.02 0.86 0.37 -1.8 -0.09 2.59
AMTR_s00049p00058940 (evm_27.TU.AmTr_v1.0_scaffold00049.33)
-0.85 - - - 0.02 - -1.71 - -1.05 -0.76 1.45 0.65 -0.63 -2.7 -0.93 -0.02 0.43 0.88 -0.15 -3.38 -1.39 2.98
AMTR_s00051p00020930 (evm_27.TU.AmTr_v1.0_scaffold00051.5)
- 1.65 -0.47 - -3.46 - - - - - 1.68 1.56 0.22 -6.24 -5.73 - 0.12 -2.09 -1.34 -3.12 - 3.15
AMTR_s00052p00146290 (evm_27.TU.AmTr_v1.0_scaffold00052.51)
-3.79 2.65 - -5.23 -0.34 - -7.13 - - -6.42 -0.98 -0.22 0.5 -0.36 -2.94 -2.78 -1.97 - -0.81 -0.55 -0.98 3.16
AMTR_s00055p00147440 (evm_27.TU.AmTr_v1.0_scaffold00055.64)
- - - - -1.98 - -3.08 - -4.01 -3.78 1.35 1.5 0.25 -6.31 -2.87 -1.27 1.01 1.71 0.57 -1.3 -1.25 2.76
AMTR_s00055p00190270 (evm_27.TU.AmTr_v1.0_scaffold00055.123)
- - - -3.69 -4.71 - -3.66 - -4.38 -5.24 0.67 1.75 -0.43 -6.07 -5.33 - 0.96 0.41 -0.96 -0.83 - 3.54
AMTR_s00056p00113680 (evm_27.TU.AmTr_v1.0_scaffold00056.83)
- 2.57 - - -6.73 - -3.57 - -4.23 -3.36 0.94 0.43 -1.77 -5.17 -7.38 - -0.84 -0.98 -1.55 -6.3 - 3.43
AMTR_s00057p00211420 (evm_27.TU.AmTr_v1.0_scaffold00057.261)
-5.31 -5.46 -5.51 -5.24 -4.21 - -10.28 - -11.91 - 0.44 0.42 -6.2 -7.16 -3.98 1.5 0.98 0.66 0.24 -5.82 -1.52 3.48
AMTR_s00058p00144150 (evm_27.TU.AmTr_v1.0_scaffold00058.110)
-1.08 -1.25 -3.05 -0.04 -2.09 - -9.99 - -11.77 - 0.93 0.96 0.85 -1.32 -2.96 -3.05 0.21 -0.85 -1.29 -0.58 -1.33 3.36
AMTR_s00061p00045500 (evm_27.TU.AmTr_v1.0_scaffold00061.21)
- - - 0.45 -1.36 - - - - - 1.95 1.36 -0.1 -5.4 -1.05 - -0.72 -1.83 -1.28 - - 3.47
AMTR_s00063p00186540 (evm_27.TU.AmTr_v1.0_scaffold00063.68)
-3.37 0.41 -0.66 - -6.46 -4.35 -9.01 - - -9.48 0.39 1.07 -0.47 -4.44 -9.54 -3.27 -1.19 0.56 0.51 -2.65 -4.64 3.59
AMTR_s00066p00205980 (evm_27.TU.AmTr_v1.0_scaffold00066.281)
1.65 2.12 - - -0.71 -1.04 -4.36 - 0.0 -1.14 -0.28 0.5 -0.62 -5.24 -3.21 -4.46 -0.69 -1.76 -1.93 -2.63 -2.65 2.87
AMTR_s00067p00097170 (evm_27.TU.AmTr_v1.0_scaffold00067.76)
- - - - -1.41 - -8.61 - - - 0.41 2.21 -2.76 -1.63 -3.52 - -0.61 -1.59 -0.76 -1.85 -1.07 3.68
AMTR_s00068p00198250 (evm_27.TU.AmTr_v1.0_scaffold00068.165)
-2.98 - - -5.5 -5.85 - - - - - 1.65 1.13 -0.16 -5.67 -6.28 -2.59 1.44 0.96 -0.04 -0.92 0.69 2.93
AMTR_s00077p00136900 (evm_27.TU.AmTr_v1.0_scaffold00077.133)
- - 0.13 - -2.15 - -4.33 -1.44 -4.48 -4.06 0.85 1.89 0.32 -4.14 -0.86 -1.95 -0.57 1.77 0.79 -4.13 -1.32 2.65
AMTR_s00077p00137380 (evm_27.TU.AmTr_v1.0_scaffold00077.134)
- - - - -3.81 - -2.99 - -3.27 -3.91 0.77 2.41 0.53 -3.46 -0.47 - -0.14 -1.24 1.24 -3.47 - 3.1
AMTR_s00078p00159290 (evm_27.TU.AmTr_v1.0_scaffold00078.143)
- - - -3.61 -2.42 - -7.75 - -5.89 -7.48 2.0 1.64 -0.38 -3.44 -1.8 -2.1 0.64 -3.31 -1.14 -3.57 -0.15 3.34
AMTR_s00090p00075720 (evm_27.TU.AmTr_v1.0_scaffold00090.26)
- - - -0.18 -2.26 - - - - - 2.11 0.37 0.61 - -6.59 -3.2 - - -3.99 -6.61 - 3.76
AMTR_s00098p00114560 (evm_27.TU.AmTr_v1.0_scaffold00098.29)
0.85 - 0.31 -1.95 -4.17 - - -2.8 - - 1.2 0.55 0.57 -5.08 -4.77 -2.38 1.5 0.55 -0.9 -3.48 -2.58 2.99
AMTR_s00113p00026730 (evm_27.TU.AmTr_v1.0_scaffold00113.6)
1.04 - - - -6.06 - - - - - 0.74 1.06 -1.2 -5.83 -4.74 -1.19 -3.11 -0.2 -0.51 -0.79 -2.09 3.67
AMTR_s00114p00046060 (evm_27.TU.AmTr_v1.0_scaffold00114.15)
- 0.44 - -8.69 -0.77 -6.15 -8.55 -8.09 - -10.61 1.81 1.6 -1.28 -5.98 -5.35 -6.88 1.26 -0.98 -1.99 -2.99 -3.49 3.28
AMTR_s00119p00023540 (evm_27.TU.AmTr_v1.0_scaffold00119.7)
- - - - -1.64 - - - -4.39 - 0.95 0.34 0.52 - -2.85 - 1.57 - -1.01 -1.82 - 3.71
AMTR_s00119p00023640 (evm_27.TU.AmTr_v1.0_scaffold00119.8)
- - - - -2.21 - - - - - 0.54 0.7 0.97 -4.21 -1.82 - 1.2 0.51 0.35 -1.04 - 3.45
AMTR_s00119p00023680 (evm_27.TU.AmTr_v1.0_scaffold00119.9)
- - - -4.63 -2.4 - -5.45 - - - 1.5 0.91 0.45 -2.23 -3.0 -1.34 0.85 -0.69 -0.87 -1.18 - 3.53
AMTR_s00134p00117580 (evm_27.TU.AmTr_v1.0_scaffold00134.37)
-1.72 - - - -4.23 - - - - - 1.0 0.81 1.33 -4.85 -1.31 - 0.83 0.8 -1.23 -3.36 -4.0 3.44
AMTR_s00137p00037540 (evm_27.TU.AmTr_v1.0_scaffold00137.12)
- - -0.67 - -2.24 - -5.88 - -4.85 -5.96 1.43 1.61 -0.68 -3.52 -3.28 -3.99 1.45 -0.62 -1.07 -0.7 -0.61 3.22
AMTR_s00138p00035380 (evm_27.TU.AmTr_v1.0_scaffold00138.14)
- - - - - - - - - - -0.13 0.46 -0.71 -4.64 -4.43 - 2.16 -0.38 -0.06 -0.19 -1.54 3.54
AMTR_s00147p00062700 (evm_27.TU.AmTr_v1.0_scaffold00147.24)
- - - - -6.42 - - - -2.94 -3.49 0.68 0.07 -0.85 -4.35 -3.25 - 0.68 0.88 1.21 -1.82 -1.01 3.57
AMTR_s00149p00090220 (evm_27.TU.AmTr_v1.0_scaffold00149.76)
- - - - 0.65 - - - - - - - - - - - 0.92 - - - - 4.21
AMTR_s00165p00049610 (evm_27.TU.AmTr_v1.0_scaffold00165.30)
-2.92 - - -1.83 -6.0 - -5.6 - -8.35 -7.95 1.47 2.41 -0.4 -1.43 -5.24 -4.48 -1.2 -0.6 -3.0 -4.72 -5.85 3.46
AMTR_s00177p00015890 (evm_27.TU.AmTr_v1.0_scaffold00177.2)
- - - - -2.23 - -7.91 - -8.96 - 1.62 1.28 0.47 -0.2 -2.33 -4.78 1.31 -2.82 -3.21 -4.51 - 3.46
AMTR_s00184p00017650 (evm_27.TU.AmTr_v1.0_scaffold00184.1)
- - -3.88 -3.13 0.98 - - - -4.57 -3.59 0.6 2.15 0.73 -3.16 -0.8 -0.61 -0.83 0.76 0.79 - - 2.76
AMTR_s00193p00041220 (evm_27.TU.AmTr_v1.0_scaffold00193.9)
- - - -0.32 -8.5 - -24.63 - - - -1.76 -2.43 -1.97 -9.48 -9.98 -5.46 1.55 -0.75 0.43 -3.97 -1.32 3.92
AMTR_s00199p00022350 (evm_27.TU.AmTr_v1.0_scaffold00199.7)
- - - -2.61 - - -6.16 - - - 1.3 - 0.96 - - - 1.94 -0.0 - - - 3.65
AMTR_s00199p00026650 (evm_27.TU.AmTr_v1.0_scaffold00199.10)
- - - - -0.44 - -8.97 - -8.66 -7.56 1.02 -0.02 1.06 -4.73 -1.7 -0.36 -1.61 -0.08 -0.39 -0.84 -1.67 3.6
AMTR_s01004p00010660 (evm_27.TU.AmTr_v1.0_scaffold01004.2)
-1.42 -1.45 - 0.45 -3.12 - -6.36 - -5.68 -7.16 0.34 -3.15 1.14 -0.49 -1.05 -0.79 0.27 -1.59 -0.03 -0.43 0.79 3.23
AMTR_s01171p00002010 (evm_27.TU.AmTr_v1.0_scaffold01171.1)
-7.67 -1.88 -1.82 -2.18 0.23 - -8.05 -7.74 - -10.2 1.02 0.91 0.77 -1.86 -2.19 -1.42 -5.72 -6.09 -3.08 -2.66 -3.93 3.72
AMTR_s01171p00007730 (evm_27.TU.AmTr_v1.0_scaffold01171.2)
- -1.64 -1.73 -3.62 -0.22 - -8.91 -9.33 -11.34 -11.75 0.98 1.33 0.62 -2.05 -1.99 -1.08 -6.53 -6.97 -3.43 -2.75 -3.67 3.71
AMTR_s02715p00003090 (evm_27.TU.AmTr_v1.0_scaffold02715.1)
1.44 - -1.84 0.79 -19.47 - -30.38 - - - 0.64 - 1.23 -2.43 -3.97 - - - - -4.27 - 3.71
AMTR_s05215p00000460 (evm_27.TU.AmTr_v1.0_scaffold05215.1)
-4.6 - -3.16 -5.52 -4.35 - -9.3 - - -10.94 0.6 -0.11 1.98 -1.66 -0.45 -0.64 -0.68 1.07 0.4 -2.53 -2.06 3.21

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.