- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.26 | -0.77 | -0.66 | -0.95 | -0.34 | -0.13 | -0.18 | 0.07 | -0.02 | 0.34 | 0.08 | -0.45 | 2.11 | -1.41 | -2.13 | 1.0 | -1.39 | -0.9 | -1.21 | -0.68 | 0.85 | 0.53 | 0.8 | 0.9 | 0.89 | -0.84 | -0.49 | -0.87 | -0.55 | -0.6 | -1.02 | -1.09 | |
| -0.4 | -0.36 | -0.33 | -0.15 | 0.11 | -0.15 | 0.15 | 0.26 | 0.2 | 0.05 | -0.03 | -0.22 | 1.83 | -1.29 | -1.65 | 0.84 | -0.04 | -0.17 | -0.61 | -1.08 | 0.62 | -2.09 | -0.38 | -0.68 | 0.81 | -0.28 | 0.0 | 0.25 | 0.21 | 0.02 | -0.56 | -0.67 | |
| -0.38 | -0.38 | -0.76 | -0.57 | -0.08 | -0.1 | -0.74 | -1.13 | -0.81 | -0.83 | -0.82 | -0.88 | 2.49 | -0.09 | -2.74 | 0.9 | -0.09 | 0.27 | -0.75 | -2.83 | 0.95 | -4.72 | 1.41 | 1.22 | 0.55 | -1.29 | -0.81 | -0.82 | -0.77 | -0.6 | -0.62 | -0.48 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.