Heatmap: Cluster_323 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.06 -0.14 -0.38 -0.05 -0.24 -0.13 0.08 0.39 0.54 0.46 0.31 0.28 -0.82 -1.15 -0.87 -0.29 -0.2 -0.24 2.55 -4.35 -3.11 -2.69 -0.47 -0.56 -1.28 -0.39 -0.54 -0.54 -0.09 -0.12 0.36 0.62
0.64 0.01 0.24 -0.42 -0.06 -1.24 0.08 -0.08 -0.07 0.13 1.15 0.38 -5.72 -1.54 -3.85 -4.58 -0.82 0.23 3.06 -2.33 - - -1.7 -2.41 -1.88 -0.56 -1.7 -1.71 -0.11 0.14 1.04 0.71

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.