Heatmap: Cluster_221 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Aerial tissue - Light - ZT1	Aerial tissue - Light - ZT3	Aerial tissue - Light - ZT5	Aerial tissue - Light - ZT7	Aerial tissue - Light - ZT9	Aerial tissue - Light - ZT11	Aerial tissue - Dark - ZT1	Aerial tissue - Dark - ZT3	Aerial tissue - Dark - ZT5	Aerial tissue - Dark - ZT7	Aerial tissue - Dark - ZT9	Aerial tissue - Dark - ZT11	Roots	Root elongation and differentiation zone	Root meristematic zone	Aerial roots and rhizophores	Shoot tips	Microphyll	Strobili	Shoot apical meristem - AC	Shoot apical meristem - Core	Shoot apical meristem - P1	Stem - Top	Stem - Bottom	Whole plant	Aerial tissue - Stress - Dark	Aerial tissue - Stress - High light	Aerial tissue - Stress - Cont	Aerial tissue - Stress - 37C 1h	Aerial tissue - Stress - 37C 3h	Aerial tissue - Stress - 4C 1h	Aerial tissue - Stress - 4C 3h
Smo101351	-2.82	-	-1.67	-	-	-	-	-1.7	-1.69	-1.7	-	-	-	-	-	1.02	-1.25	-1.3	-0.24	0.9	-	2.84	-1.11	0.37	2.89	1.76	-	-	0.98	1.34	-1.29	-1.37
Smo118492	-0.97	-1.47	-1.35	-1.06	-0.33	0.25	0.59	0.48	0.26	0.22	-0.47	-0.38	-2.11	-2.35	-0.09	-1.71	-0.7	-0.82	-0.41	1.67	1.48	1.63	-0.97	-1.08	1.22	-1.06	-0.04	-0.19	-0.23	-0.28	-0.16	-0.67
Smo118663	-	-	-	-	-	-	-	-	-	-	-	-	-1.32	-	-	0.17	0.94	1.08	0.47	2.48	2.07	-	0.13	0.52	2.97	-	-	-	0.63	0.78	-0.23	-0.3
Smo123361	-2.01	-2.75	-2.0	-1.63	-0.74	0.31	0.25	0.28	-0.13	-0.16	-1.29	-1.21	-2.45	-3.86	-1.67	-1.93	-0.77	-0.12	-1.09	0.91	-0.65	2.35	-0.75	-1.12	2.77	-0.92	0.19	0.18	-0.05	0.13	-0.71	-1.4
Smo130426	-2.75	-2.48	-2.85	-1.94	-1.78	-1.83	-1.7	-2.66	-2.02	-2.21	-3.39	-2.58	-1.81	-3.18	-0.39	-1.68	-1.73	-1.25	-1.29	3.54	1.89	2.56	-2.1	-1.9	1.87	-2.4	-2.3	-2.18	-2.1	-1.96	-2.27	-2.29
Smo132827	-0.76	-0.86	-0.66	-0.73	-0.58	-0.51	-0.03	-0.66	-0.4	-0.59	-0.69	-1.01	-0.57	-0.12	0.55	-0.66	0.27	0.81	-0.46	1.36	0.99	0.83	-0.28	-0.25	1.02	-1.22	0.16	-0.21	-0.05	-0.16	0.12	0.44
Smo18420	-0.98	-0.78	-0.84	-0.63	-0.11	0.06	0.02	-0.17	-0.42	-0.72	-1.04	-1.15	-0.21	-1.53	1.23	-0.01	-0.4	-0.23	0.49	1.13	0.52	1.69	-0.23	0.01	1.38	-2.03	-0.91	-1.11	-0.29	-0.24	-0.44	0.0
Smo229819	-0.65	-0.53	-0.47	-0.41	-0.22	-0.29	-0.38	-0.34	-0.49	-0.47	-0.57	-0.61	0.33	0.11	0.37	0.67	-0.56	-0.26	0.05	1.11	0.81	1.13	-0.19	0.04	-0.21	0.85	0.15	0.25	-0.49	-0.43	-0.92	-1.07
Smo230578	-0.6	-0.6	-0.83	-0.67	-0.56	-0.45	-0.85	-0.71	-0.56	-0.37	-0.62	-0.53	0.49	0.17	-0.13	0.62	-0.71	-0.88	0.14	0.24	0.91	1.53	0.15	0.65	1.44	0.33	-0.31	-0.5	-0.67	-0.38	-0.58	-0.54
Smo231127	-2.86	-4.74	-5.41	-2.61	-4.93	-2.41	-3.93	-3.05	-3.34	-5.97	-3.24	-3.86	0.21	-2.69	-2.28	0.23	0.12	-0.34	0.54	3.14	1.36	2.05	0.17	-0.26	1.53	-1.28	-1.65	-2.02	-0.21	-0.01	-0.2	-0.23
Smo28116	-1.56	-2.31	-2.54	-2.69	-2.58	-2.29	-2.52	-2.48	-2.36	-1.61	-2.07	-2.03	-3.18	-4.01	-4.22	-2.39	-0.43	-0.37	-0.85	2.43	1.93	1.92	-1.09	-1.01	3.25	-2.03	-1.8	-1.53	-0.58	-0.6	-0.69	-0.65
Smo33940	-2.36	-2.07	-2.26	-1.61	-1.38	-1.24	-1.2	-1.32	-2.14	-1.63	-2.17	-2.27	0.4	-3.87	-2.03	0.02	-0.25	0.34	-0.12	2.28	1.44	1.14	-0.24	-0.07	2.41	-0.18	-0.29	-0.33	-0.81	-0.68	0.03	0.2
Smo402907	-0.42	-0.16	-0.23	-0.34	-0.25	-0.4	-0.22	-0.45	-0.3	-0.42	-0.41	-0.47	-0.68	-0.29	-0.83	-0.35	-0.35	0.07	1.04	1.92	0.6	0.13	-0.1	-0.34	1.41	-0.54	-0.32	-0.43	-0.34	-0.43	-0.64	-0.73
Smo403589	-1.23	-1.66	-1.91	-0.87	-0.11	-0.34	-0.97	-2.59	-0.39	-1.32	-0.99	-2.66	-	-	-0.6	-3.81	0.33	0.36	-3.04	3.5	3.05	-0.32	-4.9	-3.96	-3.02	-4.07	-1.38	-1.26	-0.93	-0.95	-2.49	-3.56
Smo404086	-0.97	-1.04	-1.0	-0.88	-1.5	-0.5	-0.83	-0.44	-0.39	-0.61	-0.58	-0.61	-0.01	-1.93	-1.72	-0.12	-0.66	-0.45	0.76	2.14	0.34	1.88	-0.44	-0.56	1.91	-0.09	-0.38	-0.34	-0.57	-0.64	-0.92	-1.23
Smo407586	-0.77	-2.7	-2.06	-3.3	-2.82	-2.27	-1.95	-0.96	-2.92	-2.07	-2.52	-1.31	0.21	-0.74	-0.29	0.51	-0.1	-0.14	1.06	2.77	0.31	1.15	-0.76	-0.19	1.36	-0.72	0.13	-0.55	-0.18	0.31	0.0	0.16
Smo407838	-0.36	-0.4	-0.35	-0.3	-0.14	-0.03	-0.4	-0.18	-0.07	-0.04	-0.1	-0.19	0.52	-0.58	0.19	0.05	-0.67	-1.04	-0.37	1.19	0.14	1.53	0.04	0.24	0.97	0.27	-0.47	-0.55	-0.6	-0.66	-0.95	-0.82
Smo408741	-2.04	-1.14	-0.42	-0.19	-0.29	-0.16	0.48	-0.59	-0.48	-0.7	-0.86	-1.05	-1.53	-2.29	-1.38	-1.28	0.6	-0.58	-0.48	2.09	1.17	1.13	-0.79	-0.5	1.61	0.58	-0.83	-0.75	-0.31	0.16	-0.05	-0.54
Smo409613	-0.94	-0.28	-0.28	-0.03	-0.19	-0.03	0.16	0.16	0.35	-0.23	0.1	-0.41	-1.49	-1.34	-1.19	-2.47	-0.54	-	-0.13	-0.81	1.08	0.99	0.48	0.35	2.15	-0.07	0.65	0.28	-0.52	-0.3	-1.23	-1.36
Smo410990	-1.32	-0.22	-1.94	-0.85	0.29	0.1	0.74	0.66	0.5	-0.61	-0.78	-1.06	-0.78	-0.84	-0.89	-1.9	-0.51	0.13	-1.76	-1.4	0.22	0.88	0.64	0.27	2.18	-0.93	0.83	0.96	-0.85	-0.23	-1.22	-1.1
Smo413586	-2.57	0.26	-4.33	-4.02	-1.41	-1.57	-0.74	-1.44	-0.65	0.17	-0.11	-2.94	-	-2.4	-0.69	-2.72	-0.59	-0.72	-0.37	1.4	-0.39	2.81	-1.91	-0.6	2.2	0.48	0.78	0.6	-1.14	-0.44	-0.39	-0.9
Smo414024	-4.66	-	-4.56	-3.22	-4.08	-2.01	-2.32	-2.92	-2.76	-4.12	-1.83	-3.64	-0.37	-2.38	-1.2	-1.79	-0.36	-1.41	-0.09	1.85	2.34	2.62	-0.27	-0.92	2.7	-3.88	-3.26	-	0.38	-0.07	-0.33	-0.07
Smo415192	-1.95	-1.67	-2.6	-2.72	-0.7	-0.3	-0.7	-0.66	-0.18	-1.15	-0.97	-1.96	-2.8	-3.02	-1.64	-2.72	-1.1	-0.75	-1.24	1.73	2.64	1.91	-1.07	-1.61	2.46	-1.42	0.01	-0.67	-0.61	-0.64	-0.54	-1.08
Smo416679	-1.52	-3.15	-2.26	-1.0	-2.55	0.26	-0.44	-0.05	0.68	0.27	-0.55	-0.72	-2.94	-15.51	-1.87	-2.46	-1.16	-0.62	-1.19	1.36	-1.23	2.73	-1.16	-2.07	2.49	-0.09	0.45	-0.11	0.2	-0.2	-1.68	-4.49
Smo421564	-2.6	-	-	-	-	-	-0.24	-1.4	-0.49	0.94	0.74	-0.74	-	-	0.92	-1.12	-	-	-0.28	-	-	3.47	-	-	3.09	-	-	-	-1.27	0.35	-1.26	-0.3
Smo422538	-1.89	-1.75	-1.77	-1.22	-0.78	-0.75	-0.93	-1.0	-1.13	-1.34	-1.75	-1.53	-0.85	-2.25	-1.83	-0.52	0.01	-0.13	-0.27	2.02	1.93	1.56	-0.29	-0.33	2.42	-0.37	-0.66	-0.68	-0.25	-0.15	-0.96	-1.08
Smo424021	-1.16	-1.57	-0.69	-1.05	-1.93	-0.78	-0.99	0.67	-0.9	-2.09	-1.37	-1.4	-0.95	-2.22	-1.14	-1.74	-1.7	-2.01	-0.44	1.67	1.93	1.51	-0.26	-0.9	2.8	-1.07	0.59	0.55	-1.81	-1.61	-2.3	-1.36
Smo424147	-0.42	-0.77	-0.91	-0.5	-0.17	-1.2	-1.86	-1.15	-1.3	-1.04	-0.85	-1.0	-0.02	-2.08	-0.84	-0.13	-0.5	-0.11	0.72	2.26	1.71	0.51	-1.01	-0.73	1.91	0.44	-1.42	0.12	-0.14	-0.73	-1.02	-1.83
Smo426590	-5.5	-	-5.72	-5.81	-	-2.82	-2.63	-5.59	-3.89	-4.06	-4.22	-2.63	-1.55	-2.58	0.15	-2.0	-0.88	0.52	0.26	2.32	1.62	2.29	-0.92	-0.36	2.82	-1.63	-0.04	-3.06	0.28	0.13	-1.01	-0.57
Smo429179	-2.97	-4.38	-	-2.34	-	-4.04	-3.35	-1.67	-3.81	-	-2.93	-2.78	-4.1	0.01	0.01	-0.7	-4.04	-2.2	-0.59	2.5	2.61	2.23	-1.79	-0.82	1.64	1.85	0.94	-0.45	-2.77	-2.04	-3.27	-4.39
Smo429596	-2.33	-2.04	-3.82	-1.43	-	-2.23	-2.4	-3.75	-2.82	-2.49	-3.36	-1.86	0.18	-0.49	0.15	0.08	-0.8	-1.67	0.94	2.37	1.81	-0.42	-0.41	0.77	2.17	1.0	0.46	0.37	-1.42	-0.9	-0.71	-0.78
Smo431202	-1.44	-2.42	-1.89	-1.67	-0.68	-0.73	-1.12	-0.81	-0.79	1.14	0.22	-1.06	-0.4	-2.41	-2.11	-0.66	-1.76	-	-0.27	0.4	1.01	2.68	-1.57	-1.0	3.02	-1.56	-0.39	-1.02	-2.89	-2.09	-1.63	-1.92
Smo431517	-0.14	-0.93	-2.4	-1.89	-0.39	-1.07	-2.48	-1.3	-3.62	-0.22	-0.06	0.04	-3.01	-2.02	-	-	-1.86	-	-	2.09	3.35	1.38	-3.38	-1.56	2.63	-	-	-	-	-1.42	-0.78	-3.47
Smo431583	-0.82	-0.87	-1.06	-1.21	-0.69	-0.46	-0.56	-0.95	-0.95	-1.13	-0.71	-1.12	-2.22	-1.92	0.04	-1.3	-0.56	-0.85	-0.31	2.21	1.16	1.43	-1.16	-0.95	2.65	-0.43	-0.14	0.05	-0.98	-0.76	-1.18	-1.37
Smo444671	-0.6	-0.74	-1.0	-0.82	-0.65	-0.61	-0.76	-0.95	-0.63	-0.79	-0.69	-0.77	-0.88	-1.31	-0.86	-0.86	-1.47	-2.43	-0.74	2.4	1.35	1.84	-1.15	-1.11	1.65	0.63	0.65	0.39	-1.52	-1.62	-1.03	-0.79
Smo48869	-0.94	-0.68	-0.67	-0.36	-0.52	-0.2	-0.58	-0.49	-0.42	-0.43	-0.63	-0.48	0.24	-0.84	-0.52	0.41	-0.15	-0.22	0.15	0.33	0.29	1.68	0.06	0.18	1.07	0.24	-0.12	-0.14	0.03	0.12	-0.03	-0.05
Smo53072	-0.88	-0.96	-0.35	-0.08	0.09	0.28	-0.01	0.03	-0.11	-0.05	-0.46	-0.81	-0.72	0.13	-0.04	-1.07	-0.15	-0.57	-0.48	0.6	1.16	1.48	0.13	-0.01	0.86	-0.81	0.34	0.11	-0.74	-0.54	-0.48	-0.13
Smo69660	-0.82	-1.12	-0.92	-0.75	-0.45	-0.65	-0.63	-0.82	-0.49	-0.88	-0.42	-0.59	-2.89	-3.85	-3.36	-2.47	0.16	0.45	-1.19	1.96	2.26	0.95	-0.74	-1.1	1.86	-0.62	-0.77	-0.33	0.51	0.21	-0.27	-1.1
Smo78854	-0.46	-0.59	-0.42	-0.24	0.17	-0.04	-0.06	0.16	-0.07	-0.05	-0.15	-0.48	-0.24	-0.64	0.01	0.28	-0.37	-1.2	0.04	1.43	-0.06	1.14	-0.18	-0.23	1.17	0.12	-0.26	-0.77	-0.41	-0.37	-0.47	-0.41
Smo84137	-1.21	-1.2	-0.62	-0.95	-0.88	-0.7	-1.11	-0.98	-1.16	-1.25	-1.07	-1.24	0.12	0.52	0.37	-0.34	-0.25	1.0	-0.45	1.58	1.12	1.62	-0.18	-0.22	1.82	-1.74	-1.09	-1.57	-0.4	-0.6	-0.28	0.04
Smo89459	-1.19	-1.37	-1.61	-1.48	-1.82	-1.56	-2.13	-1.75	-1.35	-1.07	-1.41	-1.0	0.71	-0.39	-0.88	1.13	-0.6	-0.67	0.3	2.34	1.44	-1.01	-0.36	-0.34	2.01	-0.62	-1.29	-1.39	-0.09	0.14	0.22	0.52
Smo92683	-0.01	0.04	-0.07	0.04	0.04	0.06	-0.15	-0.22	-0.12	-0.18	-0.17	-0.3	-0.16	0.36	0.14	-0.0	-0.54	-0.77	-0.35	0.73	-0.01	1.41	-0.13	-0.14	1.09	-0.6	-0.3	-0.29	-0.67	-0.63	-0.47	-0.41
Smo96166	-0.45	-0.46	-1.78	-1.12	-0.26	-0.38	-0.68	-0.52	-0.23	-0.01	0.23	-0.33	-2.43	-2.59	-1.53	-1.07	-0.9	-0.87	-0.11	-0.05	0.58	2.43	-1.41	-1.31	0.61	1.08	1.63	0.45	-0.96	-0.88	-0.18	0.27
Smo96962	-0.62	-0.72	-0.61	-0.01	-0.94	-0.16	-0.51	-0.62	-0.74	-0.4	-0.85	-0.56	-0.1	-0.26	0.09	0.9	-0.9	-1.19	0.46	2.05	0.46	0.51	-0.48	-0.0	1.29	0.24	0.31	0.06	-0.42	-0.68	-1.29	-1.46

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.