- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.82 | - | -3.85 | -1.97 | -2.79 | -1.81 | -0.4 | 0.01 | 1.32 | 0.13 | -1.04 | -2.53 | -3.54 | - | -4.12 | -3.42 | -0.66 | 1.49 | -1.21 | 0.57 | 2.96 | -1.24 | -0.91 | -1.37 | 0.7 | 0.45 | 0.98 | 0.98 | -0.35 | -0.28 | -0.44 | -0.09 | |
| -0.79 | -1.39 | - | -0.26 | -2.11 | -1.57 | -1.74 | 1.26 | 1.22 | 0.09 | -3.32 | -1.68 | -2.04 | - | -1.22 | - | -3.18 | 2.33 | 1.77 | - | 2.95 | - | -1.13 | -1.52 | - | -1.1 | 0.21 | 1.07 | -2.21 | -0.58 | -0.6 | -3.25 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.