Heatmap: Cluster_202 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Aerial tissue - Light - ZT1	Aerial tissue - Light - ZT3	Aerial tissue - Light - ZT5	Aerial tissue - Light - ZT7	Aerial tissue - Light - ZT9	Aerial tissue - Light - ZT11	Aerial tissue - Dark - ZT1	Aerial tissue - Dark - ZT3	Aerial tissue - Dark - ZT5	Aerial tissue - Dark - ZT7	Aerial tissue - Dark - ZT9	Aerial tissue - Dark - ZT11	Roots	Root elongation and differentiation zone	Root meristematic zone	Aerial roots and rhizophores	Shoot tips	Microphyll	Strobili	Shoot apical meristem - AC	Shoot apical meristem - Core	Shoot apical meristem - P1	Stem - Top	Stem - Bottom	Whole plant	Aerial tissue - Stress - Dark	Aerial tissue - Stress - High light	Aerial tissue - Stress - Cont	Aerial tissue - Stress - 37C 1h	Aerial tissue - Stress - 37C 3h	Aerial tissue - Stress - 4C 1h	Aerial tissue - Stress - 4C 3h
Smo143272	-1.53	-0.92	-0.74	0.03	0.45	0.58	0.18	-0.16	-0.6	-0.77	-1.18	-1.43	0.05	0.92	0.07	0.37	-0.25	-0.69	0.65	-1.37	0.42	-3.21	0.04	-0.12	2.03	0.01	0.48	0.53	-0.72	-0.56	-0.74	-0.58
Smo143934	-0.36	-0.0	-0.02	0.08	0.13	0.02	-0.02	-0.02	0.08	-0.25	-0.28	-0.31	0.31	0.01	0.17	0.48	0.25	0.03	0.28	-0.84	-1.37	-2.49	0.32	0.4	-0.66	0.55	0.66	0.84	-0.01	0.11	-0.74	-0.93
Smo149735	-0.43	-0.36	-0.22	-0.26	0.07	0.35	-0.03	-0.02	-0.43	-0.51	-0.7	-0.77	0.87	0.27	0.34	0.88	-0.63	-0.17	1.03	-2.33	-1.8	-0.53	-0.11	0.16	0.15	0.24	0.73	0.67	-0.43	-0.24	-0.34	0.01
Smo163708	-0.57	-0.15	-0.32	0.27	0.43	0.3	-0.25	-0.5	-0.73	-0.83	-0.97	-1.01	-0.2	0.35	-0.05	0.66	0.14	-1.15	1.32	-2.13	-0.91	-2.83	0.45	0.34	1.08	-0.17	0.13	0.09	-0.26	-0.16	0.63	0.48
Smo166276	-0.27	-0.35	-0.3	-0.33	-0.13	-0.18	-0.13	0.03	-0.17	-0.19	-0.47	-0.37	0.05	0.69	0.28	0.26	-0.6	-0.83	0.87	-1.04	0.68	-1.06	-0.23	-0.04	1.53	0.06	0.38	0.45	-0.51	-0.45	-0.77	-0.57
Smo170659	0.25	0.06	-0.55	-0.43	-0.54	-0.63	-1.09	-1.48	-1.05	-1.19	-0.9	-1.04	-0.85	1.14	-1.7	-0.13	0.12	0.21	1.84	-3.67	0.68	-4.76	-0.08	-0.05	1.8	-0.18	-0.04	-0.32	0.27	0.23	0.44	-0.13
Smo171056	-0.49	-0.16	-0.06	-0.02	0.15	0.17	-0.03	0.12	-0.22	-0.15	-0.5	-0.5	0.49	1.01	0.16	-0.03	-0.84	-0.97	1.41	-1.04	-0.39	-1.46	-0.62	-0.29	1.32	0.31	0.44	0.54	-0.79	-0.72	-1.15	-1.13
Smo173107	-0.09	-0.07	-0.14	0.01	-0.08	-0.12	-0.27	-0.07	-0.17	-0.24	-0.34	-0.31	0.73	0.92	0.05	0.83	-0.38	-0.66	0.53	-2.07	0.79	-0.95	0.09	0.2	1.1	-0.66	-0.87	-0.97	-0.04	-0.09	-0.34	-0.35
Smo228108	-0.32	-0.02	-0.09	0.04	-0.02	-0.01	0.04	0.16	0.14	0.11	-0.13	-0.17	0.32	0.75	0.23	0.62	-0.33	-0.5	0.41	-0.62	0.13	-0.83	-0.12	0.0	0.81	-0.18	-0.33	-0.2	-0.33	-0.19	-0.68	-0.25
Smo231443	-0.44	-0.37	-0.08	-0.05	-0.02	0.12	0.15	-0.21	0.14	-0.3	-0.8	-0.9	0.75	0.17	-1.68	0.28	0.17	-0.79	1.59	-2.97	0.59	-2.07	-0.56	-0.96	1.15	-0.45	0.28	0.23	-0.02	0.09	0.23	-0.25
Smo235874	-0.58	-0.18	-0.45	0.2	-0.08	0.3	-0.35	-0.56	-0.56	-1.54	-0.53	-1.51	-0.66	1.82	-0.49	0.5	-1.81	-1.48	1.69	-0.2	-0.98	-	0.31	0.97	0.91	0.37	0.86	1.16	-2.27	-1.75	-2.85	-1.85
Smo266998	-0.24	0.17	0.06	0.27	0.16	-0.04	-0.28	-0.55	-0.54	-0.64	-0.48	-0.54	-0.19	0.29	-0.16	0.48	-0.19	-0.59	0.67	-3.06	-2.79	-2.09	0.06	0.19	0.46	0.52	0.79	0.98	-0.31	-0.08	0.69	0.46
Smo270443	-0.65	0.23	0.23	0.33	0.59	0.3	-0.56	-0.64	-0.99	-1.12	-1.22	-1.43	1.14	-0.99	-1.95	0.51	0.12	-0.58	1.04	-7.88	-4.46	-5.64	0.77	0.49	-1.83	0.3	1.46	1.34	-0.3	-0.27	0.15	0.01
Smo402577	-0.54	-0.24	-0.58	-0.49	-0.35	0.14	-0.23	-0.36	-0.25	-0.11	-0.92	-0.33	1.04	0.21	0.73	1.08	-0.63	0.85	1.45	-	-1.32	-1.73	-0.05	0.32	0.52	-0.4	0.47	0.06	-0.29	-0.31	-0.82	-0.79
Smo403072	-0.26	-0.17	-0.45	-0.07	0.08	-0.19	-0.18	-0.32	-0.16	-0.15	-0.06	-0.21	0.49	-0.2	-0.08	0.63	-0.11	0.16	0.3	-0.59	-0.98	-4.81	0.57	0.68	-0.14	0.68	0.48	0.21	0.11	0.16	-0.22	-0.2
Smo403730	-0.09	-0.2	0.47	0.2	-0.07	0.56	-0.24	0.07	-0.9	-1.58	-1.69	-0.18	-0.28	-0.16	0.24	0.64	-1.17	-0.1	2.04	-	0.49	-	-0.21	0.17	1.97	-1.44	0.18	-0.23	-0.8	-1.14	-1.46	-2.01
Smo404968	-0.43	-0.19	0.01	0.11	0.18	0.01	-0.08	-0.02	-0.06	-0.33	-0.37	-0.63	0.17	0.05	-0.0	0.37	0.17	-0.65	0.67	0.1	-0.87	-0.55	0.07	-0.13	-0.03	0.72	0.55	0.73	-0.29	-0.25	-0.49	-0.22
Smo405409	-0.49	-0.37	0.05	-0.12	0.19	0.13	-0.18	-0.0	0.23	-0.35	-0.26	-0.23	0.16	-0.95	0.32	1.07	-0.06	-2.27	0.62	-5.96	-1.92	-	0.5	0.54	-0.24	0.65	0.78	1.25	0.47	0.46	-1.67	-1.48
Smo405842	-0.22	-0.25	-0.52	-0.18	-0.03	-0.04	-0.14	-0.14	-0.38	-0.27	-0.37	-0.41	0.62	0.52	0.01	0.71	-0.44	-0.38	0.64	-2.41	-0.33	-1.33	0.0	0.14	1.27	-0.2	0.16	0.13	-0.18	-0.15	0.35	0.18
Smo407018	0.05	-0.0	-0.76	-1.41	-1.73	-0.43	-0.9	0.09	-0.25	0.59	-0.29	-0.77	0.87	0.12	-1.27	0.57	-2.69	-0.53	1.71	-	-	-	0.05	1.46	1.43	0.63	1.26	0.22	-1.81	-1.95	-0.37	-0.35
Smo408914	-1.1	-1.11	-0.88	-0.66	-0.37	-0.25	0.0	-0.42	-0.37	-0.49	-0.58	-0.88	0.53	-0.29	-1.31	1.05	-0.1	0.03	0.83	-2.14	0.94	-0.46	0.06	-0.0	0.99	0.09	0.69	0.84	0.26	0.22	-0.28	-0.32
Smo413146	-0.98	-0.67	-2.57	-0.54	0.66	-0.71	-1.84	-0.47	-0.52	-2.17	-1.33	-2.04	0.79	0.95	0.2	1.71	-0.82	-4.45	1.81	-	-	-	-0.12	0.21	1.25	0.47	1.56	0.88	-0.58	-0.43	-1.01	-0.96
Smo413178	-0.51	-1.78	-0.26	-0.01	-2.18	-1.32	0.07	-0.31	-2.6	-4.24	-2.13	-0.42	0.77	1.94	-1.74	0.26	-1.73	0.09	1.34	-	0.68	-0.53	-0.83	-1.64	1.48	1.34	1.49	1.29	-2.02	-1.76	-2.68	-2.82
Smo413502	-0.73	-0.45	-0.09	0.13	0.37	0.68	-0.23	-0.57	-0.37	-1.0	-1.15	-1.04	-0.27	-0.42	0.54	-0.13	-0.23	1.05	1.21	-	-	-	0.07	-0.13	1.91	0.05	0.96	0.7	-0.82	-1.22	-0.01	-1.03
Smo420341	-0.77	-0.68	-0.25	-0.28	-0.01	0.25	0.02	0.3	0.3	0.2	-0.16	-0.35	-0.18	-0.05	0.45	-0.07	-0.12	-0.49	0.09	-4.43	-0.99	-0.92	-0.04	0.21	1.08	0.11	0.91	0.32	-0.36	-0.33	0.28	0.55
Smo426141	0.27	0.28	0.06	0.0	0.28	0.24	-0.3	0.22	-0.17	-0.21	-0.17	-0.08	0.33	0.62	0.13	0.52	-0.44	-0.11	0.25	-1.62	-1.18	-3.15	0.05	0.07	0.92	-0.12	0.24	0.13	-0.35	-0.3	-0.39	-0.04
Smo426703	-1.04	-1.42	-0.8	-	-0.91	-0.13	0.66	-0.35	-0.44	-1.21	-	-	-1.42	1.65	0.41	-0.4	-	-0.58	2.5	-	-0.26	-	-2.26	-2.4	2.22	1.66	-0.06	1.09	-0.22	-0.57	-	-
Smo428672	-0.81	0.06	0.42	0.06	-0.46	0.21	0.1	-0.21	-0.12	-0.77	-0.76	-1.15	0.13	-1.36	0.19	1.3	-0.25	-0.88	1.13	-2.98	-6.0	-0.54	0.63	0.29	-1.43	0.95	0.66	1.3	0.23	0.5	-1.86	-2.53
Smo438595	-0.29	-0.84	-0.57	-0.47	0.16	-0.51	-0.24	-0.48	-0.56	-0.6	-0.84	-0.63	0.32	0.26	0.41	0.46	-0.39	-0.69	1.39	-1.0	0.35	0.03	0.02	0.05	0.73	-0.38	0.25	0.15	-0.09	-0.08	0.4	0.45
Smo438801	-0.2	-0.16	-0.35	-0.11	0.03	-0.22	-0.05	-0.16	-0.16	-0.27	-0.35	-0.35	-0.1	-0.0	0.22	0.12	-0.59	-0.81	0.26	-1.21	-2.64	-1.24	0.34	0.57	1.08	0.35	0.34	0.38	-0.44	-0.28	0.82	0.86
Smo439296	-0.83	-0.65	-0.31	-0.2	0.36	0.09	-0.51	-0.4	-0.09	-0.71	-0.6	-0.87	0.93	0.25	-1.0	0.77	0.04	-0.44	1.14	-7.55	-0.74	-3.46	0.64	1.07	0.12	0.37	0.72	0.73	0.05	0.03	-0.76	-0.7
Smo442089	-0.08	0.17	-0.08	-0.08	0.18	-0.39	-0.99	-0.83	-0.79	-1.06	-0.7	-1.03	1.0	0.45	-2.31	1.3	-0.9	-0.52	1.47	-1.78	-1.03	-	0.44	1.12	1.07	0.52	0.33	0.5	-0.8	-0.6	-1.08	-0.59
Smo446892	-0.5	0.05	0.16	0.41	0.46	0.44	-0.07	-0.18	-0.46	-0.44	-0.72	-0.67	0.54	1.06	0.97	0.56	-0.2	-1.16	0.27	-1.8	-0.59	-1.15	-0.06	-0.16	0.79	-0.36	0.44	0.4	-0.89	-0.57	-0.59	-0.45
Smo65497	-0.52	-0.52	-0.8	-0.56	-0.64	-0.39	-0.66	-0.37	-0.42	-0.41	-0.54	-0.72	0.84	0.35	-1.85	0.85	0.01	0.28	0.16	-3.26	0.29	-4.89	0.89	0.91	0.99	0.24	0.1	0.12	0.37	0.4	0.17	0.13
Smo74468	-0.13	-0.38	-0.62	-0.02	0.12	-0.01	-0.69	-0.19	-0.04	-0.45	-0.2	-0.1	0.11	-0.23	0.54	0.84	-0.22	-0.25	1.33	-5.41	-0.81	-5.64	0.21	0.02	0.6	0.93	0.61	0.32	0.16	-0.05	-1.13	-0.58
Smo76799	0.01	0.01	-0.67	-0.31	-0.18	-0.38	-0.83	-0.01	-0.87	-0.66	-0.57	-0.91	1.34	0.33	0.14	1.13	-0.34	-1.62	1.68	-5.08	-4.75	-	0.33	0.0	0.75	0.17	1.2	1.01	-0.4	-0.25	-1.88	-2.03
Smo77309	-0.48	0.06	-0.12	-0.09	-0.05	0.05	-0.21	-0.27	-0.31	-0.52	-0.45	-0.8	-0.08	0.27	-0.78	0.63	-0.45	0.1	0.79	-4.31	-0.78	-3.85	0.84	0.85	-0.06	0.65	1.19	1.1	-0.25	-0.16	-0.88	-0.89
Smo78585	-0.59	-0.32	-0.37	0.22	0.18	0.06	0.13	-0.17	-0.22	-0.39	-0.48	-0.85	0.01	0.41	-0.09	0.3	-0.14	-0.5	0.86	-0.73	-0.73	-0.98	-0.4	-0.63	0.81	0.46	1.19	0.89	-0.45	-0.43	-0.35	-0.03
Smo79308	-0.15	-0.37	-0.18	-0.33	-0.13	-0.04	-0.43	-0.09	-0.65	-0.33	-0.51	-0.65	0.18	-0.14	0.7	0.66	-0.06	-0.67	0.67	-0.24	-3.03	-2.09	0.03	0.19	-0.25	1.04	0.87	0.9	0.18	0.34	-0.4	-0.41
Smo79774	-0.36	0.15	-1.42	-0.23	-0.17	-0.14	-0.24	-0.01	-0.21	-0.42	-0.38	-0.31	0.82	-0.32	0.59	1.08	0.07	0.23	0.5	-	-4.33	-	0.29	0.48	-1.1	0.81	0.61	0.99	0.29	0.39	-0.58	-0.73
Smo81258	-0.25	-0.41	-0.39	-0.69	-0.54	-0.38	-0.35	-0.25	-0.36	-0.17	-0.32	-0.36	-0.39	0.95	0.13	0.55	-0.36	0.41	1.35	-0.11	0.8	-2.27	-0.06	-0.13	-0.19	-0.06	-0.3	-0.85	0.36	0.33	0.19	0.21
Smo84501	-0.28	-0.44	-1.0	-0.05	-0.46	-0.14	-0.14	-0.44	-0.46	0.14	-0.15	0.18	0.35	-0.83	-0.87	0.63	0.17	-0.03	0.46	-2.92	0.04	-3.62	0.27	0.33	0.97	0.59	0.35	0.25	0.45	0.3	0.14	0.13
Smo86039	-0.08	-0.19	-0.41	-0.1	-0.19	-0.08	-0.46	-0.06	-0.28	-0.13	-0.15	0.02	0.56	0.0	-2.03	0.63	0.11	-0.35	0.41	-1.77	-0.24	-3.97	0.48	0.72	-0.11	0.67	0.2	0.26	0.4	0.38	0.25	-0.07
Smo89723	-0.29	-0.22	-0.22	0.1	0.03	0.11	-0.0	0.04	-0.15	-0.35	-0.5	-0.36	0.3	0.92	0.49	0.46	-0.09	-0.17	0.35	-1.14	-0.47	-1.93	-0.02	0.09	0.99	-0.39	0.29	0.1	-0.07	0.02	-0.36	-0.31
Smo90245	0.28	0.16	-0.06	-0.08	-0.37	-0.29	-0.45	-0.1	-0.14	-0.35	-0.08	-0.01	0.67	-0.27	-1.54	0.46	-0.07	-0.08	0.41	-2.63	-0.9	-2.9	0.49	0.82	1.05	0.13	0.18	0.16	0.15	0.23	-0.19	-0.09
Smo91328	-0.51	-0.69	-0.39	-0.46	-0.24	-0.07	-0.05	0.11	-0.0	-0.22	-0.28	-0.37	0.76	-0.16	-0.04	0.96	-0.29	-0.88	0.9	-1.05	-1.31	-2.0	0.47	0.53	-0.31	0.62	0.63	0.87	0.18	0.22	-0.7	-0.91
Smo96034	-1.14	-0.82	0.02	-0.06	0.33	0.09	0.01	-0.46	-0.05	-0.47	-0.82	-0.74	-0.35	-0.79	0.84	0.5	0.27	-0.6	1.23	-0.79	-4.77	-4.55	0.43	-0.07	-1.33	0.58	0.66	1.51	0.22	0.51	-0.43	-0.48

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.