Heatmap: Cluster_249 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
- - - - - - - - - - - - - - 0.7 - - - 4.15 - - - - - - - - 3.65 - - - -
- -1.51 -0.2 - - - -0.5 -1.66 -0.45 -0.69 - - - - 0.03 -1.18 -1.21 -1.33 3.61 - - - - 0.33 0.69 - -0.14 2.45 0.91 0.67 0.21 -
- - - - - - - - 0.46 1.45 - - - - - - - - 4.28 - - - - - - - - 3.08 - - - -
- - - - - - - - - - - - 0.75 - - - - - 4.35 - - - 0.54 - - - - 2.83 0.49 - - -
-0.11 -0.34 -0.3 - 0.44 - 0.87 0.39 -2.24 -1.99 -2.03 0.1 - -0.05 -0.61 - - -1.88 3.59 - - - - - - - 1.15 2.82 - - - -
- - - - - - - - - 2.74 - - - - - - - - 4.66 - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.