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Heatmap: Cluster_135 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
1.37 1.76 1.4 1.47 2.7 1.8 0.53 2.23 1.12 1.92 1.52 1.71 74.88 44.37 6.63 93.88 0.37 0.13 7.72 0.0 0.0 0.0 0.35 3.32 1.83 9.35 4.53 3.77 0.87 2.09 0.77 1.22
0.05 0.03 0.04 0.05 0.01 0.01 0.05 0.11 0.25 0.06 0.08 0.12 1.57 0.91 0.0 2.7 0.02 0.32 0.04 0.0 0.0 0.0 0.02 0.01 0.0 0.59 0.15 0.0 0.05 0.1 0.04 0.0
0.01 0.0 0.0 0.0 0.11 0.01 0.0 0.02 0.04 0.0 0.07 0.05 0.84 0.01 0.02 26.0 0.07 0.12 0.38 0.03 0.0 0.0 0.01 0.03 0.09 0.08 0.16 1.39 0.01 0.06 0.02 0.01
0.21 0.2 0.49 0.7 0.87 0.7 0.04 0.36 0.28 0.3 0.29 0.26 29.58 2.14 4.87 57.56 0.02 0.0 0.41 0.0 0.0 0.0 0.02 0.17 1.51 0.52 0.69 1.87 0.1 0.19 0.02 0.04
6.14 5.13 2.82 2.77 3.82 3.27 3.2 6.92 6.77 6.41 6.1 7.78 50.51 2.27 53.22 66.81 1.34 1.16 13.28 0.0 26.01 0.06 1.65 2.87 22.35 16.28 13.68 11.09 5.57 6.3 9.56 5.04
0.16 0.22 0.11 0.28 0.16 0.12 0.04 0.06 0.0 0.28 0.0 0.12 4.01 3.44 0.05 6.43 0.04 0.0 0.47 0.0 0.0 0.0 0.31 1.19 0.16 0.17 0.2 0.0 0.08 0.2 0.04 0.07
0.98 0.57 1.59 1.58 1.08 0.78 0.78 1.91 1.35 1.35 0.94 0.67 32.91 18.96 1.62 63.43 0.06 0.0 0.04 0.0 0.0 0.0 0.0 0.58 0.39 0.85 0.39 0.78 0.18 0.38 0.02 0.33
1.57 1.17 1.21 1.91 4.58 2.02 2.05 2.11 2.16 1.44 2.29 1.52 38.75 29.69 7.72 130.35 0.73 1.01 1.41 0.0 0.0 1.22 0.72 1.54 5.37 5.05 7.79 9.13 1.74 2.15 0.31 0.59
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.23 0.3 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.14 0.0 0.0
4.08 3.19 2.58 5.19 6.84 4.82 3.58 7.89 5.0 7.54 5.64 3.24 60.93 52.75 15.84 316.33 0.52 0.02 2.79 0.0 0.0 0.0 0.21 8.27 0.9 5.48 2.32 2.11 2.12 6.21 0.6 1.91
13.98 16.65 18.46 14.51 14.32 15.26 18.4 10.75 12.56 14.54 14.22 13.79 5.94 6.27 5.1 30.04 6.82 4.25 6.85 7.67 2.32 2.35 16.61 20.85 10.15 6.49 12.15 16.27 8.83 11.51 7.11 7.27
0.29 0.08 0.05 0.03 0.14 0.09 0.07 0.2 0.07 0.22 0.09 0.09 7.31 0.0 0.01 687.69 0.2 0.0 0.99 0.0 0.35 0.0 0.0 0.08 1.08 4.64 6.63 26.0 0.15 0.44 0.0 0.05
0.98 1.74 0.41 0.58 0.11 0.56 0.36 0.25 0.23 0.87 0.43 0.6 45.49 22.31 0.16 65.92 0.12 0.0 3.56 0.0 0.0 0.0 2.18 15.1 1.12 0.29 0.63 0.0 0.7 1.16 1.15 1.44
55.53 53.77 39.23 47.06 50.04 36.65 35.65 49.84 52.93 50.7 44.93 41.92 706.84 287.65 51.6 1072.72 42.63 18.64 94.92 2.46 37.95 0.0 45.16 97.67 54.2 39.86 28.26 25.37 121.41 129.35 41.73 50.15
8.49 9.17 11.38 9.14 9.59 10.15 5.81 8.43 6.73 8.89 8.69 6.97 7.19 3.63 3.09 8.8 6.82 6.82 10.83 11.86 2.99 4.78 10.77 11.41 5.53 8.38 6.57 8.74 7.3 7.61 7.01 5.9
2.31 3.03 2.15 1.65 0.88 1.74 0.85 0.71 1.06 0.65 1.69 1.18 15.95 15.03 1.52 38.61 0.95 0.5 2.63 0.0 0.0 0.0 0.62 0.1 0.0 0.77 0.91 1.67 1.26 2.0 1.47 1.4
34.61 27.06 23.56 30.82 22.89 27.17 28.85 28.96 22.28 33.07 33.18 24.07 378.91 173.15 148.76 546.04 26.94 34.54 42.73 11.48 9.4 2.41 19.45 28.15 23.21 41.07 25.36 41.88 30.28 32.01 14.17 10.75
0.42 0.0 0.45 0.42 0.0 0.0 0.0 0.0 3.28 0.0 0.0 2.14 17.69 9.62 0.74 37.91 1.36 1.46 2.28 1.26 0.0 0.0 0.28 0.5 0.0 0.0 0.0 0.0 0.28 2.18 1.94 1.84
0.45 0.97 0.0 0.3 0.17 0.5 0.13 0.49 0.29 0.38 0.24 0.2 10.13 8.52 0.72 24.57 1.04 3.45 7.56 0.0 0.77 0.0 1.83 1.45 0.82 0.9 0.97 0.51 2.18 1.8 0.78 0.68
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.68 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.36 0.18 0.33 0.29 0.49 0.2 0.38 0.5 0.3 0.46 0.51 0.45 4.03 1.4 4.66 20.59 0.02 0.04 0.27 2.13 0.32 0.23 0.0 0.04 0.2 0.53 0.22 0.4 0.02 0.03 0.0 0.02
0.01 0.0 0.01 0.01 0.0 0.0 0.04 0.0 0.0 0.02 0.01 0.0 5.86 0.0 0.01 5.52 0.01 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.05 0.0 0.0 0.0 0.01 0.0 0.0
0.83 0.74 0.52 1.24 1.29 1.44 0.81 0.8 0.94 2.56 1.85 1.25 4.44 0.15 22.71 28.48 0.41 1.1 1.34 0.0 0.0 0.7 1.63 3.51 0.45 1.44 1.05 2.25 0.62 0.72 0.94 1.91
0.27 0.12 0.25 0.32 0.19 0.17 0.58 0.05 0.12 0.23 0.11 0.13 1.09 0.08 0.73 0.34 0.0 0.03 0.82 0.0 0.0 0.0 0.08 0.0 0.0 0.97 0.0 0.0 0.15 0.04 0.23 0.04
0.0 0.05 0.0 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.66 0.27 0.36 1.32 0.05 0.0 0.65 0.0 0.0 0.0 0.05 0.05 0.0 0.22 0.14 0.0 0.0 0.1 0.1 0.05
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.44 0.39 0.51 0.49 0.79 0.71 0.36 0.64 0.69 0.67 1.02 0.72 1.93 0.77 0.62 33.94 0.63 0.71 0.58 0.17 2.04 0.81 0.35 0.67 1.11 2.97 2.09 5.15 0.61 0.46 0.59 0.45
0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.14 0.0 0.13 1.76 0.1 0.05 0.06 0.0 0.0 0.0 0.14 0.1 0.0 0.0 0.18 0.0 0.19 0.06 0.06 0.18
3.61 4.8 5.11 5.12 3.79 4.82 4.53 5.9 7.61 7.85 6.72 6.09 9.77 7.17 7.31 27.06 2.93 3.2 5.3 6.98 1.45 0.72 3.61 4.92 4.04 11.07 3.92 4.64 4.1 5.47 3.25 3.64
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.12 0.04 0.03 6.99 0.0 0.07 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.15 0.03 0.03 0.0 0.0
0.51 0.31 0.79 0.3 0.42 0.53 0.68 0.62 1.24 0.6 1.36 0.95 1.86 0.03 0.07 7.78 0.09 0.04 0.82 0.0 0.0 0.0 0.04 0.04 0.33 0.83 0.32 1.12 0.04 0.08 0.16 0.18
0.02 0.0 0.02 0.0 0.0 0.0 0.02 0.0 0.1 0.05 0.0 0.02 0.22 0.0 0.13 0.13 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.01 0.05 0.01 0.0
0.27 0.62 0.42 0.46 0.69 0.51 0.22 0.24 0.22 0.27 0.17 0.26 0.13 0.11 0.0 3.61 0.0 0.0 0.02 0.0 0.14 0.0 0.03 0.0 0.06 0.0 0.12 0.17 0.0 0.0 0.0 0.0
0.03 0.0 0.0 0.0 0.0 0.02 0.07 0.05 0.11 0.05 0.02 0.0 3.18 0.0 0.0 3.26 0.02 0.08 0.06 0.0 0.0 0.0 0.02 0.02 0.0 0.3 0.15 0.56 0.18 0.04 0.02 0.0
5.82 10.29 9.76 9.71 9.63 11.52 7.73 7.18 7.15 7.92 6.43 7.01 8.88 3.88 2.57 6.55 3.6 5.84 3.57 6.6 0.66 1.27 11.71 9.69 3.98 2.67 8.3 9.35 3.55 4.11 2.86 3.97
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.3 0.14 0.02 6.72 0.37 0.29 0.6 0.0 0.0 0.0 2.55 3.45 0.0 0.03 0.19 0.1 0.6 0.88 0.5 0.52
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.68 0.0 0.0 1.71 0.0 0.0 0.12 0.66 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.37 0.24
3.24 3.39 1.75 3.78 3.55 3.67 2.91 3.78 4.24 3.64 5.51 3.37 47.8 2.47 1.54 76.49 4.76 3.92 12.97 0.49 3.8 1.36 4.3 4.66 8.52 5.05 2.57 5.13 3.68 5.64 3.67 3.97
8.1 6.38 2.32 5.16 5.81 2.34 4.35 5.7 3.34 1.02 4.29 3.2 38.59 31.34 3.18 77.91 1.51 6.84 4.29 0.0 16.05 0.0 3.78 2.71 12.75 5.01 4.27 12.27 4.97 6.01 2.46 2.81
29.24 39.92 40.37 34.64 37.54 34.52 22.88 24.99 27.01 24.92 27.04 22.07 59.03 14.79 1.27 157.57 10.38 6.38 14.35 1.27 3.07 2.06 65.47 91.19 24.63 23.58 38.02 43.85 15.25 17.73 11.35 11.57
0.07 0.14 0.31 0.04 0.36 0.13 0.1 0.12 0.0 0.14 0.05 0.04 3.14 2.27 0.31 5.87 0.22 0.22 1.39 0.0 0.13 0.0 0.26 0.33 0.18 0.14 0.14 0.0 0.42 0.25 0.11 0.08
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.14 0.0 0.0 10.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2.3 1.96 1.67 2.72 2.81 1.86 2.11 2.81 2.14 2.96 2.38 2.33 16.02 7.53 5.67 21.32 0.98 1.19 4.3 0.23 0.04 0.23 1.2 0.76 1.06 2.32 2.25 3.63 1.38 1.34 1.09 1.36
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 18.65 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
9.25 6.8 4.89 8.35 7.6 11.26 12.91 13.25 13.43 10.13 7.72 8.52 20.93 6.72 13.93 40.28 10.56 9.67 9.84 1.18 4.78 9.23 10.21 9.08 13.87 14.34 14.88 16.82 11.1 11.25 6.78 5.64
6.63 6.01 5.34 7.2 9.72 9.33 10.21 8.05 7.78 8.19 8.06 5.79 71.07 33.8 9.82 146.97 5.23 6.71 9.32 0.24 1.76 8.07 4.99 6.68 7.93 11.25 21.09 24.52 5.49 6.41 3.63 3.51
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.77 0.0 0.02 0.0 0.22 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.68 0.0 0.02 0.0 0.02
10.09 14.11 16.7 14.14 10.69 12.69 16.51 9.5 12.35 9.78 12.33 10.31 6.74 10.63 5.03 45.48 6.57 4.94 6.85 1.16 1.04 1.05 16.9 25.27 5.14 6.24 10.3 15.38 7.98 11.85 6.9 6.77
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.24 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.57 0.43 0.75 0.73 1.33 0.52 0.48 0.72 0.57 0.62 0.57 0.75 79.6 12.18 3.35 217.09 0.12 0.98 1.66 0.2 0.0 1.63 0.03 0.34 0.22 1.16 1.16 3.29 0.44 0.73 0.18 0.4
1.37 1.24 0.43 0.79 1.32 0.68 0.9 1.28 1.3 1.84 0.71 0.92 6.9 2.39 8.68 11.44 2.48 2.33 3.54 2.09 1.23 0.0 1.3 1.84 2.22 3.6 2.01 0.0 1.18 4.4 1.72 0.73
0.12 0.0 0.12 0.05 0.0 0.0 0.0 0.19 0.0 0.0 0.2 0.0 8.48 0.07 0.0 70.31 0.0 0.0 0.14 0.0 0.19 0.69 0.0 0.0 0.0 0.17 0.61 1.08 0.0 0.07 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)