- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.09 | - | - | - | -0.81 | - | - | - | - | - | - | 1.33 | - | - | - | - | 0.18 | - | -0.89 | - | - | - | 0.06 | 0.73 | 2.63 | - | - | 3.37 | 1.37 | 1.94 | - | -0.97 | |
| -0.85 | -0.03 | 0.25 | 0.14 | -1.39 | -2.97 | 0.42 | 0.59 | -4.9 | -1.68 | -2.93 | -2.14 | -5.6 | -2.85 | -2.61 | - | 1.09 | 1.58 | -0.27 | - | - | - | -0.88 | -1.48 | 1.38 | -0.13 | 1.13 | 2.97 | -2.06 | 0.91 | -1.14 | -0.22 | |
| -0.85 | -0.03 | 0.25 | 0.14 | -1.39 | -2.97 | 0.42 | 0.59 | -4.9 | -1.68 | -2.93 | -2.14 | -5.6 | -2.85 | -2.61 | - | 1.09 | 1.58 | -0.27 | - | - | - | -0.88 | -1.48 | 1.38 | -0.13 | 1.13 | 2.97 | -2.06 | 0.91 | -1.14 | -0.22 | |
| -3.09 | -3.1 | - | -2.16 | 0.16 | -0.23 | 0.13 | 0.28 | -1.0 | -0.84 | -0.34 | -3.06 | 0.31 | 0.1 | 0.19 | -0.1 | -1.88 | 0.99 | 1.4 | - | - | 0.29 | -1.49 | 0.4 | 1.3 | -1.26 | 0.88 | 1.93 | 0.01 | 1.35 | -1.35 | -0.67 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.