Heatmap: Cluster_201 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00163440 (evm_27.TU.AmTr_v1.0_scaffold00001.150)
- - - - -2.4 4.08 0.7 - -0.19 0.5 -3.67 - -4.85 -2.05 -3.17 - - - -3.1 -4.15 - -1.77
AMTR_s00002p00203730 (evm_27.TU.AmTr_v1.0_scaffold00002.198)
-0.1 -1.61 -1.07 -3.42 -2.33 2.54 1.4 -1.63 0.1 0.29 -1.05 -1.02 -1.21 -0.49 -1.87 0.1 -1.15 -0.15 -0.46 0.86 0.2 -1.34
AMTR_s00003p00245690 (evm_27.TU.AmTr_v1.0_scaffold00003.277)
- - - - - 3.92 -2.14 1.14 -2.1 -2.56 -1.87 - -5.97 -2.8 -4.75 - -1.5 1.29 -0.69 -5.32 - -3.45
AMTR_s00004p00127590 (evm_27.TU.AmTr_v1.0_scaffold00004.116)
- - - 0.32 -0.73 3.21 -0.6 -1.34 0.26 -0.11 -1.81 -2.08 -0.49 -0.16 1.71 -1.71 -0.51 -2.66 -3.45 -3.15 -3.33 -0.2
AMTR_s00004p00156880 (evm_27.TU.AmTr_v1.0_scaffold00004.165)
-1.39 -1.41 -0.18 -3.71 -1.56 2.43 1.12 -0.42 0.47 0.46 0.35 0.13 -0.73 -0.06 -1.2 -0.61 0.03 0.05 -0.76 -0.92 -1.49 -1.75
AMTR_s00009p00093720 (evm_27.TU.AmTr_v1.0_scaffold00009.37)
0.2 0.6 0.4 -3.63 -1.61 1.59 1.18 -1.41 0.32 0.43 0.44 0.56 -0.67 -0.63 -2.33 -0.49 0.4 0.21 -0.48 -1.64 -1.43 -1.09
AMTR_s00009p00173620 (evm_27.TU.AmTr_v1.0_scaffold00009.103)
- - - - -0.15 3.84 1.64 -0.22 -0.06 0.05 - -2.04 -9.09 -2.25 -1.69 - - - - -7.72 - -
AMTR_s00009p00266090 (evm_27.TU.AmTr_v1.0_scaffold00009.391)
-4.72 -0.55 0.07 -2.94 -0.02 1.7 0.91 -0.81 0.13 0.19 -0.04 -0.54 0.13 0.47 -0.14 -0.52 -0.43 0.07 -0.22 0.14 -0.26 -0.23
AMTR_s00015p00223130 (evm_27.TU.AmTr_v1.0_scaffold00015.74)
0.31 -0.05 0.26 -0.47 -0.06 1.97 0.65 -0.21 -0.24 -0.18 -0.76 -0.56 -0.23 0.32 -0.32 -0.39 -1.75 -0.75 -0.6 -0.14 -1.12 -0.02
AMTR_s00015p00245820 (evm_27.TU.AmTr_v1.0_scaffold00015.98)
1.09 1.84 1.16 -6.34 -5.43 3.04 0.58 -1.67 -1.17 -0.91 -3.27 -2.02 -3.85 -1.24 -4.7 -5.17 -3.49 -1.43 -0.79 -1.39 -2.02 -1.27
AMTR_s00019p00159010 (evm_27.TU.AmTr_v1.0_scaffold00019.153)
-3.75 -2.99 -0.93 -1.88 -1.1 2.28 0.6 -2.93 -0.32 -0.3 -0.25 -0.65 -0.36 0.09 -0.43 -1.13 0.12 0.78 0.53 1.01 0.51 -2.05
AMTR_s00019p00239490 (evm_27.TU.AmTr_v1.0_scaffold00019.348)
- - - -0.77 -0.61 3.11 -0.33 - -0.31 -0.4 0.4 0.13 -0.69 -2.16 -1.78 -0.92 -0.38 -0.17 -0.29 -2.4 1.42 -1.53
AMTR_s00023p00251180 (evm_27.TU.AmTr_v1.0_scaffold00023.242)
- - - - -4.05 3.16 0.14 -0.63 1.66 2.35 -2.7 -1.77 -1.64 -2.99 -5.32 -1.34 -3.04 - -3.26 - - 0.56
AMTR_s00024p00253100 (evm_27.TU.AmTr_v1.0_scaffold00024.353)
0.41 - - -2.74 -0.14 3.64 -3.29 -0.34 -3.68 - -2.15 - -1.6 -0.79 -1.95 -0.93 - -0.56 -0.07 -1.53 0.87 -1.27
AMTR_s00029p00161320 (evm_27.TU.AmTr_v1.0_scaffold00029.205)
-0.17 -0.21 -0.29 -2.53 -0.52 2.07 1.38 0.38 0.46 0.54 -0.63 -0.49 -0.56 -0.12 0.56 -1.3 -0.44 -0.94 -1.67 -1.41 -1.76 -0.84
AMTR_s00029p00247200 (evm_27.TU.AmTr_v1.0_scaffold00029.445)
0.1 0.28 0.76 -1.16 -0.44 2.3 0.87 -0.87 -0.53 -0.73 -0.03 0.06 -0.66 -0.37 -0.98 -0.59 -0.53 -0.25 -0.22 -1.29 -2.04 -0.8
AMTR_s00031p00020980 (evm_27.TU.AmTr_v1.0_scaffold00031.3)
- - 1.45 -0.65 -0.33 1.7 0.65 -1.36 0.57 0.1 -0.52 -0.05 -0.18 0.09 0.14 -0.52 -0.24 -0.24 -0.49 -0.55 -0.26 -0.46
AMTR_s00033p00099570 (evm_27.TU.AmTr_v1.0_scaffold00033.42)
-0.19 1.65 0.81 0.13 -0.96 3.04 -0.01 1.19 -0.1 -0.1 -3.53 - -3.97 -1.95 -1.49 - -4.7 - -5.91 -1.54 -4.91 -4.15
AMTR_s00036p00240870 (evm_27.TU.AmTr_v1.0_scaffold00036.196)
- - - - -2.89 3.57 0.51 1.53 0.92 1.5 -3.83 -2.95 -7.07 -3.21 -1.37 - - - - - -3.3 -2.45
AMTR_s00037p00128540 (evm_27.TU.AmTr_v1.0_scaffold00037.54)
- - - - -2.54 3.0 0.03 - 1.99 1.07 -2.04 - -0.63 0.03 -1.31 - -1.84 - -2.45 0.39 1.18 -1.4
AMTR_s00037p00187160 (evm_27.TU.AmTr_v1.0_scaffold00037.93)
-0.16 -3.66 -6.09 -1.6 -5.38 3.32 2.4 0.21 0.41 0.35 -4.8 -2.36 -3.52 -0.48 -4.98 -5.24 -4.01 - -2.18 -2.49 -4.03 -5.5
AMTR_s00043p00206710 (evm_27.TU.AmTr_v1.0_scaffold00043.68)
- - - -0.88 -0.54 3.97 - - - -3.07 0.16 - -3.08 -1.57 -1.48 - - - - -0.98 1.22 -2.18
AMTR_s00043p00208100 (evm_27.TU.AmTr_v1.0_scaffold00043.69)
- - - - -0.9 4.25 - - - - - - -3.89 - -3.45 - - - - -3.88 1.1 -
AMTR_s00043p00208200 (evm_27.TU.AmTr_v1.0_scaffold00043.70)
- -4.26 - 0.69 1.73 3.43 - - - - - - -3.17 - -2.98 - - - - -3.61 2.57 -
AMTR_s00046p00214050 (evm_27.TU.AmTr_v1.0_scaffold00046.140)
- - - - -0.55 4.11 0.24 - 0.18 -0.31 -2.98 - - -3.28 -0.49 - - - - -5.5 - -
AMTR_s00047p00175150 (evm_27.TU.AmTr_v1.0_scaffold00047.98)
-0.95 - - - -0.24 3.54 0.11 - -0.01 -0.19 -2.83 1.96 -2.4 -2.16 -3.7 - -4.97 - 0.23 -3.32 -2.34 -4.38
AMTR_s00048p00219290 (evm_27.TU.AmTr_v1.0_scaffold00048.201)
- - -2.24 - 0.49 3.36 -0.07 - 1.69 1.38 - - -4.52 -2.91 -3.39 - - - -1.49 -0.47 0.91 -3.17
AMTR_s00052p00196120 (evm_27.TU.AmTr_v1.0_scaffold00052.91)
1.03 - - 0.92 0.29 2.09 0.85 0.57 0.27 0.51 -0.84 -0.11 -0.54 -0.49 -1.46 -0.8 -0.58 -1.46 -1.12 -1.36 -0.86 -1.24
AMTR_s00052p00203680 (evm_27.TU.AmTr_v1.0_scaffold00052.102)
- - - - 1.66 4.02 -2.23 - -1.7 -0.52 - - - - -2.86 - 0.34 - - - - -
AMTR_s00054p00048870 (evm_27.TU.AmTr_v1.0_scaffold00054.17)
0.41 -0.13 - -10.05 -1.86 2.49 1.45 -0.46 0.72 0.98 -0.06 -0.41 -0.69 -0.86 -1.93 -1.07 -0.85 -0.01 -0.53 -3.18 -1.44 -1.2
AMTR_s00058p00096230 (evm_27.TU.AmTr_v1.0_scaffold00058.51)
1.68 -0.59 - -6.48 0.46 2.65 -0.62 - 0.01 -0.36 0.5 0.25 -0.53 -0.55 -0.13 -1.6 0.24 -1.53 -2.32 -3.05 -1.38 -0.8
AMTR_s00059p00060020 (evm_27.TU.AmTr_v1.0_scaffold00059.37)
-0.29 -2.18 -0.27 -0.25 -0.12 1.55 0.84 -0.98 -0.19 -0.02 0.09 -0.06 -0.02 -0.0 -0.23 0.02 0.4 -0.49 -0.37 -0.25 -0.32 -0.07
AMTR_s00059p00181280 (evm_27.TU.AmTr_v1.0_scaffold00059.193)
1.64 -0.67 -7.32 -7.72 -1.24 2.41 1.01 -1.48 0.03 0.21 -0.26 -0.02 -0.42 -0.55 -1.49 0.05 -0.9 -0.44 -0.19 -1.31 -1.64 -1.2
AMTR_s00059p00207430 (evm_27.TU.AmTr_v1.0_scaffold00059.237)
-0.48 -9.33 - -4.55 -3.23 3.43 2.22 -0.75 0.96 1.2 -5.15 -4.48 -8.09 -0.59 -4.05 - -7.62 - -7.84 -7.65 - -5.65
AMTR_s00060p00098750 (evm_27.TU.AmTr_v1.0_scaffold00060.42)
0.41 - - -4.39 -0.29 2.31 1.71 -4.72 0.15 0.35 -0.16 -1.63 -1.7 -1.14 -0.02 -3.2 -0.37 0.63 0.23 -0.15 0.48 -1.68
AMTR_s00061p00189810 (evm_27.TU.AmTr_v1.0_scaffold00061.217)
0.48 -3.0 -2.64 -4.6 -0.57 2.12 1.14 -1.28 1.2 1.05 -0.35 -0.74 0.43 0.02 -0.86 -0.41 0.25 -1.93 -1.98 -1.71 -1.77 -0.11
AMTR_s00062p00209960 (evm_27.TU.AmTr_v1.0_scaffold00062.229)
0.53 -0.85 -0.73 -4.58 -0.22 2.21 1.36 -1.11 0.41 0.12 -1.43 -1.04 -0.48 -0.05 1.26 -1.99 -1.06 -2.04 -0.89 0.15 -2.2 -0.61
AMTR_s00066p00106720 (evm_27.TU.AmTr_v1.0_scaffold00066.92)
0.45 -1.75 -1.93 0.51 -0.68 0.89 1.75 -0.9 0.41 0.63 0.05 -0.06 -0.64 0.08 -0.59 0.17 -0.52 -0.81 -0.87 0.01 -1.33 -0.54
AMTR_s00067p00026720 (evm_27.TU.AmTr_v1.0_scaffold00067.11)
- - -5.68 -6.25 -5.26 3.89 1.94 1.02 -1.16 -1.75 - - -5.68 -2.07 - -2.44 - - - - - -4.59
AMTR_s00067p00167050 (evm_27.TU.AmTr_v1.0_scaffold00067.171)
- - - 1.27 0.26 2.92 -3.19 0.4 0.56 -0.87 -0.26 0.54 -0.81 -2.55 1.32 - 0.22 - - -2.64 - -0.88
AMTR_s00073p00159250 (evm_27.TU.AmTr_v1.0_scaffold00073.45)
- - - - -1.26 3.57 1.63 - 0.7 0.41 -2.57 -2.38 -2.17 0.45 -0.51 - -4.52 - -2.03 -1.5 -2.73 -2.58
AMTR_s00074p00069230 (evm_27.TU.AmTr_v1.0_scaffold00074.17)
-0.74 1.11 -0.62 -1.11 0.4 2.23 1.13 -3.19 -0.18 -0.1 -0.41 -0.34 -0.34 -0.11 -0.68 -0.4 -0.62 -1.09 -0.63 -0.63 -1.72 -0.63
AMTR_s00074p00197100 (evm_27.TU.AmTr_v1.0_scaffold00074.125)
- - - -7.11 -1.92 3.82 -0.42 1.27 0.22 -0.22 -1.98 -0.49 -3.82 -2.21 -3.27 -1.82 -3.17 -1.98 -2.67 - - -1.94
AMTR_s00080p00131430 (evm_27.TU.AmTr_v1.0_scaffold00080.57)
2.31 1.75 - - -3.0 2.96 1.69 - 0.33 0.04 - - - -2.03 - - - - - - - -6.12
AMTR_s00099p00143820 (evm_27.TU.AmTr_v1.0_scaffold00099.131)
-1.63 -0.4 -6.39 -5.26 -0.85 1.95 1.22 -2.52 0.56 0.5 -0.07 0.09 -0.53 0.11 -0.72 0.58 0.3 -0.14 -0.3 -0.53 -0.37 -0.38
AMTR_s00100p00068910 (evm_27.TU.AmTr_v1.0_scaffold00100.15)
1.02 -0.22 -0.59 -0.2 0.55 1.03 1.86 0.06 -0.17 0.31 -0.59 -0.32 -1.31 -0.02 -1.25 0.17 -0.58 -0.51 -1.28 -0.89 -2.55 -1.33
AMTR_s00105p00113080 (evm_27.TU.AmTr_v1.0_scaffold00105.59)
0.16 -1.07 -1.27 0.5 -0.84 1.22 1.99 -0.12 0.47 0.88 -1.2 -1.08 -0.93 0.5 -0.05 -1.54 -0.43 -0.59 -1.05 -0.53 -1.77 -0.91
AMTR_s00111p00116570 (evm_27.TU.AmTr_v1.0_scaffold00111.89)
0.64 0.12 -1.56 -2.33 -1.1 2.51 0.9 -0.14 0.27 0.29 -1.63 -1.74 0.05 0.7 -1.08 0.64 -2.1 -1.61 -1.17 -0.92 -2.58 -1.18
AMTR_s00129p00050230 (evm_27.TU.AmTr_v1.0_scaffold00129.24)
0.58 0.01 -0.17 0.37 0.21 1.49 1.16 -1.35 0.27 0.44 -0.2 -0.4 -0.56 -0.4 -0.5 -0.63 -0.96 -0.54 -0.42 -0.39 -1.17 -0.75
AMTR_s00130p00049420 (evm_27.TU.AmTr_v1.0_scaffold00130.18)
0.16 -1.39 - -9.53 -3.94 3.05 2.59 -0.13 0.9 0.95 -4.88 -2.1 -3.99 -0.72 -4.87 -5.99 -4.0 -3.03 -5.07 -4.62 - -2.89
AMTR_s00142p00045170 (evm_27.TU.AmTr_v1.0_scaffold00142.24)
-1.04 -0.66 -0.62 0.16 -0.86 1.49 0.9 -0.36 0.41 0.57 -0.31 -0.5 -0.13 0.44 0.7 -0.52 -1.48 -0.47 -0.42 -0.24 -0.76 -0.12
AMTR_s00149p00072640 (evm_27.TU.AmTr_v1.0_scaffold00149.52)
-4.82 -0.17 0.24 - -4.04 3.26 1.72 0.8 1.02 0.97 -5.41 -5.62 -2.9 -1.27 -6.71 -3.6 -2.49 -4.81 -6.2 -7.66 - -1.75
AMTR_s00163p00055500 (evm_27.TU.AmTr_v1.0_scaffold00163.20)
-2.37 -0.35 -0.41 -2.58 -1.43 2.02 0.94 -0.19 -0.22 -0.15 -0.16 -0.31 -0.44 -0.69 -1.97 0.22 -0.14 1.01 0.68 -0.1 -0.1 -1.99
AMTR_s00180p00044420 (evm_27.TU.AmTr_v1.0_scaffold00180.24)
- - - - 0.5 4.06 -0.72 - 1.42 -1.53 - - - - -2.15 - - - - - - -
AMTR_s00204p00014180 (evm_27.TU.AmTr_v1.0_scaffold00204.2)
-0.53 1.12 - - -0.04 2.65 0.06 - -0.73 -0.02 -2.26 0.22 -1.74 0.3 -1.18 -1.67 - -0.3 0.72 0.77 0.36 -2.73
AMTR_s00254p00018400 (evm_27.TU.AmTr_v1.0_scaffold00254.4)
1.12 - 0.82 0.54 -0.36 2.86 -0.05 -0.56 0.45 0.18 -0.81 - -1.04 -0.63 -1.77 - 0.28 - -1.77 -3.59 -0.95 -1.6
AMTR_s00560p00011110 (evm_27.TU.AmTr_v1.0_scaffold00560.1)
- - - - -0.34 2.98 1.59 0.08 0.92 0.85 -0.48 -1.34 -0.08 0.33 -1.0 -1.9 -1.47 -1.21 -2.51 -3.3 -2.1 -2.67
AMTR_s03415p00005360 (evm_27.TU.AmTr_v1.0_scaffold03415.1)
-2.58 - - -3.94 -3.22 3.41 2.52 -0.56 0.78 0.66 - - -4.78 -0.5 -2.41 - - - - -2.52 -2.69 -4.85

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.