Heatmap: Cluster_259 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.11 -0.2 0.23 0.06 0.24 0.21 -0.01 0.19 -0.1 0.14 -0.02 -0.16 -0.15 0.6 1.01 0.09 -0.08 -1.08 -0.22 -1.21 -0.1 0.29 -0.02 -0.25 -0.29 0.01 0.14 0.23 -0.23 -0.31 -0.45 -0.41
0.06 0.11 0.57 0.1 0.29 -0.19 0.18 -0.13 -0.02 0.17 -0.19 0.14 -1.88 1.47 1.78 -1.0 -0.84 -1.39 -0.79 -7.92 0.43 -3.12 -2.52 -2.43 -5.05 -0.45 1.53 0.54 -1.28 -1.09 0.4 0.55
-0.03 -0.14 0.45 -0.08 0.41 -0.17 -0.05 -0.24 0.09 -0.42 -0.13 0.09 -1.4 1.19 1.81 -1.34 -0.94 -2.49 -1.22 - 0.39 1.28 -2.53 -2.93 -2.47 -0.92 1.31 0.29 -1.42 -1.32 0.6 0.64
-0.21 0.02 -0.2 -0.02 0.1 0.44 0.52 0.31 -0.01 0.54 -0.16 -0.44 -0.95 0.26 1.35 -0.59 -0.12 -0.51 0.26 -0.64 0.13 -1.45 -0.51 -0.97 -1.34 -0.03 0.86 1.04 -0.61 -0.51 -0.64 -0.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.