Heatmap: Cluster_238 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.75 -0.86 -0.72 -0.37 -0.02 0.13 0.56 0.3 0.15 -0.11 -0.09 -0.49 -1.48 -1.37 0.62 -0.52 -1.17 -1.84 1.16 0.43 -0.29 0.61 -1.16 -0.64 1.08 0.12 1.1 0.5 -1.03 -0.78 0.29 0.29
-0.34 -0.33 -0.61 -0.15 -0.35 -2.44 0.75 0.59 -1.02 -0.47 0.11 -0.12 -4.18 -3.11 1.52 -2.08 -0.86 -1.59 1.83 -1.48 -1.06 1.14 -0.65 -0.38 -0.11 0.99 1.17 0.65 -0.71 -0.71 -0.24 -0.95

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.