Heatmap: Cluster_60 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.02 -0.03 -0.18 -0.01 0.04 -0.14 -0.42 -0.42 -0.06 0.01 -0.04 0.01 1.39 2.06 0.81 1.69 -1.23 -0.43 -0.75 -1.31 -1.47 -3.73 -0.31 0.37 0.19 -1.11 -1.25 -1.2 -1.08 -0.83 -1.61 -1.24
-0.08 -0.27 -0.46 -0.44 -0.32 -0.78 -0.53 -0.33 -0.23 0.17 0.18 -0.02 1.35 1.67 -0.27 1.79 -1.51 -0.82 0.72 -1.97 -1.26 -1.83 0.44 0.29 -0.96 0.23 -0.4 -0.76 -0.57 -0.5 -0.63 -0.72
-0.02 0.25 0.07 -0.0 0.15 0.16 -0.23 -0.32 -0.37 -0.38 -0.48 -0.47 0.95 1.4 -0.08 1.14 -0.31 -0.32 0.12 -1.53 -0.81 -3.33 0.28 0.33 0.19 -0.1 -0.06 -0.11 -0.5 -0.38 -0.5 -0.2
-1.12 -0.88 -1.3 -1.13 -0.84 -1.08 -1.64 -0.83 -1.34 -0.92 -0.67 -1.19 2.7 2.45 0.23 2.38 -2.34 -2.53 -1.44 -3.34 -4.5 -3.9 -1.72 -1.1 1.3 -0.19 -0.68 -1.24 -1.55 -1.36 -0.71 -1.19
-0.58 -1.8 -0.85 -0.05 -1.64 -1.12 -2.0 -0.35 -0.92 -0.82 -0.21 -0.96 2.18 2.91 1.38 2.77 - - -3.72 - - - -4.3 -3.5 -2.21 -0.67 -0.37 0.51 -2.49 -2.3 -3.52 -4.33
-0.16 0.23 0.25 0.53 0.39 0.58 0.37 0.32 0.39 0.47 0.2 -0.06 1.87 1.52 0.36 1.04 -0.7 -0.84 -0.96 -6.72 -1.73 -0.82 -0.98 -2.04 -2.74 -1.04 -0.42 -0.41 -1.45 -1.04 -1.22 -0.84
-0.48 -0.49 -0.3 -0.18 0.71 -0.49 -0.85 -1.0 -0.62 -0.97 -0.38 -0.85 2.59 1.7 1.55 2.14 -0.38 -1.98 -0.76 - - - -1.32 -1.2 - -0.19 -0.91 -0.75 -1.24 -0.58 -1.09 -1.39
-0.17 -0.04 -0.05 0.22 0.09 0.01 -0.5 -0.61 -0.13 -0.14 -0.17 -0.18 1.99 1.08 0.83 1.06 -1.4 -1.97 0.13 0.25 -0.78 -1.16 -0.22 0.38 0.62 -0.37 -1.13 -0.98 -1.24 -1.29 -1.37 -1.18
-0.85 0.1 -0.28 -0.26 -0.38 -0.16 -1.02 -0.72 -1.03 -0.9 -0.87 -1.2 1.71 2.43 2.09 1.75 -1.67 -1.78 0.16 - -0.32 - -0.45 -0.43 -1.96 -0.77 0.18 -0.75 -2.16 -1.66 -1.94 -1.81
0.19 -0.05 -0.04 -0.1 -0.01 0.15 -0.23 -0.36 -0.35 -0.34 -0.43 -0.37 1.69 2.09 0.22 1.57 -0.66 -0.63 -0.16 -6.42 -5.63 -4.79 0.74 -0.01 -1.24 -1.72 -1.05 -0.55 -0.37 -0.29 -1.14 -0.52
- - - -4.79 -3.48 -4.22 - - - - -3.57 - 3.98 3.27 1.22 1.54 - - -2.64 - - - - - - - -3.06 -0.46 - - - -
-1.66 -1.19 -1.54 -1.43 -1.94 -1.04 -1.19 -1.02 -1.25 -0.96 -0.86 -1.49 2.6 1.56 2.32 2.8 -2.01 -2.3 -0.47 -7.17 -3.41 - -2.64 -2.13 0.61 -1.5 -0.93 -0.87 -1.89 -1.58 -1.73 -0.92
-2.09 -2.58 -2.13 -1.3 -1.33 -1.55 -1.85 -1.7 -1.9 -1.63 -1.54 -1.94 1.84 2.64 2.76 3.15 -5.6 -7.21 -2.33 - - - -5.97 -2.41 -0.55 -0.86 -1.46 -0.72 -3.34 -3.01 -4.84 -3.9
-0.91 -1.15 -0.47 -0.36 -0.0 -0.26 0.32 -0.28 -0.72 -0.79 -0.77 -0.9 2.44 2.21 0.26 0.38 -0.93 -0.73 0.17 -0.07 -2.25 -2.35 -1.02 -1.08 -0.56 1.18 -0.06 -0.27 -1.12 -0.86 -2.21 -2.4
-1.52 -2.48 -1.75 -2.24 -1.15 -1.94 -2.5 -1.24 -2.58 -1.97 -1.94 -2.27 2.59 2.89 -2.58 2.97 -3.71 -3.46 -0.53 - - - -0.78 1.32 -0.63 -0.83 -0.41 -0.6 -2.83 -1.93 -2.62 -2.14
0.14 0.29 0.04 -0.01 -0.03 -0.11 -0.31 -0.08 -0.1 -0.04 -0.01 -0.04 1.18 1.27 -0.21 1.19 -0.27 -0.09 -0.08 -0.89 -0.64 -0.42 0.27 0.21 -0.34 -1.17 -1.33 -1.49 -0.31 -0.19 -0.24 -0.38
-0.7 -0.7 -1.31 -0.81 -0.71 -0.78 -1.46 -0.73 -0.65 -0.44 -0.55 -0.61 2.43 2.84 1.82 2.06 -3.02 -3.36 -1.21 - -0.37 - -2.33 -1.72 -0.44 -0.33 -1.37 -3.56 -2.64 -1.65 -2.8 -3.29
-1.11 -1.45 -1.45 -0.74 -0.44 -0.98 -0.8 -0.93 -1.02 -0.76 -0.58 -1.23 3.03 2.55 1.66 2.24 -3.59 -4.65 -1.69 -4.45 -5.34 -8.06 -4.08 -1.5 -0.18 -1.36 -1.64 -0.98 -2.85 -1.42 -3.93 -2.25
-1.12 -1.3 -1.19 -1.1 -1.12 -1.65 -1.42 -0.9 -1.03 -0.61 -0.91 -0.98 2.35 2.64 0.93 2.34 -3.2 -3.58 -0.71 -3.7 -3.97 - -1.56 -0.37 0.04 1.64 -1.02 -1.28 -1.84 -1.69 -2.19 -2.81
-0.46 0.09 0.05 0.32 0.53 0.4 -0.47 -0.47 -0.26 -0.05 -0.26 -0.62 2.83 0.25 -1.73 1.65 -1.17 -1.62 -0.99 -5.79 - - -1.22 -0.53 0.98 -0.86 -0.61 -0.28 -0.5 -0.45 -1.45 -1.11
-1.67 -1.71 -2.51 -1.01 -1.05 -1.57 -2.02 -1.72 -1.84 -1.35 -1.53 -1.87 2.91 3.63 -0.0 2.47 -3.27 -3.48 -3.38 - -6.21 -4.02 -3.99 -3.0 -2.71 -3.86 -2.18 -1.81 -3.41 -2.98 -3.81 -3.52
-1.52 -0.03 -1.64 -1.14 -1.13 -1.02 -1.41 0.09 -1.5 -1.09 -0.26 -1.09 2.2 2.67 2.3 1.54 -1.86 -5.22 -2.22 -0.43 - 0.93 -3.13 -2.21 -0.41 -0.81 -1.81 -0.4 -2.1 -1.92 -2.55 -4.56
-0.13 0.04 0.06 0.16 0.05 0.11 -0.04 0.08 0.07 -0.11 -0.03 -0.3 1.42 1.29 0.43 0.85 -0.34 -0.6 -0.46 -1.41 -1.58 -3.65 0.08 0.14 -1.07 0.01 0.31 0.53 -0.54 -0.32 -1.1 -1.09
-0.89 -0.97 -1.45 -1.2 -0.74 -1.17 -2.28 -1.92 -1.86 -1.43 -1.2 -1.72 3.26 2.75 -0.99 1.43 -3.06 -3.89 0.27 -7.5 -1.31 -7.14 -0.77 0.55 -0.25 -0.96 -1.1 -1.33 -1.76 -1.38 -1.67 -0.49
-0.28 -0.21 -0.12 -0.43 -0.03 -0.8 -0.9 -0.44 -0.5 -0.22 -0.01 -0.49 2.09 2.05 -0.51 1.65 -0.81 -3.54 0.24 -3.7 -2.81 -2.71 -0.76 -0.85 0.67 0.93 -0.03 -0.42 -0.78 -0.73 -1.83 -2.07
-1.46 -1.57 -0.69 -1.21 -2.99 -2.24 -0.74 -1.19 -1.73 -0.66 -0.49 -1.12 2.38 2.13 1.74 2.24 -1.37 -1.25 -0.07 - -0.82 - -1.18 -0.93 0.51 -0.55 -1.16 -2.69 -0.37 -0.39 -0.22 -0.56
-0.15 -0.34 -0.46 -0.56 -0.43 -0.96 -0.87 -0.95 -0.4 -0.4 -0.43 -0.29 1.79 2.33 1.53 2.02 -0.74 -1.12 -0.14 - - - -1.11 -1.05 -4.84 0.42 -0.42 -0.47 -0.83 -0.57 -1.06 -0.71
-0.26 -0.36 -0.26 -0.03 -0.09 -0.01 0.03 0.14 0.28 0.23 0.06 -0.28 1.34 1.75 -0.28 0.73 -0.6 -0.15 -0.01 -0.4 -0.96 -3.31 0.17 0.08 -0.04 -1.34 -1.45 -1.54 -0.24 -0.17 -0.14 0.07
-0.24 -0.23 -0.02 0.06 0.17 0.03 -0.12 -0.04 0.0 -0.25 -0.19 -0.37 2.13 1.59 0.99 0.72 -0.84 -0.58 -0.39 -5.02 -1.93 -4.21 -0.42 -0.17 -1.25 -0.42 0.03 -0.2 -0.49 -0.37 -0.82 -0.67
-0.52 -0.96 -0.52 0.01 0.07 -0.19 -0.0 0.54 0.33 0.44 0.49 -0.17 1.61 1.7 -2.21 0.36 -1.62 -1.37 0.56 -9.28 -2.67 -8.15 -0.66 -0.36 -0.17 1.05 0.05 -0.61 -0.49 -0.65 0.38 -0.08
-0.18 -0.75 -0.68 -0.63 -0.64 -0.47 -1.11 -0.37 -0.6 -0.1 0.14 -0.26 2.1 2.22 -2.85 2.01 -3.5 -2.17 -2.06 - -4.24 -4.92 -0.25 1.52 0.21 -0.34 -0.15 -0.7 -1.24 -1.1 -0.7 -0.55
-2.51 -2.28 -2.0 -1.65 -1.35 -1.28 -2.37 -2.18 -2.08 -1.98 -2.03 -2.61 2.53 3.6 -2.12 2.93 -4.23 -2.74 -0.85 - - - -2.96 -1.63 -1.28 -4.36 -1.82 -1.22 -2.44 -1.38 -4.12 -2.16
-0.71 -1.13 -2.21 -2.09 -2.89 -1.45 -1.95 -1.16 -1.99 0.01 -0.09 -0.67 2.72 2.38 2.02 2.4 -2.38 -2.13 -1.27 - - - -2.34 -1.55 -2.59 -0.32 -0.97 -0.53 -1.07 -1.1 -0.81 -2.1
1.02 -0.43 -0.75 -0.44 0.22 -0.01 -1.31 -0.35 -0.45 -0.08 -0.15 0.0 2.64 2.04 -0.2 2.19 -2.55 -1.65 -0.08 - - - -2.33 -1.27 - -0.88 -1.95 -1.56 -1.1 -0.69 -0.86 -1.54
-0.45 -0.34 -0.23 -0.56 -0.16 -0.2 -0.18 -0.39 -0.18 -0.37 -0.14 -0.6 0.9 2.39 -3.32 1.32 -1.68 -0.57 -0.33 -5.01 -2.31 -3.5 0.21 1.31 0.14 -0.24 0.3 0.26 -1.07 -0.4 -0.95 -0.43
-1.11 -1.14 -0.91 -0.4 -0.89 -0.76 -0.76 -0.77 -0.93 -0.83 -0.74 -0.96 -0.04 2.2 0.17 2.48 -1.02 -0.21 0.41 -5.93 -3.35 -4.59 1.45 1.71 -0.7 -1.21 -1.66 -1.76 -0.47 -0.51 -1.09 -0.7
-0.88 -0.64 -0.5 -0.87 -0.98 -0.93 -0.86 -0.85 -0.81 -0.79 -0.44 -0.9 1.39 2.9 0.9 2.92 -1.25 -2.08 -0.73 -3.29 -3.35 -2.52 -2.44 -2.19 -0.56 -0.48 -1.23 -1.4 -1.5 -1.14 -2.07 -2.04
-1.51 -1.98 -1.6 -1.22 -1.94 -1.7 -1.62 -1.16 -1.32 -0.85 -0.9 -1.08 2.55 2.16 1.82 2.24 -2.65 -4.03 -1.26 -1.63 -4.48 -3.65 -2.16 -0.35 -0.62 0.66 0.05 0.13 -2.27 -1.53 -0.06 -0.35
0.06 -0.13 -0.33 0.01 -0.09 0.1 -0.1 -0.11 0.0 0.04 -0.02 -0.09 0.76 1.46 0.52 1.03 -0.6 -0.39 0.1 -1.76 -1.19 -1.7 -0.22 -0.16 0.31 -0.2 -0.07 -0.16 -0.43 -0.39 -0.27 -0.13
-0.39 -0.75 -0.4 -0.27 -0.19 -0.46 -0.75 -0.54 -0.45 -0.21 -0.44 -0.72 2.19 3.07 -1.23 2.26 -1.61 -1.68 -2.67 -2.2 -4.64 -2.57 -1.35 -1.72 -1.68 -1.0 -0.96 -0.82 -1.67 -1.31 -1.88 -1.87
-0.74 -0.31 -0.44 -0.2 -0.63 -0.73 -0.8 -1.04 -0.63 -0.61 -0.78 -0.84 1.97 2.35 1.62 2.38 -1.6 -1.82 -0.58 -5.96 -2.25 - -0.46 0.36 0.11 -0.68 -1.85 -1.45 -1.42 -1.28 -2.68 -2.98
-0.87 -0.47 -0.44 -0.33 -0.26 -0.27 -0.34 -0.58 -0.49 -0.44 -0.62 -0.95 2.81 2.48 -0.59 1.73 -0.74 -0.63 -0.86 -3.1 -2.83 -4.17 -0.46 -0.44 -0.46 -2.03 -1.75 -1.46 -0.75 -0.46 -2.32 -2.56
-0.57 -1.31 -1.42 -1.21 -1.46 -1.4 -1.45 -0.63 -0.64 0.03 -0.03 0.11 2.2 2.15 1.87 2.11 -1.39 -2.07 0.53 -10.01 -8.87 -8.65 -1.35 -0.82 -1.58 0.75 -0.86 -1.3 -1.38 -1.06 -1.27 -1.54
-5.09 -5.43 -6.01 -4.82 -4.97 -5.25 -6.75 -5.76 -4.92 -4.54 -4.85 -5.63 3.77 2.86 -1.11 3.15 -6.58 -8.52 -3.01 - - - -8.05 -2.58 -0.39 -8.1 -5.89 -6.98 -4.4 -2.41 -6.89 -3.2
-0.73 -0.44 -0.47 -0.22 -0.33 -0.23 -0.47 -0.71 -0.69 -0.81 -0.77 -0.88 1.68 2.42 1.06 1.87 -0.5 -0.54 -0.26 -3.51 -2.84 -3.94 0.35 0.32 -1.05 -1.17 -1.09 -0.99 -0.35 -0.25 -1.06 -1.24
-1.97 -2.75 -2.68 -1.16 -2.41 -1.56 -1.75 -1.77 -2.19 -1.33 -1.77 -2.06 2.36 3.33 0.29 3.5 -5.19 -6.01 -4.43 - -6.27 - -4.71 -2.75 -4.94 -3.72 -3.99 -3.56 -2.79 -2.5 -4.13 -3.8
0.55 0.02 -0.09 -0.1 0.37 0.19 -0.14 -0.06 -0.02 0.07 0.2 -0.21 1.8 1.83 -0.8 1.36 -0.81 0.27 -1.66 -6.0 -3.13 -7.45 0.8 0.42 -5.28 -2.05 -0.89 -0.44 -0.68 -0.5 -1.04 -1.05
-1.52 -1.67 -1.14 -0.21 -0.84 -1.05 -1.18 -1.15 -1.39 -0.42 -1.9 -1.02 2.74 3.61 -0.38 2.1 -1.81 -3.48 -2.89 -5.13 -6.27 - -2.2 -2.26 - -3.14 -2.33 -2.48 -2.24 -2.17 -2.83 -2.56
-0.54 -0.81 -0.31 -0.33 -0.38 -0.81 -0.05 0.01 -0.02 0.04 0.19 -0.06 2.16 2.1 -0.6 0.55 -1.16 -0.14 0.24 -6.77 -3.62 - -1.07 -0.43 -1.17 0.98 0.27 -0.14 -0.81 -0.81 -0.63 -0.54
-0.17 0.11 0.31 0.23 0.29 0.17 0.29 -0.07 0.15 0.09 0.03 -0.35 2.24 1.97 -2.59 1.56 -2.92 -2.42 -1.79 -2.95 -2.51 -3.98 -0.97 0.19 0.24 -1.22 -0.19 0.11 -2.25 -1.43 -1.96 -1.68
-0.05 -0.49 -0.48 -0.46 -0.21 -0.21 -0.48 -0.31 -0.12 -0.09 -0.02 -0.13 1.86 1.78 0.22 0.95 -1.02 -1.3 0.25 -5.1 -1.9 -4.95 -0.07 0.31 -0.12 0.51 0.03 0.11 -0.5 -0.24 -0.97 -0.76
-0.24 -0.59 -0.85 -0.6 -0.5 -0.24 -0.3 0.23 0.05 0.2 0.16 -0.32 0.86 2.1 -0.64 1.35 -1.31 -0.51 0.59 -4.89 -3.5 - -0.63 -0.2 -0.24 0.39 0.01 -0.33 0.18 -0.13 0.16 -0.03
-0.28 -0.17 -0.09 -0.11 -0.03 -0.36 -0.21 -0.22 -0.13 0.23 0.37 0.57 1.33 1.52 0.78 1.18 -1.09 -1.63 0.28 -1.75 -0.9 -2.49 -0.81 -0.53 -0.01 0.1 -0.15 -0.22 -0.67 -0.53 -1.0 -0.34
0.04 -0.93 -2.17 -1.38 -2.85 -0.86 -1.55 -1.39 -1.05 -0.19 -0.8 -0.91 2.91 2.77 -0.27 2.36 -2.46 -3.38 -3.1 -1.41 0.49 - -3.27 -1.72 -0.6 -0.31 -1.2 -1.61 -1.48 -1.94 -3.83 -2.51
-0.01 -0.34 -0.33 -0.26 -0.59 -0.41 0.11 -0.05 -0.07 0.08 0.07 0.07 1.59 2.08 -0.14 1.47 -0.01 -0.47 0.49 -8.94 -4.2 -5.43 -0.14 -0.16 -0.98 -0.36 -0.72 -0.75 -0.54 -0.57 -0.55 -0.9
-0.35 -0.6 -0.47 -0.26 -0.54 -0.34 -0.68 -0.3 -0.29 0.25 0.17 -0.24 2.63 2.01 1.31 1.89 -1.21 -2.56 -2.45 -2.84 -5.08 -2.01 -1.7 -0.37 -1.69 0.13 -1.08 -1.44 -1.43 -1.68 -2.3 -1.67
-0.74 -0.82 -0.9 -0.65 -0.52 -0.78 -1.18 -0.76 -0.71 -0.53 -1.18 -0.92 1.69 3.48 -0.94 2.31 -1.58 -1.68 -1.62 -7.05 -5.15 -2.1 -1.2 -1.14 -1.25 -0.94 -1.88 -1.41 -1.21 -1.03 -1.86 -1.63
-2.22 -3.95 -3.09 -0.49 -3.01 -2.01 -0.78 -3.21 -1.57 -2.74 -4.1 -1.91 1.65 3.07 -1.53 3.91 -5.4 - 0.32 - - - - -3.26 - - -4.17 -3.15 -2.19 -2.5 -3.19 -5.58
-1.73 -0.45 -0.57 -0.13 -0.89 -0.44 -0.89 -1.0 -0.27 -0.69 -1.22 -1.69 2.73 1.84 1.44 2.5 -0.41 -0.82 -0.75 - - - -1.05 -1.24 -3.02 -1.28 -1.45 -0.52 -1.0 -0.9 -1.23 -1.2
-0.81 -1.33 -0.94 -1.25 -0.62 -0.99 -0.75 0.19 -0.87 -1.17 -0.78 -1.99 2.07 2.62 0.56 1.64 -2.59 -1.57 -1.73 -0.67 -1.1 -3.97 -1.57 -1.42 1.2 0.57 0.51 0.6 -1.77 -1.3 -2.1 -2.92
-1.32 -1.23 -0.58 -0.53 -0.05 -0.41 0.4 -0.02 0.35 0.02 -0.05 -0.99 2.55 2.51 1.47 0.51 -1.38 -0.96 -1.3 -6.35 -6.14 -11.46 -1.37 -0.5 -0.65 -1.02 -0.99 -1.11 -1.62 -0.79 -1.5 -1.06
-1.16 -2.78 -3.14 -1.55 -2.31 -2.01 -1.66 -1.25 -2.12 -0.47 -0.96 -1.5 2.8 3.28 1.58 2.76 -6.99 -3.64 -4.14 -6.24 - - -5.01 -2.59 -2.2 -2.24 -1.84 - -3.78 -2.73 -5.05 -2.47
-0.69 -0.43 -0.56 -0.2 -0.07 -0.14 -0.79 -0.53 -0.71 -0.61 -0.48 -0.77 2.44 2.49 1.16 1.75 -1.7 -2.33 -0.65 -6.24 -3.2 - -0.66 0.24 -0.16 -1.03 -1.04 -0.59 -1.68 -1.23 -2.65 -2.32
-2.78 -3.5 -3.34 -2.73 -1.49 -2.64 -3.14 -3.04 -3.43 -2.45 -2.12 -3.15 3.76 2.64 1.47 2.22 -2.65 -3.25 -2.06 -1.36 - -2.59 -2.92 -1.94 -2.14 -3.44 -3.24 -3.14 -2.51 -1.65 -2.42 -2.2
-1.18 -1.64 -1.63 -1.4 -0.96 -1.39 -1.51 -1.15 -0.95 -1.12 -1.05 -1.3 2.94 3.27 -2.44 1.36 -2.32 -2.64 -1.31 -3.49 -0.57 -1.98 -1.91 -1.01 -0.13 -0.17 -0.39 -0.82 -1.94 -1.38 -1.98 -1.6
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.