- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.22 | -0.35 | -0.46 | -0.11 | 0.2 | 0.11 | 0.27 | -0.1 | 0.2 | 0.41 | 0.5 | 0.06 | 0.02 | 0.36 | 1.1 | -0.06 | -0.85 | -0.44 | -0.6 | -0.23 | -1.09 | 0.75 | -0.42 | 0.25 | -1.69 | 0.17 | 0.52 | 0.12 | -1.02 | -0.98 | 0.06 | -0.27 | |
| -0.39 | -0.17 | 0.08 | 0.04 | 0.22 | -0.02 | 0.15 | 0.05 | 0.24 | 0.32 | 0.22 | -0.17 | -0.16 | -0.18 | 0.78 | 0.37 | 0.2 | -0.04 | 0.19 | -1.33 | -1.22 | 0.44 | 0.04 | 0.22 | -2.92 | 0.14 | 0.41 | 0.18 | -0.41 | -0.39 | -0.08 | -0.13 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.