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Heatmap: Cluster_109 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
2.47 2.15 3.4 2.93 3.25 3.24 2.73 3.32 2.14 2.98 2.72 2.06 4.0 2.41 6.22 3.61 2.13 2.2 3.86 6.08 1.05 7.11 2.0 2.66 0.54 1.01 1.08 1.08 2.43 3.16 2.09 2.97
8.43 6.98 7.21 6.26 8.1 8.55 9.12 8.76 9.17 7.18 6.3 6.69 3.51 3.25 6.81 3.46 4.01 2.55 4.46 6.65 4.2 10.19 4.05 4.1 5.85 4.39 4.89 3.95 4.29 4.73 3.45 3.6
6.29 8.98 8.73 8.62 6.58 7.42 7.06 6.24 7.31 7.42 7.9 7.76 2.62 4.45 12.91 3.72 3.85 4.44 1.36 5.79 7.79 3.71 3.12 3.78 0.69 6.07 5.65 6.49 2.74 3.64 6.14 4.51
18.43 21.26 15.49 19.11 21.03 22.75 23.9 23.51 22.95 25.16 22.93 20.53 19.0 14.65 23.64 18.96 14.82 16.81 24.53 12.46 4.12 8.79 16.95 19.01 16.54 28.52 19.69 21.21 21.24 19.93 18.59 18.85
17.81 15.96 16.91 17.08 14.68 18.65 19.2 22.48 22.27 23.4 19.75 17.33 9.75 10.38 24.07 10.93 10.33 8.22 13.44 8.19 6.86 10.93 9.46 9.95 20.46 18.73 15.45 16.64 14.01 15.74 12.46 12.5
13.42 16.19 16.23 19.79 17.54 19.41 21.2 19.55 19.12 17.98 17.37 15.95 8.18 9.16 16.53 7.72 12.88 9.26 10.87 19.6 6.56 5.52 10.08 8.75 7.85 12.34 14.95 17.67 12.11 12.75 7.18 7.18
7.45 7.59 7.31 8.4 6.34 8.47 8.57 8.56 9.41 10.78 9.14 7.81 5.45 4.35 9.08 6.76 4.07 3.1 6.53 4.09 0.0 0.18 4.63 4.47 0.62 4.3 6.21 5.93 5.85 6.25 6.16 6.64
22.71 20.85 19.08 20.48 23.13 21.43 20.64 20.53 22.44 22.43 20.54 20.89 15.22 14.01 19.12 16.89 10.72 10.89 15.55 10.21 1.28 1.65 11.25 11.5 6.7 17.66 17.55 18.05 12.76 12.6 13.67 11.51
200.6 240.75 335.14 347.63 454.74 426.66 500.39 318.52 359.28 303.61 296.55 199.86 136.6 165.03 514.4 145.65 192.55 257.95 101.92 165.5 19.41 122.37 193.71 275.12 18.33 97.39 130.29 167.01 196.07 278.59 165.3 188.14
76.17 108.5 142.38 145.14 170.84 176.92 196.52 120.6 142.18 113.98 103.91 72.26 59.36 88.91 326.74 68.78 84.27 117.7 25.41 44.04 6.27 65.97 52.21 64.29 9.33 55.23 70.47 86.63 65.9 86.67 42.47 37.55
35.27 47.07 45.11 43.13 38.52 34.56 61.32 50.63 58.8 69.32 55.82 51.13 26.12 51.76 41.74 31.25 46.24 54.55 71.04 5.12 10.47 11.05 20.82 39.24 6.48 44.59 12.39 12.31 25.83 44.16 22.05 17.0
3.14 5.42 6.79 6.45 7.93 6.89 6.61 5.05 4.74 4.71 4.58 3.53 3.21 2.35 10.15 1.78 2.81 1.63 3.01 1.16 2.23 3.5 5.23 6.04 3.18 3.8 6.29 6.14 1.38 1.54 3.06 4.78
19.05 17.2 22.29 20.7 18.3 18.97 22.57 19.48 22.63 23.85 25.71 20.51 14.05 10.94 16.04 10.43 23.9 14.54 13.84 30.91 3.78 14.19 10.24 11.78 3.54 12.32 9.48 10.71 18.03 21.16 20.61 17.77
10.85 12.08 12.0 10.8 9.41 10.97 11.84 9.03 9.76 12.76 12.83 11.16 4.5 8.8 11.12 6.35 6.27 3.33 6.57 14.02 1.22 7.06 6.29 4.9 3.45 8.49 3.91 7.28 6.21 6.29 4.97 6.02
4.5 8.85 8.49 6.88 7.62 7.38 8.6 5.89 8.03 9.32 9.27 7.13 3.19 2.84 4.91 4.28 5.66 6.95 7.05 6.88 2.5 3.12 6.34 6.88 0.14 5.68 3.12 3.73 2.74 3.95 2.67 2.06
25.21 33.22 41.8 51.51 52.84 49.52 62.34 48.33 52.53 44.64 41.86 33.37 22.9 69.72 125.77 43.29 45.22 36.35 38.42 27.35 9.87 20.79 25.3 26.22 11.93 40.86 45.33 52.34 36.32 48.56 36.6 45.34
25.31 24.93 23.04 23.9 27.42 26.15 24.77 26.13 28.55 29.37 23.5 22.38 21.65 24.47 23.45 19.26 13.77 14.32 24.18 21.45 11.65 17.19 14.74 15.95 25.34 18.02 24.03 24.68 16.44 17.69 21.22 13.75
1.38 1.66 1.12 1.2 1.54 1.24 1.77 0.9 1.33 0.78 0.91 1.1 0.84 1.45 1.51 0.81 0.27 0.37 0.72 0.0 0.0 0.0 0.64 0.6 0.07 0.86 0.76 0.68 0.37 0.33 0.2 0.12
9.35 10.63 11.24 12.64 9.7 11.91 10.24 14.25 10.79 10.8 12.97 11.76 4.31 8.38 8.68 4.68 3.55 1.63 6.29 13.85 2.73 3.39 4.88 6.01 6.84 7.23 7.04 6.52 3.59 3.3 3.93 3.16
13.44 14.39 14.5 15.55 14.03 17.18 18.15 15.62 17.61 19.8 17.58 16.69 10.71 8.54 14.1 11.4 8.82 6.71 10.74 13.25 9.28 7.76 8.26 7.86 8.21 9.67 11.57 9.98 9.92 11.21 12.59 11.57
2.55 2.63 2.97 2.72 1.6 2.34 2.34 2.97 2.79 2.47 3.6 3.37 0.26 0.78 0.18 0.41 2.14 2.86 0.46 3.95 0.71 0.0 1.25 0.34 0.56 0.77 1.56 0.81 1.52 1.0 1.89 1.25
7.3 9.61 13.35 13.7 16.16 15.49 16.43 13.42 18.95 14.49 14.89 9.66 0.82 3.58 16.33 1.95 7.72 8.53 5.26 9.71 0.73 3.76 4.49 3.87 1.13 4.37 3.36 4.91 5.65 7.09 5.57 8.2
4.61 5.32 7.51 6.91 5.31 6.4 8.13 4.24 8.95 8.15 8.12 7.66 3.09 3.06 5.63 3.76 3.35 4.75 1.75 5.46 0.16 3.57 10.26 13.56 0.41 1.22 0.65 1.6 3.9 3.72 3.1 2.6
17.02 16.23 15.85 16.02 15.83 17.21 16.34 16.02 18.86 20.01 19.11 16.25 14.48 13.96 19.55 15.29 9.82 9.43 13.15 25.58 11.62 19.15 12.07 11.93 5.76 11.2 11.77 8.97 11.03 10.7 13.98 16.6
4.56 4.44 4.43 4.86 5.77 5.37 5.55 4.85 6.01 5.01 5.17 5.08 2.11 3.16 6.22 3.7 1.99 0.68 3.08 6.28 1.61 6.47 2.42 2.67 2.56 2.44 3.9 3.32 1.83 2.27 2.09 2.32
13.86 20.6 27.21 26.67 23.06 24.19 18.31 15.62 17.12 16.68 15.82 13.87 16.89 12.82 38.45 20.17 17.6 9.74 13.19 27.99 6.12 12.05 22.67 19.11 4.83 16.67 20.27 24.52 11.99 15.14 6.07 6.44
11.25 18.76 18.39 19.46 24.35 18.93 18.32 13.59 15.66 15.54 17.83 12.02 8.67 4.76 26.01 9.09 10.94 3.93 12.66 8.77 6.38 19.63 10.48 9.26 0.84 14.61 7.33 9.47 5.16 7.23 5.78 3.32
11.4 17.17 26.22 20.47 21.25 21.0 16.39 14.26 16.06 12.95 12.82 11.78 13.7 6.3 29.14 12.94 12.9 8.56 16.93 10.34 5.18 13.5 11.25 8.87 0.78 14.61 13.18 12.88 6.16 7.47 6.12 4.04
0.31 0.31 0.54 0.51 0.42 0.41 0.61 0.56 0.37 0.75 0.7 0.53 0.08 0.33 1.29 0.07 0.19 0.31 0.18 0.37 0.26 0.11 0.09 0.12 0.1 0.47 0.69 1.1 0.05 0.14 0.04 0.07
26.7 29.04 38.18 42.1 36.02 38.9 46.4 29.33 41.18 33.32 33.78 30.08 19.02 49.27 49.62 32.07 35.8 24.15 11.74 35.25 20.55 31.51 24.11 23.34 18.3 9.68 24.42 32.69 23.17 27.31 23.88 24.05
3.86 3.76 3.82 3.8 6.89 4.4 5.13 4.63 6.14 5.06 5.53 4.33 1.44 2.07 6.2 1.13 1.98 0.38 1.22 2.41 2.15 2.99 0.74 0.95 0.7 2.48 1.48 1.97 1.61 1.93 1.75 1.4
22.62 42.26 58.8 61.89 64.88 66.77 68.3 42.53 38.34 36.48 33.71 26.12 14.74 26.86 108.86 26.65 43.47 26.91 16.43 13.09 8.11 24.64 22.66 19.97 1.54 57.47 37.0 47.49 19.42 20.37 17.99 13.83
0.42 0.42 0.76 0.78 1.04 1.22 0.95 0.86 0.75 0.73 0.46 0.32 0.35 0.71 1.63 0.68 0.3 0.48 0.4 1.27 0.12 0.64 0.27 0.34 0.31 0.7 0.77 0.62 0.43 0.48 0.13 0.16
2.47 3.45 3.57 4.09 4.62 4.63 3.25 2.95 2.63 3.46 1.99 2.47 2.41 3.0 4.49 1.49 1.1 1.03 0.96 0.07 0.29 0.67 2.47 3.07 0.69 1.32 2.87 2.75 0.74 0.75 1.85 2.73
18.68 23.49 34.05 30.69 34.39 31.22 36.94 30.23 33.47 33.47 30.79 22.82 6.23 8.85 27.64 10.43 32.58 38.03 8.57 21.41 6.05 36.09 21.43 13.33 2.54 12.33 8.5 13.24 21.09 25.89 20.56 19.1
7.66 9.81 12.17 13.1 14.14 12.44 9.56 7.73 10.07 7.79 8.01 7.52 3.69 5.09 17.66 5.15 13.34 12.12 6.08 14.85 10.23 1.47 6.7 3.53 3.44 5.1 8.75 10.6 4.12 4.04 5.54 5.62
2.1 1.39 2.0 2.49 0.9 1.11 2.68 1.82 3.2 1.59 2.37 2.81 0.26 0.78 1.48 0.23 0.69 2.92 0.68 2.13 0.0 0.0 0.53 0.43 0.67 2.46 1.69 0.87 0.52 0.81 0.35 0.4
8.82 10.73 10.73 13.34 11.44 11.05 7.51 6.61 12.18 10.97 12.71 11.22 1.01 4.23 12.93 4.31 2.79 1.09 2.83 4.21 0.03 2.45 0.93 0.93 2.64 3.56 3.59 5.25 2.94 4.76 3.49 3.53
11.85 13.5 10.93 12.68 12.6 12.53 14.41 13.66 13.23 14.97 12.6 13.84 0.96 9.72 8.46 2.27 7.19 9.13 12.05 11.45 3.04 3.1 8.24 5.01 11.46 12.49 16.94 17.75 6.55 6.48 4.35 4.94
6.55 8.59 5.98 7.27 11.73 7.76 7.22 6.48 10.44 6.22 6.42 6.32 4.33 5.02 7.0 5.05 2.75 0.69 4.36 0.74 2.74 5.51 3.86 4.78 1.87 4.02 3.75 4.36 2.62 3.12 2.7 3.11
55.69 49.87 51.8 51.37 55.24 60.77 52.84 53.47 54.16 61.08 57.34 52.21 63.35 56.14 93.34 67.83 38.82 45.97 58.46 113.74 45.38 90.6 49.58 57.29 19.97 39.49 23.83 24.37 41.91 47.77 43.62 47.68
24.08 22.38 20.49 21.96 28.63 29.37 31.54 30.81 27.76 32.26 26.37 25.18 18.68 14.91 33.13 18.17 17.81 16.02 19.49 16.02 9.83 6.75 20.26 20.01 14.3 22.79 28.24 27.93 18.36 22.36 16.16 20.16
15.15 14.38 15.2 17.49 19.77 19.74 23.5 22.87 23.07 23.07 20.29 19.07 12.68 13.87 28.8 10.67 10.06 11.76 14.8 21.6 12.68 11.85 10.49 11.32 20.04 21.82 22.7 21.33 10.08 11.42 15.8 16.72
39.6 37.46 38.94 36.42 41.42 42.03 40.73 38.6 33.98 34.84 34.07 31.48 28.73 28.38 44.41 33.92 22.81 24.18 33.38 61.34 24.92 44.34 24.85 27.2 35.82 30.05 35.28 37.6 22.39 24.18 27.21 25.54
19.05 25.97 30.56 31.13 35.07 33.85 31.85 27.07 27.84 23.34 23.04 18.66 15.06 21.49 49.13 20.89 27.83 20.23 9.98 31.98 9.43 84.75 21.29 19.26 2.65 15.11 16.71 25.33 15.99 16.9 7.83 7.26
2.65 2.88 3.88 3.64 6.99 6.44 5.55 6.33 5.51 3.4 3.03 3.2 2.45 1.43 12.17 3.45 2.79 3.87 2.14 1.53 4.17 24.51 2.08 2.44 2.66 3.92 7.22 6.02 2.24 2.59 1.1 1.23
7.97 7.99 8.87 8.6 9.51 9.63 9.23 10.08 9.4 10.58 8.9 8.83 9.99 6.71 15.23 9.75 5.36 2.97 6.88 7.44 4.26 8.46 7.23 9.17 4.54 6.41 6.87 7.61 6.41 7.8 5.74 5.79
3.24 3.27 4.51 6.26 6.3 7.78 7.18 3.21 4.27 4.03 3.96 3.1 3.57 4.2 16.74 3.74 4.79 3.74 2.64 1.81 1.63 2.75 0.69 0.58 0.32 2.62 3.62 4.59 2.04 2.81 2.1 2.39
6.57 8.7 7.81 7.41 10.2 8.96 7.41 6.15 7.87 8.47 8.16 7.44 2.26 3.0 11.08 2.98 3.88 2.23 1.06 8.41 2.26 4.94 2.76 3.15 0.49 3.99 3.17 4.13 2.59 3.08 4.61 3.66
57.3 58.01 56.88 53.82 49.64 54.67 47.95 45.11 57.17 64.63 60.39 53.61 26.54 30.76 60.18 31.84 26.65 22.56 27.49 65.28 28.25 35.74 33.84 39.6 25.39 29.36 23.96 26.84 26.88 29.9 22.5 22.84
40.9 40.6 40.46 41.19 45.98 44.25 41.67 42.25 41.72 48.79 41.02 41.89 27.19 34.8 41.73 27.99 21.57 13.89 27.79 31.11 35.68 34.22 23.56 20.81 48.07 25.66 27.56 27.05 22.74 25.8 14.54 14.87
3.9 8.55 10.66 11.7 12.97 13.56 12.32 6.81 9.88 5.57 6.13 5.25 3.75 3.71 10.24 4.21 7.54 3.51 4.98 1.76 0.87 16.95 5.59 5.23 6.51 2.48 4.18 4.98 4.23 6.86 4.17 2.22
9.21 8.8 8.44 8.79 13.15 13.13 14.18 14.96 14.12 14.67 12.35 10.64 7.94 6.12 10.47 9.94 8.5 6.31 11.57 6.16 0.58 0.08 10.21 8.82 3.25 16.9 14.72 16.7 10.42 11.37 8.94 9.44
9.92 10.26 11.3 12.79 12.11 13.05 12.72 11.6 11.65 11.21 9.78 8.78 5.67 6.25 15.2 7.52 9.39 5.0 6.24 14.72 4.78 20.92 7.08 7.74 4.45 6.34 9.67 9.12 6.37 7.31 4.62 5.1
20.13 19.37 22.71 20.45 20.0 22.48 20.74 21.06 24.06 23.6 23.5 18.51 27.99 18.02 19.19 25.83 15.31 12.81 16.46 39.81 20.97 28.11 16.62 17.27 12.72 12.42 12.76 12.81 14.49 13.99 14.5 15.85
7.75 9.26 9.39 10.61 12.5 12.49 10.44 7.35 7.79 6.9 7.24 5.37 10.02 3.51 14.39 9.78 11.06 6.16 6.96 6.17 10.75 22.43 4.91 4.8 5.91 5.33 10.16 10.6 7.04 8.33 3.54 4.22
22.53 31.83 31.12 38.61 37.1 43.14 32.22 28.39 33.78 28.33 25.25 21.26 5.2 9.78 37.39 13.1 38.23 23.23 10.84 35.28 6.31 29.06 12.56 4.39 5.02 17.33 23.84 30.03 22.84 28.58 20.1 12.82
17.4 15.3 16.96 16.85 15.11 18.86 19.28 18.77 22.06 19.65 19.61 15.96 7.57 8.77 15.25 7.48 9.47 4.88 9.92 11.36 4.56 6.02 7.6 9.25 12.14 10.37 14.2 13.7 9.01 10.15 13.09 13.3
11.88 15.01 17.05 23.14 23.09 27.46 28.64 21.85 23.75 19.6 17.11 14.56 11.68 13.51 40.05 12.68 14.2 21.07 20.65 11.17 1.81 19.14 14.16 14.69 10.45 13.23 19.11 20.43 14.26 16.14 9.1 9.14
13.89 12.41 12.06 13.3 18.01 13.49 16.51 16.07 19.46 17.08 17.97 16.04 7.48 2.33 17.06 7.79 8.55 7.38 10.39 11.28 4.11 0.66 5.7 7.41 13.63 9.48 13.78 9.56 8.33 11.21 16.49 21.62
13.69 14.32 12.81 11.57 16.58 12.86 11.68 14.19 15.22 14.06 12.2 12.53 9.58 9.25 12.29 11.43 6.36 5.8 13.9 6.08 2.02 2.22 8.2 7.68 6.62 9.8 8.21 7.57 7.68 8.65 6.81 7.28
27.31 30.51 36.06 38.88 45.05 43.06 42.79 33.37 35.32 27.96 27.05 26.98 21.47 27.31 34.33 19.82 26.31 15.4 19.1 32.47 18.55 39.8 20.27 16.94 17.78 18.52 29.69 29.6 20.01 20.72 20.2 20.81
9.84 10.26 10.25 10.09 11.89 12.86 13.19 12.01 12.19 13.37 11.2 9.3 5.23 5.75 7.69 9.2 6.67 6.1 7.48 8.76 0.52 3.59 6.29 5.46 1.06 6.25 8.77 8.55 7.2 8.53 7.65 8.19
8.8 8.4 14.68 20.91 24.84 30.42 33.21 30.12 29.84 19.19 17.92 13.01 2.79 2.91 27.17 2.81 19.81 7.18 5.15 25.17 7.47 21.81 3.61 2.3 7.02 4.7 27.83 34.91 15.97 15.0 6.68 3.82

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)