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Heatmap: Cluster_223 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00186030 (evm_27.TU.AmTr_v1.0_scaffold00001.182)
 0.0 0.0 0.0 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.25 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.99
AMTR_s00001p00260900 (evm_27.TU.AmTr_v1.0_scaffold00001.377)
 0.0 4.8 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.05 3.91 1.72 0.49 0.61 0.62 1.16 1.99 1.5 0.76 1.27 1.35 1.19
0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00002p00271800 (evm_27.TU.AmTr_v1.0_scaffold00002.638)
 0.0 0.0 0.0 0.0 2.14 0.0 0.07 0.0 0.13 0.25 1.61 0.96 0.47 0.37 1.72 0.0 0.22 0.84 0.0 0.43 0.75 0.18
AMTR_s00003p00168330 (evm_27.TU.AmTr_v1.0_scaffold00003.144)
 20.11 59.75 68.06 0.88 26.41 20.37 29.02 23.61 30.1 36.09 22.31 20.63 12.22 16.71 15.41 14.36 28.02 21.1 21.28 45.13 15.72 18.48
AMTR_s00003p00240060 (evm_27.TU.AmTr_v1.0_scaffold00003.250)
 0.0 0.0 0.0 0.0 0.12 0.0 0.39 1.79 0.82 1.05 1.42 0.45 0.69 1.34 2.44 1.84 1.67 2.78 1.14 1.46 0.0 0.72
AMTR_s00007p00045020 (evm_27.TU.AmTr_v1.0_scaffold00007.21)
 1.41 1.28 0.11 0.0 0.96 0.0 0.0 0.0 0.12 0.1 1.72 1.49 0.4 0.95 1.16 0.0 0.0 0.0 1.75 3.3 0.0 0.23
AMTR_s00007p00268090 (evm_27.TU.AmTr_v1.0_scaffold00007.387)
 0.0 0.0 0.0 0.0 1.73 0.0 3.73 0.0 3.23 3.31 4.81 0.0 2.0 2.41 1.5 0.0 4.51 0.0 0.66 2.07 0.53 3.22
AMTR_s00008p00197690 (evm_27.TU.AmTr_v1.0_scaffold00008.114)
 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.05 0.04 0.12 0.0 0.0 0.0 0.0 0.28 0.09 0.0 0.0 0.0 0.0 0.0
AMTR_s00009p00266500 (evm_27.TU.AmTr_v1.0_scaffold00009.395)
 22.04 31.8 45.04 0.0 4.25 0.0 10.12 30.0 25.73 23.4 8.55 11.03 17.12 13.43 4.97 0.37 13.36 0.97 4.54 13.96 3.9 20.72
AMTR_s00012p00263770 (evm_27.TU.AmTr_v1.0_scaffold00012.347)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.87 0.0 0.0 0.0 0.0 0.0 5.96 0.0 0.0 0.0 0.0 2.71
AMTR_s00014p00195430 (evm_27.TU.AmTr_v1.0_scaffold00014.68)
 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00017p00219070 (evm_27.TU.AmTr_v1.0_scaffold00017.165)
 0.0 0.0 0.0 0.0 0.21 0.0 0.0 0.0 0.0 0.0 0.25 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.02
AMTR_s00019p00218240 (evm_27.TU.AmTr_v1.0_scaffold00019.269)
 0.25 11.63 44.58 1.17 4.39 7.06 6.63 2.47 14.25 10.66 30.71 30.2 31.73 27.57 17.14 13.4 16.67 21.57 23.58 22.41 9.46 36.96
AMTR_s00020p00091620 (evm_27.TU.AmTr_v1.0_scaffold00020.33)
 4.33 0.93 8.89 2.2 14.11 0.18 0.67 1.73 0.57 0.23 15.21 10.87 4.8 4.74 12.94 11.97 12.52 1.7 5.26 3.95 2.25 2.27
AMTR_s00020p00091800 (evm_27.TU.AmTr_v1.0_scaffold00020.34)
 0.0 0.0 0.0 6.16 18.05 0.0 1.01 0.06 0.64 0.43 15.44 15.77 9.49 6.01 15.0 13.21 5.86 3.29 6.22 3.72 0.89 2.02
AMTR_s00021p00102700 (evm_27.TU.AmTr_v1.0_scaffold00021.50)
 0.0 11.19 0.0 0.0 1.05 0.0 0.47 0.0 0.72 0.52 1.88 5.33 2.43 2.08 5.25 0.0 2.5 0.93 1.72 11.32 0.0 4.6
AMTR_s00021p00249790 (evm_27.TU.AmTr_v1.0_scaffold00021.281)
 0.0 0.0 0.0 0.0 1.06 0.0 0.42 0.0 0.79 0.81 1.84 0.0 2.51 2.72 1.98 0.0 1.69 0.0 1.89 5.17 3.35 1.48
AMTR_s00022p00191580 (evm_27.TU.AmTr_v1.0_scaffold00022.211)
 0.0 0.0 0.0 0.0 0.83 0.0 0.02 0.0 0.01 0.06 0.43 0.0 0.36 0.21 0.9 0.17 0.35 0.0 0.23 0.6 0.4 0.11
AMTR_s00024p00036860 (evm_27.TU.AmTr_v1.0_scaffold00024.12)
 0.0 0.0 0.0 0.04 0.44 0.0 0.0 0.0 0.02 0.09 0.47 0.0 0.09 0.07 0.0 0.0 0.25 0.0 0.0 0.16 0.0 0.0
AMTR_s00024p00127570 (evm_27.TU.AmTr_v1.0_scaffold00024.75)
 0.0 0.0 0.0 0.0 0.91 0.0 0.45 0.0 2.45 4.26 5.29 6.09 2.24 1.24 0.52 0.0 2.34 1.14 2.37 7.96 4.44 0.19
AMTR_s00024p00127950 (evm_27.TU.AmTr_v1.0_scaffold00024.76)
 0.0 0.0 0.0 0.0 1.57 0.0 0.57 0.0 2.78 6.57 6.34 12.17 4.44 2.04 0.83 0.0 2.57 2.63 4.2 11.03 5.29 0.36
AMTR_s00028p00150530 (evm_27.TU.AmTr_v1.0_scaffold00028.55)
 0.0 0.0 0.0 0.0 0.23 0.0 0.0 0.0 0.0 0.0 5.52 0.0 0.22 0.18 0.3 0.0 4.26 0.0 0.0 1.26 7.36 0.0
AMTR_s00028p00150640 (evm_27.TU.AmTr_v1.0_scaffold00028.56)
 0.0 0.0 0.0 0.0 0.3 0.0 0.0 0.0 0.0 0.0 1.97 0.0 0.39 0.0 0.0 0.0 0.0 0.0 0.0 0.5 0.0 0.0
AMTR_s00028p00205610 (evm_27.TU.AmTr_v1.0_scaffold00028.95)
 0.0 0.0 0.22 0.0 0.1 0.0 0.07 0.56 0.2 0.19 0.46 0.18 0.26 0.05 0.08 0.0 0.05 0.0 0.0 0.03 0.0 0.07
AMTR_s00032p00043190 (evm_27.TU.AmTr_v1.0_scaffold00032.21)
 26.57 18.25 32.78 1.06 10.95 0.21 8.46 0.0 9.57 9.04 32.91 20.05 28.91 32.24 13.68 8.02 35.69 9.07 11.61 25.55 9.96 20.53
AMTR_s00033p00141810 (evm_27.TU.AmTr_v1.0_scaffold00033.81)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 5.9 0.0 3.58 1.41 0.55 0.0 1.16 0.0 6.01 1.96 4.02 1.35
AMTR_s00041p00201900 (evm_27.TU.AmTr_v1.0_scaffold00041.184)
 0.0 0.0 0.0 2.98 0.05 0.0 0.0 0.0 0.0 0.0 6.46 1.45 0.76 0.05 0.11 0.0 2.45 0.32 0.16 0.22 0.0 6.61
AMTR_s00046p00217610 (evm_27.TU.AmTr_v1.0_scaffold00046.149)
 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.08 0.0 0.0 0.59 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.16
AMTR_s00053p00209900 (evm_27.TU.AmTr_v1.0_scaffold00053.160)
 0.0 0.0 8.51 3.4 5.9 0.0 5.76 0.0 3.51 4.45 18.01 0.0 11.83 10.17 9.01 8.57 20.15 5.54 5.29 9.9 4.98 14.38
AMTR_s00053p00215970 (evm_27.TU.AmTr_v1.0_scaffold00053.167)
 1.55 6.42 10.28 0.28 0.35 0.31 0.61 0.0 1.14 0.7 5.18 5.12 5.89 5.99 2.09 3.66 5.09 1.92 3.41 6.6 4.6 5.97
0.0 0.0 0.0 2.24 0.87 0.91 0.08 8.3 0.0 0.04 0.97 1.09 1.19 0.12 0.29 2.22 7.49 1.91 1.4 7.76 0.86 1.74
AMTR_s00063p00207510 (evm_27.TU.AmTr_v1.0_scaffold00063.83)
 6.06 39.11 3.79 0.0 14.05 0.0 0.62 0.0 0.0 0.11 52.16 28.89 8.31 3.55 4.87 5.58 7.93 3.61 1.83 5.45 0.0 41.4
AMTR_s00063p00209270 (evm_27.TU.AmTr_v1.0_scaffold00063.85)
 0.0 0.0 0.15 0.23 0.95 0.0 0.0 0.0 0.0 0.07 3.42 0.0 0.3 0.08 0.37 0.0 5.26 0.0 0.0 0.0 0.0 1.38
AMTR_s00063p00212080 (evm_27.TU.AmTr_v1.0_scaffold00063.92)
 0.0 16.82 0.0 0.0 1.1 0.0 0.0 0.0 0.0 0.0 19.53 5.62 3.83 0.55 0.46 1.52 5.56 6.88 7.77 5.55 0.88 11.01
AMTR_s00063p00212140 (evm_27.TU.AmTr_v1.0_scaffold00063.93)
 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00064p00080140 (evm_27.TU.AmTr_v1.0_scaffold00064.26)
 0.0 0.0 0.0 0.0 0.14 0.0 0.0 0.0 0.01 0.0 5.51 5.97 0.11 0.0 0.08 0.0 8.51 0.0 0.0 4.24 0.0 0.53
AMTR_s00075p00073210 (evm_27.TU.AmTr_v1.0_scaffold00075.17)
 2.09 0.0 0.47 5.16 15.56 1.54 0.27 0.04 0.58 0.73 10.85 14.72 5.58 3.59 11.81 4.28 5.18 2.24 2.22 2.0 0.38 4.87
AMTR_s00080p00170570 (evm_27.TU.AmTr_v1.0_scaffold00080.86)
 0.0 0.0 0.0 1.41 0.91 0.0 0.07 1.64 0.2 0.27 0.51 0.59 0.32 0.41 0.91 0.4 0.28 0.52 0.26 1.8 0.93 0.47
AMTR_s00096p00128670 (evm_27.TU.AmTr_v1.0_scaffold00096.82)
 38.65 41.19 32.27 4.74 4.77 0.0 3.87 21.59 13.1 11.43 20.2 17.4 30.02 6.9 17.53 0.0 20.75 12.19 6.09 4.17 2.73 8.84
AMTR_s00100p00072970 (evm_27.TU.AmTr_v1.0_scaffold00100.18)
 0.5 0.0 0.0 0.0 0.52 0.83 0.05 0.04 0.02 0.02 0.24 0.0 0.2 0.09 0.1 0.0 0.27 0.0 0.0 0.07 0.0 0.1
AMTR_s00106p00075160 (evm_27.TU.AmTr_v1.0_scaffold00106.47)
 0.17 0.0 0.0 0.04 0.05 0.0 0.0 0.0 0.02 0.0 0.53 0.0 0.31 0.02 0.05 0.27 0.1 0.0 0.0 0.31 0.34 0.17
AMTR_s00109p00134110 (evm_27.TU.AmTr_v1.0_scaffold00109.140)
 0.0 0.0 0.0 0.43 1.18 0.0 0.01 0.11 0.0 0.01 1.83 1.19 0.35 0.12 1.05 0.22 0.4 0.0 0.08 0.28 0.0 0.07
AMTR_s00116p00105170 (evm_27.TU.AmTr_v1.0_scaffold00116.24)
 0.0 0.0 1.15 0.0 1.88 0.0 0.07 5.97 0.3 0.23 1.97 0.85 0.35 0.17 2.11 0.0 0.77 0.74 0.99 0.39 0.0 0.0
AMTR_s00122p00121150 (evm_27.TU.AmTr_v1.0_scaffold00122.58)
 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0 0.3 0.5 0.11 0.09 0.16 0.0 0.24 0.44 0.0 0.92 0.79 0.5
AMTR_s00129p00054300 (evm_27.TU.AmTr_v1.0_scaffold00129.28)
 0.0 0.0 0.0 0.0 1.59 0.0 0.02 0.0 0.04 0.05 3.02 0.0 1.52 0.06 0.25 0.0 0.79 0.55 0.84 0.04 0.0 2.35
AMTR_s00130p00092880 (evm_27.TU.AmTr_v1.0_scaffold00130.44)
 0.0 0.0 0.0 0.0 1.6 0.0 0.0 0.0 0.0 0.07 1.95 0.0 0.06 0.0 0.14 0.0 0.78 0.0 0.0 0.0 0.0 0.0
AMTR_s00135p00099480 (evm_27.TU.AmTr_v1.0_scaffold00135.56)
 0.0 0.0 0.0 0.0 0.18 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.19 0.0 0.0 0.0 0.0 0.0
AMTR_s00146p00054490 (evm_27.TU.AmTr_v1.0_scaffold00146.30)
 0.0 0.0 0.0 0.0 0.41 0.0 0.0 0.0 0.0 0.0 0.39 1.34 0.2 0.13 0.71 0.91 0.34 0.0 0.0 0.46 1.06 0.0
AMTR_s00147p00083620 (evm_27.TU.AmTr_v1.0_scaffold00147.43)
 0.0 0.0 0.0 0.0 0.04 0.0 0.02 0.0 0.03 0.0 0.22 0.38 0.06 0.06 0.14 0.0 0.0 0.0 0.0 0.42 0.3 0.0
AMTR_s00155p00058390 (evm_27.TU.AmTr_v1.0_scaffold00155.31)
 0.0 2.74 0.0 1.49 1.39 0.0 0.88 15.99 0.58 0.2 15.2 10.52 6.21 4.88 14.17 0.0 7.72 9.21 18.15 55.17 16.54 9.48
AMTR_s00156p00029590 (evm_27.TU.AmTr_v1.0_scaffold00156.10)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0
AMTR_s00159p00060860 (evm_27.TU.AmTr_v1.0_scaffold00159.23)
 0.0 0.0 0.0 0.39 2.96 0.0 0.09 0.0 0.39 0.44 1.01 0.0 0.03 0.54 0.85 0.0 1.71 0.0 0.0 2.3 1.02 0.55
AMTR_s00387p00015040 (evm_27.TU.AmTr_v1.0_scaffold00387.1)
 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.18 0.0 0.0 0.0 0.03 0.0 0.28 0.0 0.0 0.0 0.0 0.0
AMTR_s00685p00011140 (evm_27.TU.AmTr_v1.0_scaffold00685.1)
 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.22 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s01089p00001250 (evm_27.TU.AmTr_v1.0_scaffold01089.1)
 31.58 6.63 19.13 0.88 8.49 0.1 0.06 0.06 0.06 0.07 24.81 0.0 9.02 19.3 7.98 0.0 9.86 0.0 3.83 17.27 7.02 29.52
AMTR_s01775p00008970 (evm_27.TU.AmTr_v1.0_scaffold01775.2)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.18 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.43
AMTR_s03035p00009310 (evm_27.TU.AmTr_v1.0_scaffold03035.1)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.58 0.0 0.41 0.0 0.11 1.35 0.0 0.0 0.0 0.0 0.0 0.18

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)