Heatmap: Cluster_102 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Aerial tissue - Light - ZT1	Aerial tissue - Light - ZT3	Aerial tissue - Light - ZT5	Aerial tissue - Light - ZT7	Aerial tissue - Light - ZT9	Aerial tissue - Light - ZT11	Aerial tissue - Dark - ZT1	Aerial tissue - Dark - ZT3	Aerial tissue - Dark - ZT5	Aerial tissue - Dark - ZT7	Aerial tissue - Dark - ZT9	Aerial tissue - Dark - ZT11	Roots	Root elongation and differentiation zone	Root meristematic zone	Aerial roots and rhizophores	Shoot tips	Microphyll	Strobili	Shoot apical meristem - AC	Shoot apical meristem - Core	Shoot apical meristem - P1	Stem - Top	Stem - Bottom	Whole plant	Aerial tissue - Stress - Dark	Aerial tissue - Stress - High light	Aerial tissue - Stress - Cont	Aerial tissue - Stress - 37C 1h	Aerial tissue - Stress - 37C 3h	Aerial tissue - Stress - 4C 1h	Aerial tissue - Stress - 4C 3h
Smo100916	-0.09	0.08	0.05	0.15	0.27	0.21	0.05	0.19	-0.0	-0.0	-0.01	-0.19	-0.1	-0.11	0.1	0.16	-0.37	-0.84	0.22	-2.96	-1.24	-1.53	-0.13	-0.05	0.29	0.88	0.96	1.03	-0.4	-0.37	-0.33	-0.41
Smo100977	0.34	0.39	0.21	0.35	0.37	0.31	0.02	0.26	0.22	0.33	0.34	0.24	-0.04	-0.31	-0.2	-0.05	-0.57	-1.42	-0.16	-3.11	-3.1	-3.38	-0.06	0.02	0.5	0.87	0.67	0.56	-0.5	-0.41	-0.24	-0.16
Smo102852	-0.02	0.02	-0.08	0.14	0.17	0.07	0.09	0.25	0.25	0.17	0.15	0.12	-0.1	0.21	0.1	0.07	-0.56	-1.3	0.06	-0.76	-2.44	-1.47	-0.28	-0.09	0.24	0.93	0.85	0.84	-0.46	-0.35	-0.25	-0.41
Smo103062	-1.62	-1.5	-0.68	0.17	0.63	0.55	0.78	0.43	-0.42	-0.14	-0.69	-1.14	-0.41	0.66	-2.18	0.74	-0.94	-0.41	0.79	-3.14	-1.67	-4.98	0.06	-0.44	-0.47	1.37	1.25	1.35	-0.73	-0.85	0.23	-0.41
Smo140469	-0.0	0.05	0.27	0.36	0.55	0.59	0.39	0.5	0.12	-0.05	-0.02	-0.21	-0.1	-0.77	-0.52	0.33	-0.09	-0.53	0.3	-3.98	-4.73	-4.44	0.21	0.06	-2.86	1.09	0.59	0.72	0.13	0.22	-0.4	-0.42
Smo141188	-0.02	0.12	0.14	0.16	0.34	0.21	0.35	0.29	0.27	0.26	0.17	0.04	-0.04	-0.13	0.46	0.11	-0.67	-2.65	-0.18	-1.58	-1.27	-2.23	-0.52	-0.45	-0.3	1.04	1.13	1.14	-0.58	-0.43	-0.79	-0.8
Smo163827	-0.04	-0.06	0.25	0.66	0.79	0.85	0.55	0.45	0.02	-0.03	-0.19	-0.07	-0.52	-0.26	-0.51	-0.52	-0.39	-1.16	-0.21	-1.84	-1.98	-3.05	-0.45	-0.55	0.17	0.38	0.96	1.17	-0.55	-0.42	-0.16	0.13
Smo166381	0.22	0.08	-0.03	0.1	0.09	0.06	-0.02	0.31	0.2	0.26	0.22	0.2	-0.06	-0.18	-0.4	0.03	-0.71	-1.2	-0.03	-2.19	-2.47	-4.74	-0.3	-0.11	0.73	1.08	0.96	0.91	-0.46	-0.38	-0.12	-0.13
Smo170784	0.05	0.05	0.17	0.18	0.23	0.22	-0.06	0.3	0.21	0.1	0.17	-0.03	0.53	0.28	0.24	0.28	-0.91	-1.2	0.12	-3.7	-4.07	-3.32	0.06	0.29	-0.04	0.78	0.84	1.04	-0.43	-0.36	-0.86	-0.81
Smo17087	-0.51	-0.08	0.53	0.63	0.81	0.72	0.44	0.42	0.1	0.26	0.03	-0.24	0.95	0.25	-1.15	1.1	-1.63	-2.19	-1.22	-2.36	-3.19	-8.74	-0.59	-0.63	-2.03	1.9	0.67	0.91	-1.29	-0.89	-2.25	-2.23
Smo173762	0.25	0.07	-0.12	0.32	0.37	0.25	0.18	0.48	0.5	0.41	0.32	0.31	0.29	0.08	-0.06	0.29	-0.77	-1.21	0.12	-2.46	-2.91	-2.15	-0.34	0.04	0.06	0.89	0.49	0.66	-0.36	-0.29	-1.21	-0.95
Smo177510	0.15	0.44	0.57	0.39	0.59	0.46	0.26	0.15	0.14	0.2	0.06	0.13	0.51	-0.3	-0.78	0.12	-0.65	-0.72	-0.35	-3.59	-5.4	-1.14	-0.15	-0.27	-0.95	0.58	0.83	0.87	-0.7	-0.69	-0.07	0.21
Smo20996	-0.67	0.08	0.01	0.33	0.27	0.38	0.31	0.11	-0.34	-0.5	-0.67	-0.71	-0.42	-1.18	-1.01	0.55	0.02	-0.72	0.4	-3.11	-2.22	-2.37	0.06	0.2	0.12	1.17	1.32	1.41	-0.26	-0.28	-0.41	-0.4
Smo228404	0.11	0.2	0.26	0.22	0.3	0.36	0.2	0.3	0.22	0.06	-0.0	-0.14	0.07	-0.24	-0.12	0.17	-0.49	-0.75	0.02	-1.67	-0.91	-1.44	-0.13	-0.08	-0.03	0.62	0.81	0.83	-0.25	-0.25	-0.55	-0.6
Smo230648	0.0	0.06	0.1	0.7	0.81	0.61	0.16	0.25	0.15	0.03	-0.19	-0.37	-0.31	-0.38	-1.11	0.17	-0.15	-0.84	0.45	-6.52	-2.38	-5.58	0.01	-0.11	-0.28	1.11	0.64	0.93	-0.23	-0.16	-0.23	-0.49
Smo233533	0.01	0.12	0.1	0.06	0.16	0.09	0.05	0.14	0.04	0.1	-0.02	-0.04	0.08	-0.28	-0.4	0.29	-0.51	-0.82	0.22	-0.61	-1.53	-1.09	-0.24	-0.11	0.48	0.89	0.74	0.78	-0.3	-0.25	-0.36	-0.32
Smo234938	-0.18	0.22	0.56	0.77	0.88	0.69	0.35	0.29	0.05	0.07	-0.06	-0.16	-0.03	0.39	-1.09	0.33	-0.6	-2.75	0.25	-1.39	-2.43	-4.23	-0.05	0.04	-0.49	1.07	0.56	0.78	-0.82	-0.79	-0.97	-0.79
Smo267064	0.02	0.03	0.08	0.28	0.13	0.08	0.08	0.29	0.29	0.37	0.36	0.25	-0.03	-0.52	-0.78	-0.09	-0.42	-1.04	0.11	-3.12	-1.01	-2.1	0.12	0.14	0.36	0.77	0.54	0.48	-0.32	-0.21	0.12	0.18
Smo267596	-0.46	-0.24	-0.03	0.22	0.32	0.63	0.57	0.55	0.05	-0.03	-0.17	-0.36	0.23	0.47	-0.03	0.42	-0.43	-0.9	-0.03	-2.73	-1.46	-2.78	0.04	0.12	-0.12	0.87	0.84	0.86	-0.59	-0.49	-0.66	-0.76
Smo268528	-0.33	0.27	0.52	0.53	0.58	0.58	0.2	0.07	-0.17	-0.1	-0.22	-0.39	0.18	0.46	-1.17	0.47	-0.57	-1.13	0.34	-4.41	-2.26	-4.66	0.08	0.09	-0.38	1.34	0.87	1.1	-0.91	-0.8	-1.11	-0.96
Smo270344	-1.14	0.15	0.35	0.54	0.85	0.9	0.77	0.22	-0.23	-0.38	-0.74	-0.91	-0.65	0.71	-0.98	0.97	-1.01	-1.11	0.87	-3.11	-1.56	-4.99	-0.8	-0.77	-0.18	1.09	0.85	1.34	-0.53	-0.52	-1.93	-2.14
Smo404271	0.02	0.03	0.09	0.22	0.1	0.09	0.27	0.3	0.23	0.2	0.09	0.08	0.05	-0.1	-0.41	0.2	-0.45	-0.79	-0.11	-1.96	-1.44	-1.4	-0.29	-0.31	-0.03	0.91	1.01	0.96	-0.47	-0.38	-0.27	-0.25
Smo405568	0.37	0.46	0.54	0.65	0.47	0.37	0.48	0.57	0.3	0.15	0.2	-0.12	0.19	-0.08	-0.37	0.08	-0.4	-0.54	-0.37	-6.68	-5.61	-9.16	-0.18	-0.16	-2.3	-0.07	1.02	0.93	-1.3	-1.21	0.51	0.08
Smo413912	0.34	0.17	-0.0	0.17	0.27	0.23	-0.04	0.19	0.21	0.17	0.19	0.14	-0.09	-0.36	-0.35	0.21	-0.4	-0.61	0.34	-2.22	-2.74	-2.49	-0.27	-0.24	0.13	0.86	0.82	0.86	-0.3	-0.24	-0.39	-0.01
Smo416778	-0.02	0.12	0.11	0.21	0.24	0.27	0.18	0.51	0.35	0.21	0.24	0.05	-0.39	-0.29	0.26	0.0	-0.41	-0.94	0.05	-2.89	-1.97	-2.54	-0.16	-0.08	0.56	0.72	0.69	0.93	-0.3	-0.22	-0.58	-0.64
Smo420048	0.24	0.29	0.18	0.25	0.29	0.27	0.11	0.26	0.22	0.42	0.34	0.17	-0.03	-0.28	-0.12	0.04	-0.58	-1.0	-0.02	-3.21	-1.38	-2.2	-0.21	-0.19	0.12	0.96	0.56	0.74	-0.23	-0.12	-0.47	-0.59
Smo424575	0.12	0.1	-0.17	0.1	0.26	0.26	0.02	0.3	0.01	0.14	0.12	0.03	0.11	0.36	0.3	0.22	-0.69	-0.91	0.03	-2.33	-1.26	-1.88	-0.21	0.04	0.42	0.85	0.82	0.81	-0.64	-0.53	-0.64	-0.54
Smo440989	0.47	0.3	0.23	0.24	0.32	0.27	-0.05	0.08	0.18	0.02	0.19	-0.06	0.19	0.41	0.17	0.37	-0.51	-0.98	-0.01	-2.99	-1.63	-2.28	-0.05	0.05	0.06	0.85	0.64	0.73	-0.57	-0.41	-0.84	-0.92
Smo441653	-0.07	0.11	0.14	0.15	0.34	0.22	0.29	0.35	0.1	0.06	-0.04	-0.16	0.1	0.02	-0.09	0.05	-1.08	-3.55	-0.25	-0.88	-1.84	-1.83	-0.45	-0.23	0.15	1.31	1.25	1.38	-0.86	-0.74	-0.97	-1.02
Smo442772	0.0	0.17	0.18	0.17	0.25	0.19	0.37	0.25	0.16	0.1	0.18	-0.07	-0.12	-0.64	-0.03	0.08	-0.76	-2.59	0.18	-0.83	-1.5	-2.0	-0.28	-0.13	0.58	1.18	1.06	1.02	-0.69	-0.8	-0.85	-0.94
Smo443608	0.23	0.24	0.11	0.19	0.08	0.09	0.02	0.08	0.1	0.18	0.1	0.12	-0.06	0.29	0.2	0.2	-0.57	-1.02	0.17	-1.45	-0.9	-1.84	-0.44	-0.32	0.17	0.85	0.7	0.86	-0.25	-0.16	-0.6	-0.73
Smo443642	-1.04	-0.53	-0.14	0.13	0.52	0.57	0.4	0.62	0.1	-0.02	-0.49	-0.53	-1.21	-2.26	-2.24	1.12	-0.69	-0.74	0.5	-2.52	-1.6	-2.74	-0.27	-0.33	-0.86	1.01	1.68	1.9	-0.73	-0.53	-1.43	-1.19
Smo444048	0.06	0.17	0.36	0.82	0.9	0.76	0.54	0.44	0.27	0.19	0.04	-0.22	-0.32	-0.85	-1.08	-0.14	-0.3	-1.32	-0.04	-3.76	-4.3	-4.76	-0.5	-0.53	-1.11	0.6	1.03	1.03	-0.61	-0.59	0.26	0.15
Smo444118	-0.27	-0.3	-0.04	0.08	0.24	0.25	0.15	0.39	0.27	0.11	0.12	-0.24	0.51	0.48	0.5	0.24	-0.92	-1.41	-0.62	-0.07	-1.43	-0.63	-0.7	-0.41	-1.5	1.59	0.99	0.99	-1.04	-1.04	-1.5	-1.5
Smo447027	-0.39	-0.3	-0.12	0.17	0.27	0.14	0.18	0.5	0.33	0.23	0.14	-0.17	-0.26	0.17	0.04	-0.1	-0.58	-1.16	-0.05	-1.46	-1.57	-2.1	-0.18	-0.1	0.33	1.07	1.07	1.19	-0.28	-0.22	-1.05	-1.19
Smo53758	-0.2	-0.01	-0.09	-0.01	0.07	0.13	0.12	0.21	0.11	0.09	-0.0	-0.09	0.08	0.23	-0.54	0.35	-0.33	-0.79	0.06	-3.01	-0.22	-1.82	-0.04	0.11	-0.15	0.88	0.99	1.19	-0.26	-0.23	-0.79	-0.86
Smo61383	0.11	0.01	-0.06	0.13	0.47	0.32	0.28	0.5	0.36	0.27	0.12	0.13	-0.47	-0.58	0.02	-0.49	-0.36	-0.65	0.67	-3.54	-0.84	-1.18	-0.39	-0.41	0.36	0.58	0.83	0.78	-0.35	-0.31	-0.64	-0.55
Smo75723	-0.27	0.01	0.32	0.63	0.49	0.3	-0.15	-0.08	-0.31	-0.33	-0.45	-0.33	0.01	0.02	0.11	0.05	-0.16	-0.71	0.13	-1.93	-1.09	-2.14	0.02	0.02	0.14	1.12	1.0	0.98	-0.57	-0.52	-0.57	-0.45
Smo78506	-0.02	0.12	0.14	0.16	0.34	0.21	0.35	0.29	0.27	0.26	0.17	0.04	-0.04	-0.13	0.46	0.11	-0.67	-2.65	-0.18	-1.58	-1.27	-2.23	-0.52	-0.45	-0.3	1.04	1.13	1.14	-0.58	-0.43	-0.79	-0.8
Smo80477	0.27	0.23	0.26	0.23	0.34	0.34	0.07	0.41	0.33	0.32	0.39	0.24	-0.53	0.06	-0.21	-0.29	-0.31	-0.73	0.31	-5.8	-3.74	-2.83	-0.52	-0.65	-0.35	0.87	0.73	0.44	-0.1	-0.22	0.13	0.23
Smo83918	-0.07	0.16	0.22	0.4	0.37	0.44	0.22	0.42	0.02	-0.11	-0.04	-0.22	0.2	-0.1	-0.46	0.37	-0.89	-1.39	0.21	-3.47	-1.05	-2.33	0.21	0.35	0.05	0.84	1.02	0.87	-0.72	-0.61	-0.71	-0.76
Smo84578	0.12	0.03	0.25	0.58	0.82	0.82	0.52	0.37	0.16	0.09	-0.05	-0.19	0.06	-0.15	-0.43	0.1	-0.38	-1.29	0.06	-4.67	-2.87	-6.53	-0.27	-0.29	-1.34	0.68	0.86	0.96	-0.75	-0.8	-0.08	0.33
Smo89324	0.05	0.06	0.25	0.5	0.67	0.75	0.44	0.62	0.32	0.33	0.09	-0.11	-0.02	0.04	-0.93	-0.2	-0.44	-1.1	0.22	-1.34	-7.25	-3.69	-0.48	-0.56	-1.04	0.09	0.98	1.09	-0.48	-0.43	-0.05	-0.1
Smo91055	-0.42	0.03	0.17	0.61	0.71	0.66	0.38	0.15	-0.13	-0.34	-0.46	-0.59	0.45	0.38	0.14	0.36	-0.44	-0.96	0.22	-3.64	-2.7	-3.41	-0.01	-0.01	-0.55	1.02	0.99	0.73	-0.87	-0.75	-0.44	-0.22
Smo91404	0.25	0.35	0.11	0.59	0.66	0.41	0.13	0.52	0.29	0.24	0.25	0.29	0.01	0.33	0.17	0.09	-0.75	-3.26	-0.4	-3.48	-3.76	-4.22	-0.6	-0.63	0.24	0.96	1.04	0.96	-0.72	-0.69	-0.97	-1.24
Smo95450	0.1	0.11	0.34	0.74	0.9	0.65	0.63	0.41	0.11	0.15	0.11	-0.02	-0.56	-0.25	-0.39	-0.24	-0.6	-1.23	0.13	-4.96	-3.26	-3.44	-0.37	-0.48	-1.33	0.72	0.83	1.03	-0.69	-0.72	-0.03	0.32

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.