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Heatmap: Cluster_147 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.56 0.57 0.49 0.5 0.55 0.52 0.27 0.61 0.53 0.57 0.54 0.5 -1.8 -1.97 -2.03 -0.87 0.11 -0.96 0.33 -6.66 -3.96 - 0.06 -0.17 -0.92 0.12 0.09 0.52 0.67 0.78 -0.68 -0.83
-0.22 0.34 0.31 0.66 0.74 0.83 0.58 0.3 -0.01 -0.32 -0.48 -0.34 -2.37 -1.83 -2.15 -1.79 0.92 -0.07 0.03 -3.82 -2.82 -6.43 0.03 -0.69 -0.49 -0.62 0.77 1.25 0.72 0.72 0.31 -0.2
-0.45 -0.64 -0.14 -0.36 -0.44 -0.28 0.56 0.39 0.42 0.42 0.16 -0.09 -8.06 -11.07 -12.12 -6.39 1.49 1.21 -1.4 -2.03 0.57 -8.05 -1.47 -3.71 -1.92 -3.26 -2.55 -2.62 1.93 1.74 1.05 1.16
0.88 0.34 0.13 0.24 0.21 0.22 0.41 -0.11 0.33 0.35 0.54 0.57 -1.76 -0.95 -0.45 -1.18 0.61 0.59 0.67 -2.1 -1.37 -3.89 -0.87 -1.43 0.02 -1.67 -0.16 -0.37 0.7 0.71 0.14 -0.01
0.17 -0.09 -0.04 -0.04 -0.03 0.12 0.19 0.37 0.36 0.33 0.25 0.26 -1.78 -1.65 -2.63 -1.22 0.81 0.52 -0.09 -2.41 -0.38 -2.26 0.15 -0.09 0.14 -0.33 0.07 0.12 0.75 0.72 0.49 0.33
0.05 0.22 0.16 0.23 0.43 0.5 0.44 0.41 0.75 0.59 0.41 0.3 -2.64 -3.1 -2.57 -1.61 0.58 0.15 0.16 -0.91 -0.8 -3.55 -0.31 -0.99 0.1 0.26 -0.13 0.02 0.64 0.53 0.21 -0.04
-0.39 -0.23 0.47 0.76 0.83 0.77 0.78 0.56 0.28 -0.11 -0.16 -0.21 -3.64 -2.03 -3.15 -1.75 0.74 -0.07 -0.6 -4.11 -1.13 -4.84 0.43 0.32 -0.79 -0.3 0.39 0.4 0.24 0.33 0.34 0.9
0.73 0.67 0.8 0.51 0.54 0.51 0.61 0.63 0.51 0.44 0.59 0.61 -8.28 -3.65 -8.73 -3.77 1.06 0.97 -1.31 -5.39 -2.29 -6.81 -0.29 -1.42 -3.51 -1.65 -0.08 0.22 0.75 0.58 0.33 -0.29
0.09 -0.03 -0.14 -0.08 0.04 0.2 0.27 0.03 0.32 0.17 0.13 0.14 -3.25 -1.22 -1.99 -2.27 0.6 0.58 -0.05 -1.06 -0.04 -0.76 -0.2 -0.57 0.23 0.0 0.69 0.91 0.38 0.39 0.1 0.28
0.39 0.29 0.23 0.28 0.21 0.26 0.18 0.13 0.29 0.33 0.31 0.06 -1.24 -1.8 -1.87 -1.24 0.93 0.6 0.53 -2.0 -2.21 -2.4 0.03 -0.31 -1.29 0.16 -0.55 -0.27 0.81 0.98 0.18 0.12
0.09 0.14 0.4 0.59 0.54 0.59 0.48 0.23 0.04 -0.21 -0.15 -0.18 -0.49 0.11 0.42 -0.23 0.22 -0.0 0.15 -2.45 -0.95 -1.08 -0.19 -0.53 -0.43 -0.12 0.53 0.54 0.01 0.03 -0.49 -0.98
0.08 -0.01 0.4 0.45 0.64 0.81 0.85 0.71 0.75 0.55 0.5 0.35 -3.4 -2.11 -3.03 -2.46 0.81 0.41 -0.46 -1.54 -0.07 -2.17 -0.07 -0.59 -0.09 -2.07 -0.24 -0.11 0.55 0.45 -0.4 -0.84
-0.11 0.16 0.17 0.24 0.37 0.58 0.94 0.58 0.62 0.61 0.62 0.45 -4.15 -2.28 -2.52 -1.98 0.83 0.11 -0.49 -3.34 -0.53 -3.17 -0.66 -1.77 -0.06 -1.64 0.34 0.5 0.8 0.7 0.04 0.07
0.33 0.19 0.26 0.12 0.12 0.23 0.15 -0.16 -0.04 -0.2 -0.14 -0.13 -2.85 -0.65 -1.49 -1.83 0.59 0.58 0.33 -2.56 0.02 -4.11 -0.44 -0.29 0.45 0.75 0.67 0.92 0.35 0.4 -0.08 -0.23
0.2 0.57 0.64 0.59 0.77 0.79 0.42 0.47 0.21 0.21 0.39 0.07 -0.91 -0.54 -0.88 -1.26 0.16 0.7 0.22 -5.79 -1.82 -3.12 -0.21 -0.61 -1.93 -1.68 -0.46 -0.1 0.29 0.61 0.24 0.36
0.09 0.77 0.41 0.22 0.25 0.29 0.8 0.17 0.77 0.51 0.75 0.43 -5.5 -4.93 -7.95 -1.82 0.24 0.35 0.34 -1.65 -0.34 -6.38 0.31 -0.15 -0.46 -2.42 -1.29 -0.79 0.95 1.34 -0.4 -0.21
0.01 0.4 0.16 0.11 0.56 0.83 0.42 0.37 0.18 -0.16 -0.17 -0.27 -0.73 -1.21 -0.24 -0.95 0.63 0.83 0.14 -2.8 -0.75 -1.61 -0.1 -0.33 -0.09 -1.98 0.09 0.15 0.3 0.4 0.13 0.28
-0.02 0.44 0.26 -0.13 0.25 0.74 0.87 0.72 0.7 0.43 0.14 0.33 -1.7 -1.34 -1.58 -1.21 0.68 -0.08 0.02 -1.36 -1.84 -0.87 -0.22 -0.67 -0.04 -0.98 -0.21 0.06 0.79 0.7 -0.42 -0.58
-0.45 -0.36 -0.0 -0.05 0.06 0.26 0.34 0.29 0.14 0.24 0.0 -0.25 -0.65 -1.09 -1.6 -0.16 0.68 0.85 -0.17 -1.32 0.23 -1.56 -0.17 -0.43 -0.36 -0.59 0.11 0.23 0.78 0.69 0.43 0.19
0.05 0.03 0.23 0.37 0.59 0.32 0.81 0.69 0.58 0.51 0.54 0.47 -3.61 -3.19 -3.33 -2.29 0.47 -0.04 0.04 -1.17 -0.71 -0.07 -0.24 -0.84 -1.77 -0.92 0.05 -0.05 0.77 0.81 -0.04 0.07
0.42 0.37 0.37 0.44 0.63 0.97 0.42 0.25 0.17 0.07 -0.1 0.13 -0.2 -0.36 0.22 0.11 0.07 -0.21 0.31 - -0.63 -2.36 -0.11 -0.08 -2.68 -0.35 0.56 0.72 -0.24 -0.29 -0.84 -1.17
0.43 0.88 0.96 0.65 0.46 0.67 0.2 0.05 0.34 0.27 0.11 0.2 -0.12 -0.6 -0.09 -0.61 0.56 0.71 -2.01 -0.9 -0.18 -1.28 0.89 -0.44 -2.65 -1.9 -1.72 -1.37 0.06 0.03 -0.55 -0.66
-0.54 0.48 0.65 0.81 1.13 1.31 0.16 -0.55 -0.07 -0.95 -1.07 -1.57 -3.8 -6.26 -4.8 -3.26 0.87 -0.26 -0.38 -7.88 -1.79 -5.61 1.07 -0.14 1.28 -1.02 1.03 0.83 0.44 0.68 -0.91 -0.65
0.63 0.7 0.85 0.66 0.58 0.39 0.53 0.01 0.24 0.08 0.48 0.23 0.71 -2.67 -0.03 -0.27 0.49 -0.33 -1.76 -6.37 - -2.04 1.44 -0.29 -3.2 -1.24 -0.91 -0.31 0.03 0.05 -0.33 -0.4
0.22 0.21 0.5 0.54 0.19 0.31 0.87 0.27 0.47 -0.11 0.31 0.15 -3.07 -2.1 -1.72 -2.59 1.16 0.75 0.72 -3.05 -0.32 -2.11 -1.57 -1.74 -0.66 0.22 0.63 -0.25 0.47 0.56 -0.44 -0.38
-0.58 -0.39 0.32 0.56 0.84 1.0 1.06 0.9 0.69 0.28 0.29 -0.09 -3.68 -2.76 -3.04 -2.76 0.78 0.3 -1.08 -0.94 -0.05 -1.82 -0.29 -0.96 -1.46 -0.95 0.09 0.08 0.52 0.46 0.17 0.2
0.06 0.11 0.29 0.4 0.49 0.79 0.75 0.39 0.42 0.04 0.07 -0.17 -1.42 -0.76 -1.17 -1.26 0.18 0.0 0.12 -4.82 -0.84 -3.87 -0.15 -0.42 -0.81 -0.67 0.67 0.71 0.28 0.49 0.34 0.32
0.25 0.37 0.18 0.09 0.53 0.51 0.3 0.2 -0.01 -0.28 -0.13 -0.33 -1.09 -0.18 -0.63 -0.33 0.48 0.59 0.31 -1.92 -1.0 -0.86 -0.11 -0.08 -0.3 -1.19 0.1 0.02 0.35 0.35 0.28 0.39
0.34 0.12 0.24 0.24 0.55 0.43 0.57 0.47 0.57 0.11 0.39 0.25 -2.24 -1.19 -2.77 -1.3 -0.01 0.35 -0.29 -4.27 -1.96 - -0.01 -0.33 -0.82 -0.36 0.95 0.67 0.31 0.48 0.32 0.49
-3.35 -2.34 -1.03 0.12 1.43 1.59 0.87 0.34 0.01 -0.45 -0.81 -1.47 -1.24 -0.91 -2.52 -0.13 0.76 0.83 -0.63 -2.41 -1.48 -7.57 0.92 -1.13 0.8 -2.28 0.54 0.71 0.78 0.78 -1.16 -0.59
0.25 0.46 0.59 0.61 0.74 0.87 0.25 -0.25 0.12 -0.06 -0.13 -0.41 -1.7 -2.13 -1.58 -0.94 1.3 0.39 0.65 -5.4 -1.75 -9.02 0.41 0.17 -0.04 -0.78 0.21 0.72 0.35 0.34 -1.49 -1.4
0.69 0.71 0.55 0.49 0.58 0.43 0.19 -0.1 0.3 0.23 0.13 -0.1 -0.82 -0.92 -2.18 -0.09 0.21 -0.01 -1.13 -0.96 -1.99 -0.58 0.89 0.67 -1.11 -1.25 -0.36 0.02 0.15 0.25 -0.2 -0.07
0.41 0.95 0.77 0.61 0.51 0.48 0.72 0.09 0.05 0.1 -0.09 -0.17 -1.25 -0.75 -1.47 -0.24 0.77 -0.07 -0.04 -2.65 -1.78 -5.59 0.25 -0.67 -0.95 -0.52 0.1 0.94 0.67 0.71 -1.94 -2.15
0.19 0.45 0.45 0.49 0.48 0.33 0.11 0.19 0.35 0.04 0.1 -0.1 -1.98 -1.06 -3.2 -1.45 1.01 0.84 0.25 - -3.5 -9.05 0.13 -0.37 -2.3 -0.81 0.74 0.99 0.73 0.73 -0.45 -0.15
0.29 0.35 0.25 0.31 0.48 0.57 0.37 0.37 0.46 0.43 0.5 0.03 -0.99 -1.39 -1.39 -0.65 0.53 0.21 0.37 -7.54 -4.08 - -0.01 -0.12 -2.23 -0.37 0.12 0.33 0.63 0.6 0.2 0.21
-0.23 0.24 0.35 0.29 0.67 0.73 0.67 0.63 0.37 0.25 -0.02 0.18 -0.9 -1.57 -1.49 0.35 0.25 0.36 0.67 -2.07 -2.93 - 0.23 -0.33 -1.23 -0.91 -0.4 0.37 0.43 0.3 -0.17 0.15
0.07 0.24 0.54 0.59 0.61 0.57 0.79 0.45 0.51 0.47 0.38 0.36 -4.71 -3.89 -5.12 -2.71 1.03 0.31 -0.57 - -5.66 - -0.04 -0.9 -3.68 -0.87 0.59 0.88 0.98 0.81 0.16 -0.49
-0.1 -0.07 0.21 0.23 0.43 0.49 0.47 0.37 0.39 0.2 0.0 -0.01 -1.58 -0.76 -1.46 -1.22 1.0 0.82 -0.28 -2.07 -0.53 -2.22 0.03 -0.41 -0.56 -1.27 -0.09 0.13 0.74 0.65 0.29 0.13
0.77 1.02 0.82 0.44 0.49 0.63 0.22 -0.05 0.57 0.45 0.12 -0.07 0.34 0.04 -6.49 0.19 0.25 0.6 -0.6 -5.85 -2.3 -8.89 1.13 0.34 -4.87 -1.59 -1.16 -0.62 -0.26 -0.16 -0.37 -0.47
0.14 0.38 0.51 0.31 0.3 0.2 0.45 0.24 0.47 0.4 0.42 0.26 -3.03 -3.09 -4.95 -1.99 0.77 0.35 0.36 -5.2 -2.94 -4.96 0.48 0.54 -1.58 -0.1 0.22 0.27 0.73 0.66 0.03 0.09
-0.03 -0.17 -0.1 0.25 0.11 0.23 0.53 0.36 0.29 0.43 0.1 0.19 -2.62 -1.81 -2.17 -1.58 0.74 0.61 0.55 -2.3 -0.86 -4.78 -0.31 -1.03 -0.71 0.11 0.94 0.62 0.92 0.71 -0.13 -0.16
0.22 0.37 0.33 0.59 0.55 0.53 0.72 0.19 0.36 0.03 0.12 0.21 -1.18 -1.28 -1.53 -1.3 1.11 0.52 -1.22 -2.89 -0.01 -2.23 -0.16 -0.65 0.24 -1.32 0.21 0.44 0.51 0.41 -0.39 -1.27
-0.08 0.25 0.45 0.38 0.36 0.63 0.17 -0.11 -0.32 -0.72 -0.44 -0.58 -0.88 -0.43 -0.16 -0.46 0.51 0.28 -0.25 -0.24 -0.57 -0.14 -0.28 -0.4 0.91 -0.71 0.76 1.03 0.08 0.15 -1.5 -1.5
-0.25 -0.2 -0.02 0.25 0.56 0.77 0.71 0.7 0.46 0.08 -0.01 -0.16 -0.98 -0.74 -0.15 -0.91 0.58 0.11 -0.07 -1.11 -1.46 -2.48 -0.16 -0.07 -1.03 -0.66 0.42 0.69 0.44 0.46 -0.15 -0.43
0.51 0.54 0.53 0.49 0.5 0.31 -0.04 -0.36 0.15 -0.19 0.13 -0.11 -0.93 -0.09 -2.28 -0.23 0.24 0.06 0.29 -1.39 -1.69 -3.38 0.59 0.24 -1.29 0.21 0.16 0.44 0.24 0.38 -0.13 -0.06
0.22 0.06 -0.01 0.05 0.22 0.13 0.06 -0.0 0.32 0.2 0.3 0.09 -0.13 -0.95 -1.66 -0.09 0.56 0.48 0.59 -2.59 -2.16 -3.59 0.4 0.07 -1.88 0.18 0.09 0.29 0.61 0.69 0.03 0.04
0.85 0.62 0.59 0.52 0.38 0.53 -0.24 -0.11 0.29 0.13 0.21 0.07 -4.02 -2.66 -3.21 -3.71 1.16 0.73 0.94 -4.03 -1.74 -7.6 -0.78 -0.64 0.55 -0.11 0.35 0.55 0.32 0.4 -0.64 -0.85
0.43 0.6 0.57 0.46 0.14 0.02 0.5 0.67 0.65 0.78 0.69 0.56 -5.42 -4.53 -4.68 -1.92 0.01 -0.43 0.07 -7.01 -4.32 -7.1 0.59 0.46 -1.95 0.16 -0.06 0.56 0.57 0.57 -0.01 -0.18
0.14 0.01 0.23 0.25 0.25 0.41 0.84 0.67 0.73 0.58 0.51 0.47 -1.92 -1.21 -1.06 -1.82 0.58 0.62 -0.92 -1.56 -1.48 -2.53 -0.55 -0.75 -0.95 -0.66 0.46 0.63 0.49 0.4 -0.03 -0.46
0.42 0.42 0.35 0.19 0.23 0.29 0.28 0.26 0.36 0.26 0.36 0.36 -1.49 -1.92 -2.46 -1.34 0.63 0.76 -0.34 -3.38 -0.92 -1.46 -0.16 -0.66 -1.16 -0.06 0.6 0.6 0.5 0.33 0.15 0.12
-0.47 -0.06 -0.0 0.16 0.08 0.05 0.42 -0.07 0.08 -0.29 -0.3 -0.43 -0.31 -0.3 0.12 0.15 0.28 0.04 0.03 0.22 0.21 -0.59 0.02 -0.1 0.32 -0.55 0.41 0.48 0.24 0.26 -0.4 -0.8
0.78 0.7 0.82 0.64 0.62 0.59 0.56 0.54 0.26 0.05 0.34 0.6 -6.58 -5.26 -7.85 -5.1 1.03 0.34 -2.03 -2.79 0.34 -4.69 -0.34 -2.0 -0.73 -1.78 0.19 0.31 0.58 0.44 0.32 -0.21
0.46 0.53 0.47 0.41 0.49 0.56 0.32 0.26 -0.01 -0.18 -0.13 -0.19 -0.43 -0.2 -0.05 -0.11 0.18 -0.02 0.42 -2.84 -0.64 -3.05 0.0 -0.14 -0.66 -0.2 0.57 0.58 0.03 0.11 -0.85 -0.8
0.18 0.05 0.2 0.24 0.31 0.36 0.65 -0.2 0.3 -0.09 0.12 -0.15 -2.41 -3.49 -3.58 -2.23 1.39 0.86 0.42 -4.64 -2.21 -5.05 0.94 0.17 -1.26 -2.5 -0.87 -0.57 1.19 1.23 0.29 0.04
-0.24 0.05 0.27 0.49 0.69 0.76 0.53 0.42 0.19 0.14 -0.04 -0.15 -1.03 -0.8 -1.17 -0.84 0.15 -0.64 -0.51 -0.32 -1.63 -3.35 0.44 0.34 0.09 -0.4 0.66 0.64 -0.21 -0.18 0.13 0.21

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.