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Heatmap: Cluster_168 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.76 0.87 0.49 0.21 0.54 0.83 1.29 1.95 1.75 2.31 1.19 1.62 0.11 0.16 0.02 0.08 0.75 0.36 0.46 1.11 0.71 0.0 0.57 0.26 2.37 2.97 1.24 0.6 1.4 0.99 1.56 0.38
19.77 12.15 14.04 14.87 17.26 20.39 18.81 21.84 23.09 21.21 23.21 16.42 10.48 9.26 14.97 14.3 18.59 18.92 18.08 2.65 7.95 1.0 21.48 24.38 3.39 10.36 12.49 11.16 19.5 22.1 28.93 28.19
3.78 3.29 4.09 3.3 4.04 6.53 7.32 7.34 6.65 6.29 5.85 5.17 3.14 7.52 4.46 3.06 4.3 4.46 3.73 6.05 4.33 2.52 3.31 2.86 2.58 4.48 3.33 4.4 5.44 4.46 5.92 6.67
112.6 128.98 155.35 162.94 167.67 169.71 186.99 194.07 209.74 186.84 161.02 153.64 26.46 19.27 13.18 33.49 137.17 98.04 77.54 38.91 126.91 21.72 77.72 60.89 101.45 254.92 158.43 192.16 153.02 142.24 523.18 298.38
12.47 6.93 9.2 6.0 6.01 3.5 6.61 6.59 6.45 8.51 7.59 9.65 2.83 2.42 0.5 11.46 5.91 10.35 22.14 0.0 1.01 0.46 5.93 9.38 0.79 5.61 6.79 7.69 11.11 12.26 18.55 15.34
14.99 16.37 7.85 6.54 5.83 5.89 6.73 10.28 9.64 13.53 12.0 18.51 16.08 2.38 1.49 14.02 6.45 11.95 14.63 0.0 4.33 0.15 6.9 7.57 1.37 8.64 6.85 3.88 14.18 11.75 13.9 9.23
26.64 46.49 45.12 44.15 30.23 20.39 47.32 45.07 45.68 48.75 45.9 54.5 18.6 40.27 16.47 26.95 13.88 19.0 24.62 7.4 20.28 6.18 13.62 13.76 13.34 47.87 28.62 15.01 37.89 37.24 74.76 79.63
3.56 4.86 6.06 5.55 7.11 6.62 9.2 11.72 10.8 9.86 6.94 5.54 0.2 0.15 0.03 0.78 4.93 4.39 3.68 0.23 7.72 0.12 5.49 2.59 5.66 7.22 6.94 5.35 6.51 4.72 6.28 3.65
90.43 194.7 193.59 186.53 155.57 123.12 158.35 168.37 172.12 171.89 148.54 127.65 124.09 118.75 45.64 165.22 93.97 53.56 110.75 6.61 75.92 3.23 117.91 96.53 177.89 211.21 147.31 99.41 97.53 80.61 222.54 227.22
119.61 109.99 120.29 138.84 128.4 123.69 134.03 168.92 167.92 191.46 176.35 172.55 165.61 111.86 60.46 126.03 125.04 217.59 133.57 17.45 95.72 49.8 170.86 177.29 153.99 120.51 108.57 105.64 155.72 152.82 113.75 128.94
38.12 20.09 19.21 18.54 18.6 20.37 23.17 19.97 25.23 26.36 26.95 25.78 13.53 15.52 11.85 18.67 23.86 15.65 32.94 9.94 6.94 5.19 17.39 17.14 5.49 11.95 14.19 15.09 26.38 36.59 60.5 63.34
51.29 49.41 46.24 41.8 43.92 46.07 44.77 41.59 41.67 41.66 44.85 49.84 26.44 24.44 7.65 53.13 48.55 43.62 44.98 2.76 35.34 3.17 54.07 57.72 50.23 16.73 23.34 27.13 51.47 48.79 25.82 17.59
11.33 19.34 23.7 24.89 13.48 15.68 23.23 21.84 26.7 29.38 19.29 22.68 17.47 16.09 10.61 7.41 11.37 10.92 10.83 8.02 13.54 4.24 8.37 8.02 8.4 10.81 5.86 5.7 12.94 11.22 52.4 45.75
53.57 47.96 61.72 60.41 71.55 57.63 70.18 90.61 84.13 69.96 72.47 56.13 46.92 17.07 14.74 78.37 64.7 74.73 69.6 8.08 9.5 17.25 64.73 59.95 33.73 83.74 35.63 35.54 88.68 77.5 102.3 111.77
3.87 3.85 2.73 2.27 4.98 6.58 10.73 10.93 10.98 12.26 12.44 7.99 3.07 4.85 2.14 2.86 3.65 6.21 8.86 0.34 9.09 2.78 4.57 4.99 2.76 6.56 4.65 2.77 9.57 7.67 39.89 28.67
8.15 12.59 12.46 11.59 9.84 13.47 17.57 22.48 21.95 21.31 21.49 14.5 1.18 0.16 0.1 2.23 8.99 14.3 14.96 4.67 24.42 0.08 14.12 11.1 23.83 20.42 12.24 8.13 18.99 11.94 21.62 17.9
84.03 70.35 66.45 58.73 57.68 48.51 55.32 67.99 88.64 97.41 99.06 91.25 20.06 14.13 18.99 24.98 36.03 38.77 43.34 7.86 41.62 22.56 33.66 40.18 21.72 71.78 33.35 32.98 42.09 43.34 122.23 123.51
18.32 16.03 14.0 12.04 14.8 19.27 16.04 18.74 14.93 14.56 14.71 13.65 13.27 7.59 10.62 18.29 14.87 16.28 21.44 0.14 6.33 0.2 13.65 12.38 12.37 26.2 17.19 22.96 14.71 13.86 20.92 21.79
3.11 4.59 3.57 4.76 5.53 6.27 8.87 9.31 9.65 10.18 7.85 7.42 1.6 3.11 0.33 2.69 2.37 2.72 3.37 0.12 0.0 0.49 4.32 4.96 3.78 14.97 5.44 2.87 6.45 6.17 6.94 6.04
3.27 2.64 2.24 3.1 2.45 3.25 6.34 8.54 9.38 12.2 7.46 7.91 3.03 7.88 2.67 4.56 0.9 3.71 6.21 3.43 0.78 0.57 0.54 0.99 1.94 7.95 1.86 1.48 2.89 2.39 6.48 6.64
10.04 8.65 7.86 9.55 9.98 9.94 10.17 11.16 9.97 9.73 10.64 9.45 9.37 4.12 4.08 8.19 9.52 6.76 16.45 2.24 2.18 2.37 9.46 8.11 2.68 7.87 6.33 7.86 9.52 11.06 13.05 12.89
19.16 17.72 18.0 20.91 18.32 17.12 23.72 25.95 31.38 30.58 29.93 26.56 22.98 20.03 6.61 25.27 27.25 16.85 23.83 11.12 6.02 1.42 29.29 28.03 9.59 29.73 22.18 22.55 26.26 28.74 44.16 49.19
3.16 2.77 4.21 4.21 4.25 5.14 6.14 8.61 7.76 9.7 7.93 6.62 2.11 4.42 0.58 3.43 2.79 3.25 4.66 1.77 6.02 1.95 5.19 5.21 7.37 15.64 8.82 5.66 9.53 8.23 11.44 9.0
3.76 7.16 10.51 9.71 8.76 8.12 12.32 12.53 13.9 13.62 12.31 10.22 6.55 1.25 3.65 5.83 5.45 4.44 8.6 5.48 15.99 5.96 7.54 7.96 7.73 18.28 4.21 4.7 8.38 9.38 7.46 8.55
23.35 21.83 23.29 20.35 18.63 21.9 21.2 31.29 34.79 35.01 31.26 34.18 8.53 12.39 11.14 7.92 11.85 17.2 8.48 6.31 13.91 3.74 14.44 16.37 5.24 19.57 18.97 15.62 10.86 9.94 24.81 30.37
5.25 3.52 4.13 4.48 3.34 4.55 4.12 4.5 5.33 8.94 7.45 7.36 3.31 1.37 3.34 5.06 6.11 7.2 5.61 0.32 0.58 2.06 6.25 5.92 1.79 2.02 1.79 3.06 5.92 6.19 6.59 8.33
4.26 7.62 4.88 3.17 7.62 0.08 6.88 8.42 8.61 9.47 5.48 4.99 8.06 0.0 0.0 5.76 4.74 1.44 6.35 0.0 0.0 0.0 7.56 5.48 0.68 0.0 0.0 0.0 6.0 6.13 9.5 8.93
65.77 40.43 30.11 29.9 25.86 28.5 35.32 44.92 53.57 63.92 58.49 67.79 20.96 33.18 16.18 26.38 22.66 12.51 33.72 7.22 33.72 6.26 30.0 37.8 60.36 29.63 32.92 36.25 32.56 38.02 82.98 60.99
10.48 8.99 5.72 4.6 3.88 8.79 10.27 22.09 15.41 22.61 18.95 21.06 0.68 1.31 1.61 4.12 7.84 2.34 17.76 23.87 13.94 9.06 6.9 9.46 13.12 58.64 37.71 16.65 34.71 27.38 37.52 24.63
28.2 31.46 45.35 30.43 28.82 29.67 45.51 53.27 54.28 69.01 56.38 60.55 35.15 3.81 7.11 22.77 26.29 45.03 45.88 9.03 49.26 0.0 56.03 67.99 13.61 50.03 18.68 24.95 55.03 51.57 35.96 34.11
35.64 34.5 36.59 36.38 35.48 40.97 42.97 44.41 49.27 53.33 47.31 43.6 23.11 20.04 20.06 22.12 45.96 49.57 24.7 38.88 36.13 17.84 35.72 34.38 27.29 38.55 45.51 44.43 44.52 45.35 60.53 60.31
2.88 5.98 7.42 6.56 5.21 4.65 8.63 11.09 8.67 10.74 7.83 7.37 12.34 2.59 1.6 5.83 2.96 1.57 5.39 2.74 10.73 0.52 5.67 5.38 8.6 12.35 4.56 4.38 5.79 4.45 9.15 14.07
11.4 21.66 26.5 35.52 17.43 12.71 52.12 48.14 42.05 58.45 32.99 32.29 12.42 64.69 13.98 18.65 4.97 31.43 16.77 44.57 14.35 0.05 3.36 3.22 21.72 36.59 17.21 7.38 10.18 8.74 40.84 41.78
0.26 0.09 0.04 0.06 0.24 0.57 0.81 0.89 0.59 0.79 0.82 0.5 0.08 0.03 0.11 0.25 0.23 0.25 0.4 0.0 0.07 0.12 0.25 0.32 0.74 1.59 0.7 0.74 0.41 0.43 0.75 0.56
3.57 4.72 7.52 6.68 6.28 7.66 14.27 14.05 17.91 17.05 13.98 13.09 2.3 0.34 0.82 2.64 6.43 12.72 5.62 0.7 9.67 0.91 9.36 6.98 5.1 17.56 11.44 10.03 12.91 11.28 17.8 23.83
1.28 1.65 1.19 1.39 0.77 1.29 1.23 1.88 2.32 2.38 1.18 1.4 0.0 0.03 0.0 0.0 1.04 0.88 0.42 0.07 1.91 0.0 0.71 0.64 1.38 2.85 1.98 2.31 0.99 1.35 1.67 1.59
1.69 9.11 11.13 5.98 8.51 4.11 10.65 7.36 7.51 7.7 8.63 6.26 3.26 0.12 0.02 2.83 5.39 2.29 3.4 0.0 0.0 0.0 8.37 8.17 0.22 8.46 2.87 3.72 7.97 5.61 14.82 17.64
43.99 53.24 59.35 66.98 50.77 51.84 96.24 97.31 78.93 95.77 69.61 65.33 63.46 91.55 61.16 58.23 20.19 33.42 46.24 50.18 78.99 8.17 50.03 59.04 101.37 60.14 31.37 23.69 39.68 40.66 171.31 129.42
12.92 33.86 72.78 129.07 97.92 86.43 193.09 112.49 82.23 66.12 47.14 33.51 33.85 62.22 14.08 43.52 45.4 34.04 60.9 32.73 70.44 11.97 80.21 70.13 79.24 81.76 72.37 69.25 62.17 77.95 127.22 143.47
32.96 21.64 19.75 21.73 21.12 21.43 25.47 25.43 27.9 28.17 31.79 29.35 13.82 13.29 6.29 21.17 14.14 11.02 53.68 0.56 3.69 0.59 17.56 21.12 4.48 29.25 22.91 22.56 19.09 19.85 58.68 45.82
234.64 229.01 195.82 189.04 190.76 226.22 207.08 255.96 260.31 304.69 256.51 274.34 203.64 134.12 100.09 183.11 214.54 265.39 197.72 41.76 192.56 83.22 282.36 282.16 231.17 108.02 84.03 85.15 244.84 235.05 209.94 248.32
6.17 9.09 11.53 10.46 11.01 9.92 17.81 18.3 15.08 15.71 14.71 11.96 5.45 7.93 7.3 5.74 10.18 4.64 5.42 1.27 5.19 0.4 17.38 10.34 9.52 11.27 11.48 13.44 11.83 11.94 7.18 9.33
9.7 12.17 5.31 4.02 3.8 3.37 3.65 5.65 6.96 8.26 10.27 12.37 0.74 0.3 0.32 2.18 3.44 9.08 7.97 0.0 0.59 0.06 3.52 3.98 1.82 12.86 9.31 11.14 10.02 8.48 8.33 5.6
44.25 46.66 57.41 59.56 67.57 65.19 69.75 72.54 65.88 61.86 56.98 50.28 24.43 18.73 33.68 32.74 49.5 33.43 50.11 15.0 56.99 6.55 41.64 31.27 34.16 51.3 58.58 56.25 54.24 51.7 45.57 47.33
38.02 154.91 160.49 144.13 108.78 68.22 153.51 142.07 146.8 179.7 131.24 138.27 38.96 17.61 4.47 44.57 85.55 49.47 55.81 22.07 165.35 1.12 131.88 119.93 201.5 149.11 68.24 54.64 114.02 83.4 190.29 226.09
16.38 5.37 3.63 3.49 7.36 1.92 4.11 4.72 7.71 12.74 8.63 12.86 6.77 4.23 0.32 5.91 4.13 7.18 12.78 0.0 0.0 0.0 4.3 4.62 0.2 6.46 4.75 3.32 13.75 10.62 16.63 12.9
96.39 86.73 81.46 79.83 81.9 75.28 117.89 125.08 142.33 156.71 151.76 162.39 71.12 63.47 59.63 91.48 67.56 82.08 149.99 0.92 0.84 1.98 80.08 84.34 0.99 92.24 71.17 61.43 154.37 170.66 210.23 249.11
34.32 38.32 37.97 40.15 38.69 34.59 37.91 51.98 46.13 42.76 47.28 43.39 53.09 20.95 23.75 52.66 50.66 48.17 45.67 2.55 10.13 0.0 39.54 33.45 11.48 101.96 54.29 55.14 51.96 45.0 81.63 99.75
60.54 46.14 50.05 47.68 59.13 61.59 67.28 88.1 93.95 73.57 83.57 61.93 30.25 19.89 16.24 39.65 68.31 57.88 45.55 48.0 87.37 27.84 59.0 52.66 54.46 92.02 71.46 75.39 69.24 72.35 101.89 75.65
57.45 62.67 87.28 93.7 89.42 76.48 110.18 119.17 119.48 129.59 137.11 102.7 69.84 38.03 42.16 68.98 98.52 75.85 81.53 64.67 125.98 80.12 91.18 104.11 152.81 180.8 71.24 79.79 113.2 103.12 113.37 119.82
34.18 21.5 28.32 23.92 16.89 18.69 28.54 33.3 42.48 42.53 51.42 48.36 10.41 10.97 52.84 10.57 36.4 24.26 27.32 1.57 4.26 32.78 29.56 24.12 18.54 137.94 28.04 26.09 65.59 52.84 163.45 146.25
18.49 21.83 19.02 17.4 11.32 10.68 16.27 19.59 24.39 30.73 35.67 44.34 17.79 16.93 32.78 19.74 22.14 22.14 23.09 6.11 10.94 16.66 21.57 23.44 16.79 18.32 16.12 21.01 29.19 27.24 33.55 40.35
30.28 24.04 19.84 25.76 19.54 20.86 26.29 24.47 22.98 25.36 26.84 22.04 28.47 15.81 5.12 14.86 20.54 19.56 16.49 15.14 21.44 0.69 20.7 20.12 14.77 10.31 13.7 10.54 16.97 14.16 76.92 89.02
9.47 8.33 7.16 6.26 6.23 11.18 11.65 13.84 9.31 13.83 12.56 11.08 9.87 7.37 6.24 12.59 9.38 7.37 9.86 0.84 0.67 0.0 9.9 10.68 1.21 6.34 5.26 3.43 11.93 13.08 14.97 16.33
6.61 6.95 2.57 7.25 10.86 8.5 12.57 8.74 9.76 8.45 7.41 7.12 6.03 1.88 4.75 6.56 9.15 9.16 8.78 0.0 3.7 0.27 7.6 5.41 0.76 1.71 2.07 5.17 11.61 9.83 11.16 9.89
79.2 43.1 30.91 27.54 26.22 30.95 32.47 47.77 55.18 64.5 68.26 73.17 16.27 18.63 17.04 18.0 16.98 24.14 22.91 7.44 14.52 4.56 22.05 22.11 11.12 14.7 19.44 16.7 36.06 34.42 100.72 61.39
21.07 16.95 15.63 14.29 13.95 15.46 14.81 18.17 16.04 17.43 15.41 19.45 3.75 5.21 9.45 5.19 7.34 4.07 8.98 0.52 4.46 5.43 8.53 9.03 5.41 11.44 11.89 13.58 9.37 10.07 41.96 22.22
6.42 6.49 7.52 7.62 9.11 9.94 17.28 19.06 17.83 16.16 16.35 11.57 5.97 2.21 3.75 5.26 7.91 8.75 7.47 0.39 10.81 0.98 11.48 11.74 6.63 10.99 10.31 10.12 13.89 13.84 12.17 13.16
15.02 13.81 19.08 22.4 26.1 25.13 29.6 40.65 40.84 36.59 35.79 32.46 14.3 23.61 29.78 22.86 21.93 14.46 21.26 23.04 38.2 17.3 21.23 18.55 36.41 50.5 25.02 25.43 30.99 32.38 14.16 9.27
37.83 27.53 18.11 30.8 33.74 22.55 24.22 34.39 27.11 51.79 61.59 76.08 26.28 9.47 15.73 34.64 19.1 40.78 55.91 0.0 0.0 0.0 24.11 20.27 0.0 23.24 20.83 18.4 63.32 58.73 56.02 87.68
501.47 342.15 313.26 306.44 290.35 257.23 515.05 550.53 928.49 876.13 902.0 696.44 14.76 301.41 284.34 45.46 584.14 291.1 207.63 15.85 45.48 26.03 237.52 187.72 56.76 554.8 131.13 133.69 491.21 482.02 816.55 1291.48
72.6 74.65 78.78 63.93 60.62 56.64 71.73 62.73 91.79 119.35 117.76 126.18 76.9 39.2 27.74 49.42 82.41 85.51 17.52 0.63 30.53 14.17 60.06 60.68 41.15 9.25 8.44 9.71 79.11 74.69 38.75 26.46
9.03 8.08 7.09 7.18 6.67 9.2 13.23 14.31 15.33 15.37 14.63 12.03 4.15 2.38 4.62 8.48 11.94 7.91 14.99 2.06 3.39 2.96 12.96 12.48 2.26 13.3 10.92 6.31 16.4 15.27 18.68 22.62
67.74 37.83 40.48 39.57 31.1 37.55 39.18 40.02 34.97 34.63 45.33 33.9 56.86 27.44 6.14 55.76 43.41 0.78 40.21 0.0 0.0 0.0 27.59 11.68 0.0 24.15 18.61 14.64 55.76 43.77 71.17 62.58
53.86 39.02 41.89 48.33 36.02 30.65 37.47 53.38 63.27 63.07 69.96 57.27 27.33 53.05 31.25 42.68 21.96 29.21 62.89 18.09 50.51 14.99 34.42 38.83 75.41 66.12 23.0 14.72 35.96 35.7 134.42 119.82
2.2 1.26 3.11 2.1 1.63 3.46 3.59 5.74 5.37 5.73 3.99 3.73 0.96 0.52 2.36 1.69 2.95 2.97 2.25 0.0 0.0 0.0 2.68 2.11 0.0 2.64 3.34 3.43 3.75 3.95 4.09 3.86
3.43 2.75 2.45 3.71 3.7 7.77 9.63 12.42 11.44 10.13 8.33 5.93 1.9 0.84 1.97 2.54 6.9 9.68 5.1 0.11 4.17 0.0 6.45 4.6 1.41 1.66 6.11 2.49 8.42 8.77 9.13 6.34
60.66 42.91 37.96 40.74 34.57 31.29 46.38 47.71 68.87 75.52 71.64 75.23 19.4 31.57 19.41 25.33 29.82 8.48 46.8 3.41 26.88 1.44 42.97 47.94 38.47 59.88 51.6 48.64 47.57 50.85 164.92 114.02
34.99 25.02 20.01 21.21 20.56 23.17 26.6 29.82 29.08 30.23 30.59 30.86 13.58 15.45 8.47 19.87 15.05 13.06 29.5 0.61 0.33 0.0 17.27 20.39 7.88 41.73 34.66 32.79 20.42 22.08 64.03 49.82
57.26 55.22 58.69 61.52 65.3 53.89 62.78 72.34 71.63 72.21 71.03 60.36 47.33 42.03 42.14 53.83 29.5 18.32 60.9 10.7 5.21 6.72 38.55 41.5 7.89 89.05 76.43 70.07 38.84 41.88 151.77 157.94

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)