Heatmap: Cluster_175 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00024160 (evm_27.TU.AmTr_v1.0_scaffold00001.8)
0.51 0.24 0.77 -2.83 -0.2 -2.38 -2.37 -3.16 -1.55 -1.65 -0.68 -0.41 -0.32 -0.01 -0.5 -0.52 -1.27 1.11 0.42 1.28 2.07 -1.31
AMTR_s00001p00181860 (evm_27.TU.AmTr_v1.0_scaffold00001.175)
-4.63 -3.99 -2.61 -2.6 -4.77 -8.48 -10.38 -11.64 -11.36 -13.03 0.36 0.58 -1.63 -1.49 -0.44 1.04 -1.64 1.91 1.5 1.37 2.52 -4.87
AMTR_s00001p00272240 (evm_27.TU.AmTr_v1.0_scaffold00001.508)
- - - - -0.48 - - - - - - - -2.29 - - - - - 2.77 1.1 3.6 -
AMTR_s00002p00041060 (evm_27.TU.AmTr_v1.0_scaffold00002.15)
- - - - -2.75 - -6.1 - -5.24 -5.95 -2.45 -3.39 -2.09 0.44 -3.0 -1.96 -5.38 1.86 0.54 2.52 2.27 1.95
AMTR_s00003p00092110 (evm_27.TU.AmTr_v1.0_scaffold00003.55)
-9.85 -9.69 -0.66 - -5.88 - -7.15 - -5.99 -5.99 -3.65 -1.26 -4.34 -4.04 -4.13 -2.25 -4.38 1.56 1.46 3.35 2.15 -3.86
AMTR_s00005p00228760 (evm_27.TU.AmTr_v1.0_scaffold00005.104)
-1.2 - - - -2.55 - -4.65 - - - 1.01 2.39 0.05 -0.83 -0.04 - -2.33 1.2 1.48 2.06 1.04 -
AMTR_s00005p00228790 (evm_27.TU.AmTr_v1.0_scaffold00005.105)
- - - - - - - - - - 1.2 - -1.5 -1.91 -1.31 - 1.0 - - 2.08 3.64 -
AMTR_s00005p00245880 (evm_27.TU.AmTr_v1.0_scaffold00005.143)
- - -3.89 - -4.28 - -5.51 - -4.51 -3.17 0.78 2.78 -2.81 -5.4 -4.94 -0.55 -1.33 1.69 1.35 2.21 0.46 -3.78
AMTR_s00005p00257660 (evm_27.TU.AmTr_v1.0_scaffold00005.181)
- - - - 2.47 - - - - - - - - -1.09 - - 1.96 - - - 3.6 -
AMTR_s00008p00074000 (evm_27.TU.AmTr_v1.0_scaffold00008.27)
- - - - - - - - -2.84 -2.08 - - -0.51 -2.61 0.09 - - - - 2.28 3.78 0.16
AMTR_s00009p00140590 (evm_27.TU.AmTr_v1.0_scaffold00009.82)
1.69 - - - 3.09 - - - - - - - 0.98 -0.63 1.29 - - - - 2.38 - -
AMTR_s00009p00164890 (evm_27.TU.AmTr_v1.0_scaffold00009.95)
- - - - 4.27 - - - - - - - - - 1.42 - - - - - - -
AMTR_s00009p00233140 (evm_27.TU.AmTr_v1.0_scaffold00009.188)
-1.52 - - - -4.89 - -9.04 - -9.39 - -0.13 -0.92 -2.33 -4.14 -2.72 -1.99 -2.45 2.3 2.14 2.41 2.21 -3.63
AMTR_s00009p00260830 (evm_27.TU.AmTr_v1.0_scaffold00009.325)
- - - - -3.09 - -3.21 - -3.56 -3.57 0.03 -1.54 1.22 -1.58 -2.61 -0.09 0.8 - -1.88 3.08 2.51 -1.75
AMTR_s00010p00244540 (evm_27.TU.AmTr_v1.0_scaffold00010.321)
- - - - -0.1 - - - - - - - - - - - - - - 2.39 3.98 -
AMTR_s00011p00201790 (evm_27.TU.AmTr_v1.0_scaffold00011.69)
- - - - -2.89 - -3.31 -10.73 -3.75 -3.12 -1.68 -1.65 -3.1 -0.1 -3.52 -0.53 -0.75 2.3 1.43 0.51 3.14 -0.64
AMTR_s00012p00254580 (evm_27.TU.AmTr_v1.0_scaffold00012.279)
- - - -1.6 -0.85 - - - - - -0.47 - -0.66 -2.95 - - 0.97 - 1.64 3.49 - 1.72
AMTR_s00014p00241930 (evm_27.TU.AmTr_v1.0_scaffold00014.112)
- - - - -1.71 - - - - - 0.89 0.67 0.66 -2.12 -1.9 -2.77 0.72 0.73 -0.22 2.56 1.85 1.23
AMTR_s00016p00247790 (evm_27.TU.AmTr_v1.0_scaffold00016.284)
- - - - -5.41 - -6.76 - -5.38 -6.57 -0.36 -1.85 -2.27 -1.74 0.2 -0.83 -5.51 0.22 1.36 3.73 0.58 -3.2
AMTR_s00016p00248980 (evm_27.TU.AmTr_v1.0_scaffold00016.291)
- - - - -0.12 - -5.46 - -5.7 -5.54 -2.61 - -2.18 1.11 -1.18 - 0.25 2.12 2.73 2.13 0.53 -5.75
AMTR_s00017p00219220 (evm_27.TU.AmTr_v1.0_scaffold00017.166)
- - - - -2.16 - - - - - 0.27 - 0.77 - -3.9 - - 2.42 - 3.11 2.27 -
AMTR_s00018p00061120 (evm_27.TU.AmTr_v1.0_scaffold00018.18)
- - - -2.01 -1.69 - - - -5.1 -5.04 -2.22 - -1.22 0.48 -1.87 -1.0 -1.42 1.37 1.93 3.17 0.8 0.06
AMTR_s00019p00182440 (evm_27.TU.AmTr_v1.0_scaffold00019.193)
- - - - -1.9 - -9.05 - -8.43 - -1.61 -2.8 1.3 -0.25 0.68 -3.36 -1.05 -1.11 0.63 2.91 2.6 -2.67
AMTR_s00019p00182630 (evm_27.TU.AmTr_v1.0_scaffold00019.194)
- -4.08 -0.02 - -3.98 - -7.39 - -6.31 -6.28 -2.42 -1.97 0.23 -0.31 0.63 -2.11 -0.54 -0.86 -0.52 2.62 3.08 -3.17
AMTR_s00021p00236420 (evm_27.TU.AmTr_v1.0_scaffold00021.240)
- - - - 1.61 - -2.71 - -0.32 -0.55 1.95 2.17 1.56 -2.91 -1.0 - 1.19 - - -1.91 - 1.48
AMTR_s00022p00199830 (evm_27.TU.AmTr_v1.0_scaffold00022.231)
- -0.9 - - -3.52 - -6.76 1.71 -2.32 -1.45 -0.03 -3.02 -0.42 1.14 -1.0 -1.85 1.05 -0.55 -0.09 1.51 2.35 0.09
AMTR_s00027p00247590 (evm_27.TU.AmTr_v1.0_scaffold00027.158)
- - - - 1.89 - 1.99 - 2.71 1.49 - - 0.65 0.96 0.51 - - - - - - -
AMTR_s00029p00151630 (evm_27.TU.AmTr_v1.0_scaffold00029.179)
- - - - 1.72 - -5.2 - -5.02 -4.83 - -0.56 0.25 - -3.51 -1.12 - 1.25 1.3 2.07 2.68 -0.43
AMTR_s00029p00170760 (evm_27.TU.AmTr_v1.0_scaffold00029.229)
- -20.18 - - -1.79 - -5.24 - - -3.9 1.48 -0.54 -5.22 -1.54 - 3.74 -2.68 - -21.18 0.98 0.91 -1.43
AMTR_s00029p00175900 (evm_27.TU.AmTr_v1.0_scaffold00029.234)
- - - - - - - - -0.67 -0.51 - - - 2.05 0.4 - - - - 3.55 - 1.81
AMTR_s00029p00197310 (evm_27.TU.AmTr_v1.0_scaffold00029.269)
- - - - -4.84 -1.79 -7.9 - -9.12 -10.13 -2.04 1.0 -0.18 3.08 -3.1 -1.24 -5.02 -0.34 0.48 2.65 -0.52 -1.56
AMTR_s00032p00218950 (evm_27.TU.AmTr_v1.0_scaffold00032.220)
- - - - 1.34 - - - - - - - - - - - - - - -0.39 4.23 -
AMTR_s00033p00171210 (evm_27.TU.AmTr_v1.0_scaffold00033.118)
- - -8.84 - - - - - - - -4.24 -6.04 -5.02 -8.26 -6.43 -6.61 -2.96 2.34 0.76 2.96 2.85 -6.32
AMTR_s00033p00193860 (evm_27.TU.AmTr_v1.0_scaffold00033.151)
- -0.37 -6.64 -7.44 -5.16 -3.08 -9.77 -9.5 -7.7 -6.94 -0.94 -1.35 -1.53 -2.67 -3.47 2.67 -0.84 0.97 1.43 1.4 1.87 0.76
AMTR_s00037p00025630 (evm_27.TU.AmTr_v1.0_scaffold00037.6)
- - - - -5.52 - -8.23 - -8.78 -9.14 -3.47 -2.89 -4.33 -10.41 -6.87 - -5.63 2.23 0.89 2.57 3.14 -1.34
AMTR_s00040p00125130 (evm_27.TU.AmTr_v1.0_scaffold00040.91)
- - - - 0.1 - -1.38 - -1.75 -0.29 - - - - -2.16 1.81 1.46 0.6 1.08 1.82 2.44 -1.4
AMTR_s00045p00167420 (evm_27.TU.AmTr_v1.0_scaffold00045.193)
- 2.63 - - -0.7 - -7.31 -5.64 -3.63 -3.74 -3.73 -1.97 -2.35 -3.07 -2.49 -0.21 -5.11 -3.16 1.1 1.97 2.62 0.02
AMTR_s00045p00232240 (evm_27.TU.AmTr_v1.0_scaffold00045.340)
- - - - -0.82 - -5.71 - -5.42 -8.38 -2.1 -3.36 0.24 -3.58 -1.66 -0.6 -0.7 0.7 1.73 1.4 3.4 -4.85
AMTR_s00046p00173940 (evm_27.TU.AmTr_v1.0_scaffold00046.97)
- - - - -4.16 - -10.17 - -7.41 -8.78 -7.5 - -7.61 -9.02 -4.17 -6.28 -7.86 1.81 2.15 2.67 2.91 -8.28
AMTR_s00046p00193250 (evm_27.TU.AmTr_v1.0_scaffold00046.117)
- - - - - - - - - - - - - - - - - - - 4.46 - -
AMTR_s00053p00181850 (evm_27.TU.AmTr_v1.0_scaffold00053.129)
- - - -6.58 -0.99 - -7.38 - -7.21 - -1.32 0.1 0.66 -0.42 -0.58 -0.95 -1.13 1.01 0.61 2.64 1.99 1.2
AMTR_s00057p00176460 (evm_27.TU.AmTr_v1.0_scaffold00057.186)
- - - - -3.12 - - - - - -2.3 -1.26 -5.12 -5.26 -4.02 - -3.98 1.35 1.66 3.89 -0.87 -6.91
AMTR_s00058p00190530 (evm_27.TU.AmTr_v1.0_scaffold00058.189)
- - - - - - 1.34 - - - - - - - 0.73 - - - - 3.31 - 2.99
AMTR_s00060p00080800 (evm_27.TU.AmTr_v1.0_scaffold00060.30)
- - - - - - -6.98 - - - - - -3.87 -3.67 -2.2 -3.45 - 0.93 3.19 3.31 -1.64 -2.04
AMTR_s00061p00200560 (evm_27.TU.AmTr_v1.0_scaffold00061.242)
-2.72 0.4 - -4.68 -3.96 -2.34 -2.09 - -2.73 -3.1 -0.83 -2.11 0.8 -0.82 -2.69 -0.33 -1.55 1.89 0.97 1.74 2.65 -3.67
AMTR_s00065p00113250 (evm_27.TU.AmTr_v1.0_scaffold00065.65)
0.73 0.83 1.24 -1.76 -0.22 -1.02 -0.1 0.77 0.88 0.48 -0.97 -0.67 -0.13 0.85 -0.02 0.58 -3.06 -0.44 -0.82 -0.98 -2.13 -2.49
AMTR_s00066p00056580 (evm_27.TU.AmTr_v1.0_scaffold00066.30)
- - - -2.52 -1.13 - -4.29 - -4.01 -4.05 0.06 0.69 0.0 -0.08 -0.3 -1.14 -2.7 1.37 1.4 2.02 2.49 -1.89
AMTR_s00066p00064850 (evm_27.TU.AmTr_v1.0_scaffold00066.43)
- - - - - - - - 3.11 2.75 - - -0.67 - -1.46 - - - - 0.13 - 2.18
AMTR_s00069p00175260 (evm_27.TU.AmTr_v1.0_scaffold00069.155)
- - - - -3.43 - -10.47 - -12.08 -11.45 -0.29 1.09 1.8 -0.83 0.37 0.41 -0.02 1.55 1.57 1.91 0.31 -1.27
AMTR_s00072p00021800 (evm_27.TU.AmTr_v1.0_scaffold00072.3)
- - - - 0.42 - - - - 0.19 - - 0.41 - 0.69 - - - - 3.65 - 2.02
AMTR_s00080p00039920 (evm_27.TU.AmTr_v1.0_scaffold00080.8)
1.0 - -0.23 -3.54 -3.36 - -6.96 - -8.24 -7.41 0.07 0.39 -1.18 -3.55 -1.89 -0.15 1.35 0.43 -0.37 1.44 2.83 -1.27
AMTR_s00085p00101970 (evm_27.TU.AmTr_v1.0_scaffold00085.61)
- - - - -3.29 - - - - - -1.32 - 0.49 -4.76 -4.51 - 2.81 - 2.28 -0.22 2.7 -0.31
AMTR_s00088p00083140 (evm_27.TU.AmTr_v1.0_scaffold00088.49)
- - - - -0.3 -5.11 -7.74 -10.2 -10.41 -9.95 -4.1 -3.39 0.19 1.59 2.43 -6.76 -8.25 -1.53 1.54 0.94 2.44 -0.21
AMTR_s00091p00128090 (evm_27.TU.AmTr_v1.0_scaffold00091.48)
- - - - 0.76 - - - - - -0.58 - - 0.09 -2.22 - - - 2.27 3.65 -0.05 -
AMTR_s00093p00112260 (evm_27.TU.AmTr_v1.0_scaffold00093.42)
2.11 - - - 2.31 - - - - - - - 0.13 2.31 2.56 - - - - -0.35 - -
AMTR_s00100p00072940 (evm_27.TU.AmTr_v1.0_scaffold00100.17)
- - - - 4.26 - - - 1.49 - - - - - - - - - - - - -
AMTR_s00101p00116640 (evm_27.TU.AmTr_v1.0_scaffold00101.90)
- - - - -8.03 - -10.33 - -11.64 - -1.6 -0.42 -4.75 -9.08 -6.53 1.94 -5.75 1.13 0.31 2.08 3.22 -7.35
AMTR_s00106p00130290 (evm_27.TU.AmTr_v1.0_scaffold00106.100)
- - - - -1.38 - - - - -4.09 0.48 3.08 -0.78 - -1.22 -0.29 0.46 0.08 1.35 1.58 -0.08 -0.09
AMTR_s00109p00148000 (evm_27.TU.AmTr_v1.0_scaffold00109.161)
- - - -3.68 -1.69 - -5.31 - - - 1.51 1.73 -1.17 -3.02 -0.16 -1.42 -0.09 0.54 -0.11 3.21 -0.2 -2.89
AMTR_s00117p00096720 (evm_27.TU.AmTr_v1.0_scaffold00117.37)
- - - - 2.5 - - - - - - - 1.64 - - - 3.73 - - - - -
AMTR_s00129p00033080 (evm_27.TU.AmTr_v1.0_scaffold00129.13)
-7.08 - - - -4.85 - -8.5 -10.06 -6.48 -4.38 -0.45 -1.19 -2.86 -6.67 -4.1 0.59 -0.61 1.54 0.68 1.89 3.31 -2.07
AMTR_s00134p00100940 (evm_27.TU.AmTr_v1.0_scaffold00134.33)
- - - - 0.45 - - - 2.42 3.23 - - - - - - - - - 2.57 - -
AMTR_s00164p00057540 (evm_27.TU.AmTr_v1.0_scaffold00164.23)
- - - - 0.34 - - - - - - - -1.23 -0.6 0.61 - - - - 1.03 3.95 -0.76
AMTR_s00180p00025240 (evm_27.TU.AmTr_v1.0_scaffold00180.11)
- -2.33 - -1.86 -0.99 - -4.3 - -4.64 -3.51 0.26 0.42 -0.74 -0.6 0.51 -2.23 0.54 1.14 1.34 2.53 0.31 1.15
AMTR_s00181p00044610 (evm_27.TU.AmTr_v1.0_scaffold00181.23)
- - - - -0.86 - - - - - 0.85 - -2.57 -3.66 -4.1 2.85 -1.53 1.71 2.23 -0.18 1.5 -2.94
AMTR_s00199p00019940 (evm_27.TU.AmTr_v1.0_scaffold00199.4)
2.29 - - - 3.63 - - 2.23 - - - - - - - - - - - - - -
-3.15 -4.2 -4.46 -0.03 -3.51 - - -5.05 -9.56 -8.89 - -5.04 -4.88 -5.27 -3.62 - -5.02 - - -2.9 4.34 -4.78
AMTR_s01332p00008900 (evm_27.TU.AmTr_v1.0_scaffold01332.1)
- - - - -3.99 - - - - - -1.3 0.37 -3.12 -2.46 -5.11 - -0.04 1.68 0.26 3.3 2.04 -0.74
1.9 - - - 0.15 - - -1.01 - - - - -1.88 -3.32 - - - - - -0.81 3.98 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.