Heatmap: Cluster_88 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.98 -1.13 -1.21 -0.96 -0.82 -0.58 -0.52 -0.64 -0.54 -0.55 -0.59 -0.91 0.06 0.33 2.07 0.21 -0.18 0.31 -0.01 1.12 -0.2 1.89 -0.42 -0.08 -1.95 -0.02 -0.95 -1.12 -0.2 -0.3 -0.08 -0.18
-0.43 -0.11 -0.04 -0.06 -0.31 -0.05 -0.17 -0.36 -0.25 -0.23 -0.29 -0.7 -0.2 0.3 1.72 0.06 -0.04 0.13 0.21 -0.14 -1.35 0.78 -0.13 -0.34 -0.42 0.07 0.63 0.17 -0.25 -0.23 -0.71 -0.57
-0.63 -0.11 0.09 0.14 0.21 0.24 0.38 -0.14 0.13 -0.37 -0.19 -0.46 -1.0 -1.59 2.52 -0.46 0.02 -1.94 -0.95 1.22 -1.69 1.64 -2.64 -2.79 -1.97 -1.34 0.07 0.28 -0.91 -0.46 -1.09 -1.17
-0.33 -0.42 -0.29 -0.19 0.01 0.12 -0.0 -0.28 -0.41 -0.54 -0.56 -0.85 -0.11 0.45 2.21 0.28 -0.27 -0.44 -0.01 0.95 -0.19 1.32 -0.65 -0.42 -1.05 -0.98 -0.77 -0.61 -0.47 -0.25 -0.99 -1.08
-0.47 -0.39 -0.33 -0.15 0.04 0.08 0.18 0.23 0.03 -0.13 -0.25 -0.41 -0.13 0.13 1.68 -0.11 -0.49 -0.77 -0.29 0.43 -1.1 1.32 -0.56 -0.33 -0.11 0.25 0.24 0.09 -0.75 -0.65 -0.65 -0.65
-0.31 -0.22 -0.03 0.13 0.3 0.29 0.27 -0.02 0.08 -0.1 -0.12 -0.25 -1.12 -0.07 2.56 0.05 -0.74 -0.66 -1.91 -0.07 -0.65 1.85 -1.64 -1.49 -0.51 -0.99 -0.78 -0.43 -1.25 -0.78 -1.51 -1.87
-0.54 -0.44 -0.38 -0.22 -0.16 -0.06 0.0 -0.15 -0.25 -0.37 -0.53 -0.59 -0.23 0.02 1.7 -0.14 -0.57 -0.64 -0.29 1.21 0.19 1.94 -0.88 -0.61 0.03 -0.46 -0.4 -0.54 -0.84 -0.84 -0.66 -0.71
-0.8 -0.26 -0.09 0.02 0.13 0.27 -0.01 -0.34 -0.51 -0.88 -0.95 -1.01 -0.25 0.66 2.17 0.08 -0.29 -0.57 0.17 -0.07 -0.45 1.11 -0.33 -0.21 0.03 -1.03 0.4 0.32 -0.73 -0.63 -1.05 -1.41
-1.05 -0.43 -0.31 -0.14 0.05 0.16 0.21 0.02 -0.33 -0.61 -0.72 -0.97 -0.64 -0.51 1.95 -0.5 -0.74 -1.05 -0.55 1.22 0.48 2.37 -1.21 -0.94 -0.05 -1.01 -0.14 -0.47 -1.29 -1.16 -1.41 -1.57
-0.76 -0.65 -0.55 -0.37 -0.18 -0.1 -0.09 -0.03 -0.37 -0.58 -0.59 -0.75 -0.09 0.21 2.03 -0.11 -0.4 -0.51 -0.12 1.19 -0.15 1.64 -0.67 -0.33 -0.24 -0.44 -0.22 -0.54 -0.65 -0.66 -0.63 -0.62
-0.15 0.17 0.04 0.14 0.14 0.18 0.2 -0.34 0.06 0.05 0.09 -0.19 -0.8 0.62 2.22 0.24 0.13 -0.01 -0.29 1.1 -0.82 0.61 -1.19 -1.09 -2.32 -1.82 -1.42 -1.33 -0.49 -0.22 -1.28 -1.25
-0.14 0.06 0.06 0.09 0.17 0.38 0.28 0.08 -0.09 -0.28 -0.32 -0.4 -0.35 0.18 1.86 -0.07 -0.33 -0.36 -0.0 0.73 -0.48 1.32 -0.42 -0.26 -1.17 -0.96 -0.81 -0.87 -0.67 -0.61 -0.94 -0.99
-0.3 -0.54 -0.91 -0.47 -0.55 -0.26 -0.41 -0.61 -0.37 -0.33 -0.76 -0.27 0.18 0.86 1.95 0.27 -0.03 0.28 0.44 0.88 -0.05 1.04 -0.49 -0.39 -0.44 -1.3 -1.48 -1.9 -0.01 -0.07 -0.31 -0.16
-0.35 -0.31 -0.17 0.03 0.09 0.21 0.08 0.17 -0.02 -0.31 -0.28 -0.42 -0.43 0.12 1.92 -0.36 -0.51 -0.6 -0.43 1.35 -0.18 1.82 -0.93 -0.69 -1.89 -1.26 -0.94 -1.37 -0.75 -0.87 -0.53 -0.54
-0.49 -0.5 -0.23 -0.19 0.08 0.18 0.04 0.18 -0.22 -0.45 -0.4 -0.74 -0.05 -0.17 1.49 -0.09 -0.33 -0.15 0.02 0.58 -0.72 1.26 -0.37 -0.03 -1.58 0.51 0.52 0.33 -0.52 -0.52 -0.73 -0.85
-0.75 -0.75 -0.89 -0.56 -0.41 -0.36 -0.28 -0.19 -0.29 -0.47 -0.52 -0.53 -0.45 0.31 1.68 -0.35 -0.74 -0.54 -0.53 0.76 0.82 2.47 -0.93 -0.76 -0.46 -0.31 -0.19 -0.47 -1.05 -0.89 -0.82 -0.6
-0.7 -0.68 -0.63 -0.42 -0.44 -0.27 -0.3 -0.24 -0.41 -0.65 -0.71 -0.71 0.03 -0.08 2.06 0.21 -0.13 0.22 0.35 0.94 0.29 1.44 -0.23 0.1 -0.7 -1.2 -1.28 -1.41 -0.23 -0.25 -0.38 -0.3
-0.42 -0.12 0.2 0.26 0.19 0.44 0.24 -0.55 -0.28 -0.48 -0.32 -0.54 -0.06 0.88 2.48 0.29 0.54 -0.83 -1.05 0.81 -2.2 0.16 -0.16 -0.23 -2.92 -2.95 -1.92 -1.34 -0.22 0.09 -1.04 -1.47
-0.68 -0.49 -0.94 -0.58 -0.9 -0.02 -1.15 -0.75 -0.56 -1.35 -0.69 -1.44 -1.03 -2.49 2.25 -0.45 -0.54 -1.01 -0.86 1.39 -0.46 3.16 -1.48 -1.87 -0.19 -1.15 -0.93 -0.24 -0.77 -0.77 -3.48 -4.43
-0.13 -0.11 -0.01 -0.1 0.3 0.29 0.04 -0.61 0.08 -0.08 0.03 -0.37 -0.33 -1.03 2.39 0.26 0.29 -0.43 -1.24 1.46 -0.39 1.64 -2.77 -2.66 -2.54 -2.51 -1.86 -1.3 -0.59 -0.5 -1.23 -1.26
-0.46 -0.15 0.12 0.16 0.16 0.36 0.05 -0.44 -0.22 -0.47 -0.22 -0.61 -0.08 0.82 2.52 0.3 0.48 -0.35 -1.24 0.81 -1.55 0.65 -0.33 -0.57 -2.93 -2.75 -2.04 -1.32 -0.29 0.03 -1.15 -1.77
-0.56 -0.18 -0.09 -0.11 0.01 0.24 0.19 -0.15 -0.46 -0.65 -0.82 -0.88 -0.07 -0.17 1.64 0.18 -0.04 -0.09 0.12 0.72 0.1 1.7 -0.26 -0.14 -0.33 -1.44 -0.82 -0.91 -0.35 -0.22 -0.62 -0.96
-0.53 -0.47 -0.47 -0.24 -0.29 -0.07 -0.18 -0.06 -0.32 -0.45 -0.62 -0.53 0.08 0.2 1.56 0.26 -0.13 -0.28 0.04 0.62 0.01 1.79 -0.27 -0.15 -0.74 -0.48 -0.45 -0.7 -0.34 -0.48 -0.33 -0.51
-0.08 -0.01 -0.09 -0.05 0.13 0.18 0.19 0.1 -0.02 -0.09 -0.19 -0.23 -0.08 0.3 0.83 0.1 -0.47 -0.53 0.09 0.52 0.01 0.59 -0.26 -0.17 -0.41 -0.03 0.08 0.02 -0.44 -0.39 -0.42 -0.26
-0.32 -0.31 -0.13 -0.08 0.19 0.29 0.24 0.12 -0.28 -0.54 -0.42 -0.81 -0.21 -0.13 1.48 -0.01 -0.17 0.1 -0.08 1.0 -0.54 1.31 -0.54 -0.26 -1.05 -0.68 0.07 -0.11 -0.43 -0.4 -0.51 -0.73
-0.73 -0.24 -0.27 0.06 0.56 0.71 0.51 0.04 -0.49 -0.8 -1.07 -1.01 -0.27 -0.34 2.32 -0.1 -0.45 -0.57 0.61 0.45 -0.97 1.18 -0.57 -0.45 -0.9 -1.22 0.09 0.03 -0.93 -0.69 -1.56 -1.66
-0.82 -0.73 -0.71 -0.54 -0.51 -0.33 -0.26 -0.13 -0.48 -0.69 -0.72 -0.84 -0.55 0.09 1.99 -0.38 -0.69 -0.72 -0.52 1.08 0.72 2.16 -0.72 -0.54 -0.23 -0.1 -0.02 -0.36 -0.89 -0.88 -0.73 -0.69
-1.93 -1.68 -1.24 -1.44 -1.22 -1.03 -0.85 -1.68 -0.76 -0.17 -1.46 -1.37 0.4 1.58 2.15 0.84 -1.34 1.7 -1.18 1.54 -4.91 1.57 -1.04 0.4 -0.09 -0.95 -0.38 -0.56 -1.68 -0.76 -2.6 -1.79
-0.43 -0.55 -0.25 -0.22 -0.0 -0.06 0.2 -0.82 0.28 -0.05 -0.0 -0.52 -0.85 -2.15 2.62 -0.39 0.12 -0.49 -0.78 0.72 -0.19 2.37 -4.36 -3.44 -2.68 -1.91 -1.27 -0.87 -0.67 -0.58 -1.53 -1.42
-0.41 -0.51 -0.09 -0.11 0.16 0.27 0.11 -0.42 -0.13 -0.6 -0.33 -0.43 -0.84 -1.65 2.56 0.04 -0.02 -1.12 -0.65 0.52 -0.87 1.8 -2.17 -2.41 -0.69 -0.19 0.01 0.54 -1.02 -0.63 -1.6 -2.22
-0.78 -0.34 -0.27 -0.33 0.24 -0.04 -0.1 -0.11 -0.3 -0.19 -0.41 -0.73 0.18 -0.4 2.14 0.16 -0.39 0.41 0.33 0.27 -0.12 0.64 -0.76 -0.76 -1.02 -0.3 -0.17 0.11 -0.82 -0.17 -0.61 -0.12
-0.9 -0.8 -0.45 -0.46 -0.63 -0.09 -0.42 -1.14 -0.58 -0.77 -0.61 -1.35 0.05 -0.57 2.48 0.47 0.51 0.03 0.59 0.33 0.17 1.81 -0.15 -0.46 -1.62 -2.26 -1.69 -0.87 -0.12 0.03 -1.14 -1.27
-0.28 -0.04 0.59 0.02 -0.44 -0.06 -0.24 0.08 -0.7 -0.66 0.1 -0.24 -0.04 -1.46 2.5 0.25 -0.28 -0.54 0.16 0.59 -0.87 1.09 -1.49 -0.89 -0.8 -0.48 -0.22 0.25 -0.93 -0.82 -1.9 -1.61
-0.6 -0.45 -0.4 -0.25 0.08 -0.19 0.07 -0.35 0.01 -0.11 -0.07 -0.68 -0.88 -1.84 2.67 -0.35 -0.12 -0.09 -0.35 1.41 -1.01 1.78 -1.17 -1.06 -2.25 -0.74 -1.33 -1.21 -0.97 -0.77 -1.26 -1.16
-0.97 -1.2 -1.11 -0.44 -0.07 -0.22 -0.07 -0.36 0.13 -0.29 -0.62 -1.2 -1.28 -0.86 2.44 -1.17 -0.6 -0.89 -0.86 1.16 -1.28 2.23 -2.05 -2.38 -0.17 -0.65 0.89 0.77 -1.26 -1.13 -1.09 -1.01
-0.45 -0.34 -0.03 -0.02 0.26 0.45 0.56 0.37 0.28 -0.1 -0.27 -0.43 -0.2 -0.26 2.39 0.0 -0.41 -0.89 -0.79 -0.18 -3.14 0.78 -1.21 -0.89 -0.72 -0.61 0.29 0.16 -0.57 -0.36 -1.1 -1.18
-0.43 -0.05 0.26 0.34 0.41 0.51 0.25 -0.13 0.03 -0.23 -0.34 -0.74 -0.08 0.57 2.45 0.34 0.18 -0.58 -1.31 -1.0 -0.86 -0.12 0.67 0.41 -1.35 -2.91 -1.47 -0.9 -0.65 -0.48 -1.66 -1.49
-0.41 -0.58 -0.69 0.06 -0.76 0.23 -0.19 -0.27 0.09 0.55 0.14 -0.21 -0.32 -0.5 2.53 -0.32 -0.3 -0.93 -0.93 -1.0 -1.62 2.1 -0.93 -1.49 -0.56 -1.3 -0.58 0.33 -1.24 -0.78 -1.02 -0.99
-0.91 -0.5 -0.49 -0.15 0.08 -0.06 -0.52 -0.53 -0.51 -1.73 -0.8 -0.89 -0.21 -0.95 2.79 0.44 -0.65 -1.24 -1.1 0.93 0.38 1.69 -2.45 -1.77 -0.99 -0.02 0.15 0.85 -1.79 -1.27 -2.11 -2.49
-0.67 -0.6 -0.34 -0.13 0.05 -0.13 0.11 -0.46 -0.05 -0.39 -0.42 -0.75 -0.7 -1.64 2.96 -0.41 0.03 -1.0 -1.51 1.73 -1.44 1.79 -2.61 -2.83 -1.09 -2.46 -1.47 -0.88 -0.93 -0.71 -1.36 -1.71
-0.33 -0.18 0.08 -0.2 -0.32 0.08 -0.27 -0.46 -0.06 -0.19 -0.31 -0.56 -0.27 0.22 1.93 0.69 -0.28 0.22 -0.63 0.02 -1.31 1.17 -0.46 -0.69 -0.18 -1.3 -0.5 -0.31 -0.12 0.16 0.06 -0.48
-0.58 -0.44 -0.11 -0.45 -0.37 -0.13 -0.01 -0.9 -0.3 -0.77 -0.3 -0.77 -1.05 -2.77 2.91 -0.34 0.0 -1.32 -1.39 1.38 -0.59 2.53 -3.19 -3.32 -2.08 -2.89 -1.62 -0.9 -1.05 -0.69 -1.61 -1.84
-0.53 -0.11 0.12 0.32 0.26 0.25 0.48 0.38 0.38 0.23 0.04 -0.21 -0.21 0.21 2.15 -0.75 -0.45 -1.54 -0.17 -0.12 -2.1 1.49 -1.58 -1.41 -0.95 -0.12 -0.27 -0.18 -1.09 -0.85 -1.48 -1.49
-0.39 -0.44 -0.38 -0.26 -0.07 -0.06 0.06 0.09 -0.03 -0.1 -0.08 -0.44 -0.94 -0.85 1.83 0.08 -0.31 -0.1 -0.01 0.83 -0.61 1.54 -0.09 -0.07 -0.82 -0.0 -0.14 0.23 -0.63 -0.59 -1.5 -1.57
-2.63 -2.94 -0.35 - -3.72 -1.28 - -3.08 - -4.03 -2.96 -1.88 -1.65 0.24 3.28 -1.6 - - -0.48 1.57 -0.44 3.32 - - - 0.3 -0.14 0.76 - -3.79 - -
-3.35 -1.81 -1.12 -0.99 -1.42 -2.37 -1.14 -4.73 -1.92 -4.68 -2.62 -2.65 0.77 -0.72 1.77 1.48 -1.13 -2.13 1.97 0.85 1.43 3.33 -4.39 -2.54 -2.37 - -3.01 - -1.35 -2.5 -2.51 -
0.12 0.19 0.26 0.24 0.21 0.59 0.38 -0.18 0.19 -0.22 0.36 -0.24 -1.51 -3.52 1.84 -0.78 -0.1 -2.35 -0.97 0.87 0.4 2.21 -2.07 -2.82 -1.23 -1.39 -0.42 0.24 -1.26 -0.85 -2.3 -3.24
-0.37 -0.09 0.01 -0.08 0.33 0.4 0.66 -0.17 -0.16 -0.41 -0.55 -0.94 -0.76 -0.41 2.02 -0.65 -0.73 -1.26 -0.64 1.19 0.1 2.36 -1.24 -1.27 -1.88 -1.56 -0.36 -0.41 -1.42 -1.4 -1.92 -2.04
-0.28 -0.3 -0.19 -0.09 -0.14 0.03 0.02 0.14 0.03 -0.2 -0.04 -0.25 0.02 0.36 1.47 0.04 -0.33 -0.37 -0.01 0.57 -1.25 1.01 -0.51 -0.36 -0.88 0.49 0.25 0.18 -0.45 -0.4 -1.1 -1.01
-0.34 -0.21 -0.15 -0.11 -0.08 0.19 0.01 -0.12 -0.36 -0.44 -0.53 -0.6 0.15 -0.08 1.28 0.31 -0.13 0.11 0.37 -0.1 -1.43 0.75 -0.17 -0.09 -1.22 0.37 0.64 0.53 -0.29 -0.27 -0.47 -0.49
-0.45 -0.45 -0.33 -0.23 -0.04 0.02 0.08 0.18 -0.06 -0.18 -0.32 -0.42 -0.19 0.32 1.98 -0.08 -0.46 -0.71 -0.19 1.04 -0.91 1.63 -0.66 -0.41 -2.26 -0.62 -0.55 -0.82 -0.58 -0.54 -0.34 -0.37
-0.67 -0.29 -0.2 -0.02 0.03 -0.06 -0.2 -0.07 -0.05 -0.12 -0.21 -0.6 0.45 0.62 1.61 0.13 -0.49 -0.24 -0.07 0.63 -0.79 0.71 -0.14 -0.01 -0.87 -0.46 -0.03 0.08 -0.77 -0.39 -0.43 -0.24
-0.24 -0.32 -0.19 -0.15 0.15 0.26 0.23 0.05 0.01 -0.13 -0.3 -0.38 -0.37 -0.02 2.05 -0.16 -0.21 -0.15 0.01 0.05 -0.44 1.15 -0.58 -0.29 0.4 -1.1 -1.12 -1.03 -0.39 -0.21 -0.78 -0.8
-0.31 -0.39 -0.04 -0.15 0.19 0.04 0.03 -0.04 0.22 -0.02 0.2 -0.28 0.19 -0.31 1.59 -0.04 -0.35 -0.61 0.17 -0.12 -0.48 -0.67 -0.63 -0.45 -0.55 0.6 0.22 0.1 -0.8 -0.32 0.04 0.37
-0.3 -0.05 -0.09 0.03 0.24 0.4 0.21 -0.03 -0.24 -0.4 -0.51 -0.59 -0.28 -0.18 1.62 -0.08 -0.19 -0.28 -0.06 0.78 -0.28 1.52 -0.41 -0.32 -0.82 -0.78 -0.08 -0.24 -0.75 -0.64 -0.83 -0.84
-0.43 -0.29 -0.21 -0.13 0.04 0.12 0.22 0.04 -0.21 -0.42 -0.47 -0.62 -0.22 0.21 1.76 -0.04 -0.26 -0.27 -0.22 0.76 -0.39 1.25 -0.41 -0.29 -0.6 -0.17 -0.03 -0.15 -0.55 -0.53 -0.65 -0.73
-0.26 0.39 0.41 0.22 0.26 0.1 0.07 -0.09 0.2 0.24 0.39 -0.1 -0.95 -1.37 2.14 -0.51 -0.24 -0.48 -0.52 0.24 -0.32 1.98 -3.79 -3.2 -3.97 -0.61 -0.54 -0.71 -1.32 -0.9 -0.71 -0.83
-1.53 -1.12 -1.34 -0.59 -0.2 -0.36 -0.34 -1.03 -1.42 -1.82 -1.91 -2.04 -0.31 0.2 1.77 -0.13 0.55 0.77 0.56 1.01 0.07 1.77 0.19 -0.07 -1.39 -0.89 -0.01 -0.47 -0.35 -0.3 -0.32 0.58
-0.31 -0.02 -0.03 0.12 0.23 0.38 0.28 0.22 -0.22 -0.28 -0.54 -0.61 -0.11 0.5 1.68 -0.03 -0.25 -0.84 0.17 0.45 -0.89 0.01 -0.31 -0.08 -0.22 -0.3 0.23 0.06 -0.61 -0.67 -0.52 -0.59

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.