Heatmap: Cluster_88 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
338.62 303.83 287.95 343.37 376.5 446.7 464.28 427.44 458.64 455.89 444.0 355.73 696.64 835.24 2796.94 771.93 586.75 824.51 660.85 1453.59 580.99 2473.73 497.0 629.98 172.67 655.83 345.38 307.21 580.98 539.67 630.52 586.8
11.73 14.64 15.38 15.15 12.69 15.21 14.05 12.29 13.29 13.49 12.9 9.72 13.71 19.39 51.93 16.43 15.33 17.26 18.19 14.34 6.17 27.05 14.46 12.46 11.77 16.55 24.45 17.74 13.3 13.49 9.63 10.65
7.47 10.67 12.31 12.73 13.38 13.67 15.07 10.51 12.66 8.96 10.14 8.42 5.78 3.84 66.06 8.38 11.71 3.0 5.97 26.83 3.59 35.99 1.85 1.67 2.95 4.56 12.13 14.03 6.14 8.39 5.44 5.14
87.89 82.75 90.58 97.45 111.76 120.4 110.51 91.25 83.3 76.22 75.29 61.63 102.36 151.66 514.29 134.91 91.92 81.55 110.17 214.58 97.01 276.98 70.57 83.06 53.65 56.35 64.89 72.5 79.79 93.13 55.8 52.53
363.34 382.49 399.51 453.99 515.14 532.0 567.83 589.92 514.23 459.59 421.73 378.89 458.5 549.43 1608.05 466.12 358.93 293.72 411.38 677.75 234.96 1253.63 340.03 398.89 466.88 596.58 595.48 534.03 298.47 321.33 319.35 319.5
32.69 34.87 39.71 44.26 50.13 49.49 48.94 40.13 42.89 37.84 37.39 34.13 18.72 38.74 238.54 41.95 24.33 25.72 10.82 38.59 25.82 146.73 13.01 14.4 28.48 20.47 23.69 30.11 17.07 23.64 14.27 11.06
367.1 394.56 410.02 459.94 478.62 513.49 534.57 481.85 448.24 414.28 370.71 353.91 455.83 541.97 1740.29 485.83 359.11 343.69 436.7 1238.03 610.59 2049.01 290.42 349.63 546.92 388.58 403.99 367.82 298.58 297.83 337.37 327.21
224.5 326.5 365.6 394.12 426.27 468.98 387.99 307.69 273.92 212.29 201.41 193.05 328.81 616.12 1759.62 412.2 319.63 263.09 439.31 370.42 286.0 839.96 309.63 337.51 397.7 191.1 514.66 486.83 235.69 252.3 188.98 146.85
77.06 117.77 128.33 144.69 164.26 177.59 183.97 160.75 126.16 104.52 96.76 81.17 101.76 111.41 615.37 112.57 95.0 76.77 108.44 370.58 222.09 819.88 68.71 83.08 153.35 79.0 144.69 115.09 65.08 71.0 59.68 53.57
262.11 283.47 304.31 343.8 393.08 415.39 417.48 434.71 343.64 297.19 294.68 264.27 417.42 514.22 1807.92 412.81 336.16 311.08 408.02 1010.16 399.24 1379.69 279.92 354.56 375.14 326.54 380.51 305.78 283.23 281.81 287.27 288.71
11.79 14.74 13.44 14.43 14.43 14.83 15.04 10.32 13.62 13.53 13.87 11.43 7.51 20.11 61.07 15.4 14.31 12.95 10.72 28.08 7.38 19.91 5.72 6.14 2.61 3.69 4.9 5.19 9.28 11.21 5.39 5.49
396.05 454.25 453.97 461.8 490.34 564.35 529.23 461.21 409.69 357.21 348.81 329.7 340.72 491.78 1575.21 415.19 346.36 339.77 433.99 721.53 311.07 1086.38 325.06 363.39 193.73 224.23 247.82 238.53 273.99 285.58 226.79 219.48
135.53 114.18 88.5 120.07 114.08 139.19 125.21 108.81 129.11 132.6 98.52 138.1 188.57 302.51 644.71 200.45 163.53 201.92 225.9 305.73 160.48 342.66 118.85 127.22 122.42 67.55 59.89 44.7 165.22 158.25 134.36 149.15
480.71 493.34 546.6 624.59 654.59 710.96 646.14 688.85 606.44 493.76 504.62 457.57 456.55 665.74 2315.21 478.31 431.59 404.04 455.7 1560.37 542.31 2166.76 321.82 381.09 165.53 255.95 319.09 237.02 365.12 336.44 425.77 422.04
357.82 356.22 427.57 442.08 532.05 568.2 517.29 569.56 433.39 368.0 380.42 300.9 487.67 446.84 1410.02 474.26 401.14 454.98 511.56 752.46 306.29 1202.44 388.3 491.31 168.08 715.88 720.16 632.1 352.11 350.88 302.61 279.12
87.43 87.21 79.24 99.85 110.77 114.41 120.64 129.04 119.94 105.75 102.13 101.4 107.73 182.49 469.3 115.58 88.17 100.81 101.46 248.07 259.83 814.71 77.08 86.72 106.82 118.23 128.94 105.91 70.9 79.41 83.28 97.2
309.22 312.82 325.44 374.97 369.36 415.74 408.87 425.53 379.11 320.33 307.2 308.32 512.94 474.94 2103.37 580.13 458.19 587.58 639.41 964.37 613.87 1361.8 429.21 537.04 309.45 218.25 206.75 189.79 429.08 422.23 385.34 409.3
87.72 108.26 135.32 141.26 134.07 159.65 138.86 80.42 97.14 84.3 94.32 80.71 113.28 216.23 654.53 143.46 171.26 66.16 56.84 205.83 25.68 131.51 105.57 100.04 15.53 15.25 31.12 46.65 100.95 125.65 57.12 42.59
6.13 7.03 5.15 6.57 5.26 9.71 4.44 5.85 6.66 3.87 6.12 3.64 4.82 1.75 46.99 7.2 6.78 4.88 5.42 25.85 7.15 88.1 3.54 2.7 8.61 4.44 5.17 8.33 5.79 5.79 0.88 0.46
16.18 16.46 17.63 16.54 21.84 21.66 18.18 11.59 18.78 16.73 18.09 13.74 14.14 8.67 92.93 21.26 21.6 13.16 7.53 48.8 13.52 55.3 2.59 2.81 3.04 3.12 4.89 7.19 11.75 12.51 7.56 7.41
78.97 97.68 118.1 121.61 121.13 139.36 112.47 80.19 93.09 78.5 93.18 71.15 102.73 191.71 622.85 133.96 151.96 85.54 45.92 190.07 37.16 170.56 86.34 72.96 14.27 16.14 26.51 43.39 88.89 110.64 48.99 31.83
138.62 181.58 192.42 189.5 206.36 242.26 233.93 185.14 148.74 130.98 116.23 111.67 195.71 182.18 636.78 232.37 199.91 192.86 222.51 338.27 219.83 664.59 171.45 186.58 163.22 75.68 116.34 109.11 161.12 176.37 132.94 105.08
367.94 384.23 383.81 450.36 434.28 506.7 467.28 508.87 426.04 388.33 344.57 367.85 559.9 608.71 1561.08 633.15 486.26 437.28 544.76 816.79 535.4 1837.09 440.42 478.55 317.67 379.43 387.21 325.63 420.0 379.52 421.27 373.59
144.57 151.88 143.71 147.99 168.03 173.14 175.04 163.57 151.25 143.89 134.01 130.64 144.66 188.18 271.85 163.68 110.77 106.3 163.25 218.9 154.12 231.16 127.89 135.7 115.21 149.91 162.01 155.26 112.89 117.21 114.29 127.84
287.08 289.12 328.62 338.3 409.86 438.36 424.86 389.92 295.75 247.21 268.32 204.79 309.02 327.45 1000.91 357.28 317.74 384.92 338.7 719.35 246.64 889.45 246.45 298.44 173.15 223.87 377.58 333.03 266.73 271.29 252.42 216.54
46.74 65.72 64.17 80.64 114.03 126.55 110.74 79.51 55.12 44.46 36.88 38.55 64.21 61.42 388.11 72.24 56.65 52.44 118.04 105.71 39.65 175.98 52.34 56.83 41.43 33.27 82.64 79.12 40.67 48.14 26.26 24.47
478.55 510.37 517.28 580.11 594.62 672.65 704.23 771.22 606.13 524.71 512.0 473.08 577.68 898.75 3350.32 649.73 522.94 512.28 589.6 1786.93 1398.38 3790.97 513.9 581.87 718.94 789.07 832.42 661.13 457.08 459.23 511.61 525.71
1.1 1.3 1.76 1.54 1.78 2.04 2.31 1.3 2.47 3.71 1.51 1.61 5.5 12.5 18.49 7.44 1.65 13.53 1.84 12.16 0.14 12.41 2.03 5.49 3.92 2.16 3.21 2.84 1.3 2.47 0.69 1.21
3.04 2.8 3.45 3.51 4.08 3.92 4.71 2.32 4.98 3.95 4.09 2.86 2.27 0.92 25.08 3.13 4.44 2.92 2.39 6.73 3.59 21.21 0.2 0.38 0.64 1.09 1.7 2.24 2.57 2.74 1.41 1.53
1.64 1.53 2.04 2.02 2.43 2.61 2.35 1.63 1.98 1.43 1.73 1.62 1.21 0.69 12.83 2.24 2.15 1.0 1.39 3.12 1.18 7.55 0.48 0.41 1.35 1.9 2.19 3.15 1.07 1.4 0.72 0.47
0.56 0.76 0.8 0.76 1.13 0.93 0.9 0.89 0.78 0.84 0.72 0.58 1.09 0.73 4.24 1.07 0.73 1.27 1.21 1.16 0.89 1.49 0.57 0.57 0.47 0.78 0.85 1.04 0.54 0.85 0.63 0.88
6.66 7.14 9.09 9.0 8.03 11.67 9.29 5.64 8.32 7.29 8.12 4.87 12.84 8.38 69.27 17.22 17.74 12.64 18.75 15.56 13.92 43.45 11.18 9.05 4.03 2.59 3.86 6.79 11.41 12.68 5.63 5.16
0.98 1.15 1.79 1.21 0.88 1.14 1.01 1.26 0.73 0.75 1.28 1.01 1.15 0.43 6.73 1.41 0.98 0.82 1.32 1.79 0.65 2.53 0.42 0.64 0.68 0.86 1.02 1.42 0.62 0.67 0.32 0.39
4.71 5.25 5.42 6.03 7.57 6.29 7.48 5.6 7.21 6.62 6.81 4.45 3.89 1.99 45.34 5.6 6.59 6.71 5.62 19.05 3.55 24.58 3.17 3.43 1.51 4.29 2.84 3.1 3.65 4.2 2.99 3.2
2.35 2.01 2.14 3.39 4.39 3.95 4.4 3.59 5.05 3.76 3.0 2.01 1.9 2.53 25.09 2.05 3.05 2.49 2.55 10.32 1.89 21.65 1.11 0.89 4.09 2.93 8.55 7.87 1.92 2.1 2.16 2.28
4.07 4.4 5.45 5.47 6.66 7.58 8.22 7.19 6.78 5.21 4.6 4.13 4.85 4.64 29.1 5.56 4.17 3.01 3.22 4.92 0.63 9.52 2.4 2.99 3.38 3.64 6.79 6.22 3.74 4.34 2.59 2.45
20.9 27.12 33.61 35.56 37.47 40.0 33.43 25.69 28.77 23.93 22.31 16.87 26.72 41.8 154.12 35.55 31.87 18.88 11.36 14.11 15.54 25.85 44.94 37.35 11.01 3.74 10.13 15.03 17.99 20.19 8.92 10.01
1.63 1.44 1.34 2.25 1.28 2.53 1.89 1.79 2.3 3.16 2.38 1.86 1.73 1.52 12.48 1.72 1.76 1.13 1.13 1.08 0.7 9.24 1.14 0.77 1.46 0.88 1.44 2.72 0.91 1.26 1.06 1.09
1.14 1.5 1.52 1.93 2.25 2.05 1.48 1.48 1.49 0.64 1.22 1.15 1.84 1.1 14.79 2.89 1.36 0.91 1.0 4.07 2.77 6.89 0.39 0.63 1.08 2.1 2.37 3.86 0.62 0.88 0.5 0.38
11.01 11.56 13.82 16.01 18.14 15.96 18.84 12.77 16.89 13.38 13.06 10.4 10.79 5.62 136.25 13.14 17.93 8.74 6.16 58.27 6.46 60.62 2.87 2.46 8.24 3.18 6.34 9.53 9.17 10.67 6.83 5.36
14.06 15.61 18.69 15.38 14.11 18.61 14.6 12.79 16.86 15.45 14.21 12.0 14.63 20.48 67.19 28.48 14.53 20.58 11.37 17.84 7.13 39.65 12.82 10.93 15.54 7.18 12.49 14.18 16.18 19.76 18.45 12.69
3.09 3.42 4.3 3.39 3.59 4.24 4.59 2.48 3.77 2.71 3.77 2.71 2.24 0.68 34.76 3.67 4.64 1.86 1.77 12.03 3.09 26.81 0.51 0.46 1.09 0.62 1.5 2.48 2.24 2.87 1.52 1.29
4.16 5.56 6.52 7.47 7.18 7.14 8.35 7.84 7.83 7.02 6.18 5.19 5.19 6.96 26.74 3.56 4.39 2.07 5.32 5.54 1.4 16.92 2.01 2.26 3.12 5.53 4.97 5.28 2.83 3.34 2.16 2.14
14.83 14.36 14.96 16.25 18.51 18.62 20.25 20.7 19.09 18.1 18.45 14.37 10.12 10.78 68.93 20.58 15.68 18.16 19.31 34.45 12.76 56.48 18.26 18.47 11.02 19.39 17.6 22.77 12.54 12.95 6.86 6.56
0.05 0.04 0.23 0.0 0.02 0.12 0.0 0.04 0.0 0.02 0.04 0.08 0.1 0.35 2.89 0.1 0.0 0.0 0.21 0.89 0.22 2.99 0.0 0.0 0.0 0.37 0.27 0.51 0.0 0.02 0.0 0.0
0.16 0.45 0.73 0.8 0.59 0.31 0.72 0.06 0.42 0.06 0.26 0.25 2.7 0.96 5.41 4.42 0.73 0.36 6.21 2.87 4.27 16.0 0.08 0.27 0.31 0.0 0.2 0.0 0.62 0.28 0.28 0.0
2.32 2.43 2.54 2.52 2.45 3.21 2.77 1.87 2.42 1.83 2.73 1.8 0.74 0.19 7.64 1.24 1.99 0.42 1.09 3.88 2.81 9.85 0.51 0.3 0.91 0.81 1.59 2.51 0.89 1.18 0.43 0.23
32.01 38.86 41.73 39.14 52.1 54.71 65.34 36.94 36.96 31.11 28.32 21.54 24.52 31.11 168.07 26.48 25.0 17.26 26.68 94.75 44.44 213.1 17.49 17.19 11.28 14.06 32.25 31.25 15.53 15.71 10.93 10.06
28.42 28.17 30.22 32.52 31.28 35.23 35.07 38.24 35.32 30.18 33.73 29.16 35.13 44.34 96.07 35.68 27.49 26.74 34.4 51.36 14.58 69.82 24.23 26.99 18.82 48.61 41.1 39.09 25.39 26.19 16.13 17.12
322.31 352.13 367.42 379.25 386.68 465.02 412.13 375.66 317.67 300.86 282.79 269.99 453.2 387.06 994.21 507.65 373.54 440.38 529.1 379.69 151.59 685.26 362.08 384.41 175.27 527.68 634.44 589.71 333.85 337.93 294.26 291.44
531.45 528.81 574.57 618.08 706.18 736.22 763.48 819.82 696.86 641.02 582.18 540.41 633.67 903.22 2860.42 686.23 527.62 443.57 636.28 1489.12 385.06 2237.24 457.45 544.87 151.06 470.23 494.36 411.64 485.37 497.0 571.81 561.86
8.61 11.21 11.96 13.54 14.03 13.17 11.9 13.09 13.22 12.63 11.89 9.05 18.75 21.04 42.01 14.97 9.79 11.64 13.06 21.17 7.92 22.44 12.47 13.65 7.52 10.0 13.39 14.53 8.07 10.45 10.2 11.64
67.62 64.04 69.96 72.15 88.76 95.82 94.2 82.98 80.34 73.02 64.98 61.52 61.82 78.92 331.58 71.8 69.15 72.15 80.39 82.95 59.07 178.03 53.43 65.25 105.5 37.23 36.77 39.32 61.16 69.08 46.76 46.08
5.32 5.02 6.42 5.92 7.5 6.77 6.73 6.4 7.66 6.51 7.57 5.42 7.52 5.33 19.85 6.4 5.19 4.33 7.4 6.06 4.72 4.15 4.25 4.82 4.51 10.0 7.68 7.08 3.79 5.29 6.76 8.5
318.62 377.3 367.84 398.17 463.35 516.73 451.84 382.14 330.74 296.21 273.98 260.3 322.44 345.64 1203.88 369.68 341.97 321.57 374.83 673.59 322.94 1119.12 294.37 314.02 221.82 228.26 371.12 331.58 233.36 250.31 220.3 219.26
340.69 376.04 398.68 420.07 473.74 500.39 536.13 472.89 398.5 342.96 330.9 299.31 393.8 530.49 1561.85 445.85 383.96 380.7 395.65 779.96 351.35 1096.61 346.74 376.76 303.17 408.71 451.59 413.34 313.11 319.38 292.86 277.11
4.54 7.12 7.25 6.33 6.55 5.83 5.74 5.12 6.28 6.45 7.16 5.08 2.83 2.1 24.07 3.83 4.6 3.9 3.79 6.43 4.36 21.56 0.39 0.59 0.35 3.57 3.74 3.34 2.18 2.91 3.34 3.07
59.59 79.22 68.36 114.56 149.99 134.81 136.47 84.36 64.58 48.84 45.78 41.88 139.52 198.66 589.46 158.02 252.64 295.01 255.26 347.7 180.84 588.51 196.24 164.55 65.74 93.07 171.13 124.86 135.49 139.81 138.64 257.96
254.59 310.72 308.26 341.07 369.5 410.8 381.43 366.71 270.89 258.42 216.62 206.01 290.56 445.34 1010.8 308.1 264.42 175.55 353.27 429.18 170.25 317.32 253.95 296.97 270.14 255.43 369.72 328.69 206.13 197.79 219.32 209.3

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)