Heatmap: Cluster_71 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-1.51 -2.73 -1.38 -0.11 -2.08 1.14 1.78 1.37 0.01 1.18 -0.17 -1.52 -4.72 -4.14 -0.3 -2.86 -0.44 -0.58 -1.96 - - - -1.14 -3.27 -1.14 -0.97 2.65 2.09 -0.56 0.11 -1.75 -1.37
-0.17 - - 0.7 - 2.0 2.68 - 0.26 -26.61 1.19 - - - - - -0.23 - -0.22 - - - - - - -23.95 3.71 - -0.34 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - 3.53 4.35 - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - 3.53 4.35 - - - -
1.35 - - - - - - 1.09 - - - 2.71 - - -4.3 - - - - - - - - - - - 2.91 3.72 - - - -
-0.31 - 1.33 1.11 - - - 0.58 - - 0.71 - - - 2.44 - - - 0.57 - - - - - - - 3.9 - - 0.59 - -
-2.96 - -2.2 -2.34 -1.77 -1.75 - - -2.21 -1.15 -1.12 -0.38 -1.64 -2.04 - -0.5 -1.68 -0.42 3.29 - - - - - 2.0 -0.81 2.86 2.0 -1.93 - -0.83 -1.91
- - - - - -0.96 - -1.99 -2.73 -1.47 - - -2.43 - -1.75 - - -1.92 4.01 - - - - -2.64 2.37 1.0 1.87 1.22 - - -0.85 -
- - - - - 0.07 -0.09 - 0.63 - - - - - - - 0.2 -0.02 3.08 - - - - - - - 2.43 3.25 1.0 - - -0.04
- - - - - 0.81 - 0.33 2.04 0.34 - - - - - - - - - - - - - - - - 2.15 3.97 0.79 0.79 - -
-3.47 - -3.6 0.08 -2.17 -3.16 -2.56 - - -1.76 -3.52 -1.83 0.99 -1.97 0.96 0.71 1.05 0.57 - 0.12 - -2.67 0.14 -1.14 - 1.67 2.53 - 1.94 1.77 -29.14 0.29
-0.69 -1.13 - - - 0.08 -1.16 -1.28 1.05 -1.38 0.1 -1.2 1.17 -1.2 -0.09 0.18 -0.97 - 2.35 - - - -0.84 - - 1.08 1.96 2.84 - - -1.0 -1.07
- - - - - - - - - - - - 0.66 1.48 1.64 - - - 1.5 - - - - 1.43 - 1.49 1.89 2.79 0.51 0.51 0.47 0.42
-1.32 -0.62 -0.28 -0.87 -0.6 -0.28 0.23 -0.92 -0.63 -0.51 -1.34 -1.19 -6.47 - - -7.46 1.8 1.18 -0.77 - - - -1.86 -3.41 - -0.15 2.61 2.4 0.17 0.51 0.4 0.42
- - - - - - - - - - - - - - - - - - 1.86 - - - - - - - 4.62 - - 1.92 - -10.87
- - - - - - 1.63 - - - - - - - - - - - - - - - 1.94 - - - 3.18 4.0 - - - -
- -3.19 - 2.03 - -2.91 - 1.8 2.01 - - - - - - - - - 2.09 - - - - 2.17 - - 3.51 - - - -8.85 -
-0.72 0.19 - - - - 0.28 0.13 - - - 1.25 - - - - - - - - - - 1.33 - 2.48 2.43 2.84 - 1.89 - - 0.3
-1.35 -1.16 -1.47 -0.87 0.02 -0.27 0.26 0.08 0.08 0.14 -1.33 -0.75 -1.52 -1.59 -4.41 -1.59 -0.81 -0.63 0.99 -0.38 -2.44 -2.2 -0.1 0.66 -0.19 0.74 2.36 1.92 0.02 0.13 -0.34 -0.52
-1.21 -1.93 -0.79 -0.47 -0.41 0.02 0.36 0.64 -0.12 -0.26 -1.57 -1.42 -0.29 -0.97 0.33 0.21 0.45 0.27 0.45 -2.54 -2.27 -3.63 -0.17 -0.92 -0.53 0.76 2.29 1.9 0.03 -0.37 -1.75 -1.95
- -0.37 - - - -0.17 - 1.26 2.07 0.76 - -0.32 - - -1.92 -0.88 -0.06 - 1.14 - - - -1.05 0.48 0.83 -0.11 2.19 - 1.06 1.4 1.37 -0.28
- 2.29 - - - - - - - - - - - - - - 1.57 - - - - - - - - - 2.94 3.76 - 1.58 - -
- - - - - - - - - 2.59 1.85 - - - - - - - 2.94 - - - - - - - 3.88 - - - - -
- - - - - - - - - 2.8 - - - - - - - - 2.1 - - - - - - - 4.37 - - - - -
-0.79 -0.6 -1.84 -1.82 -1.44 -1.05 -1.53 -1.88 -1.17 -1.63 -3.74 -2.02 -2.03 -0.64 -0.21 2.11 -1.67 -0.71 0.99 - -1.85 - -2.75 -3.06 -3.2 1.75 2.17 2.98 -0.48 -0.12 -2.03 -1.52
-0.07 - - - - - 0.24 0.85 -0.28 1.33 0.62 0.67 - -0.85 - - - -1.15 0.8 - - - - -0.2 - 0.9 3.13 2.6 -1.19 -1.19 -1.23 -
- - - -1.03 - - 1.67 -0.92 1.09 0.08 - -0.74 - - - - -0.66 1.9 -0.67 - - - - -0.61 - 2.54 2.42 1.72 0.4 0.38 -0.62 -0.7
-0.96 - - - - - - - -6.54 - - - - - - - - - - - - - - - - - 4.98 - - - - -
0.47 - - - - - - - - - - - - - - - - 4.08 1.73 - - - - - - - 3.38 - - - - -
- - - - - - - 2.12 1.58 1.59 - - - - - - - - - - - - - - - - 4.44 - - - - -
-1.65 -0.12 -1.79 - -0.71 1.88 -0.31 0.74 0.11 -0.11 - -0.66 - - -2.65 -2.85 -1.8 - -2.76 - - - -1.46 -0.44 0.87 0.1 2.82 2.95 -0.96 -0.49 -1.61 -
- 0.88 - - - -0.5 -0.66 1.06 -0.94 -0.95 1.75 -0.74 -0.34 - -0.24 - 0.5 -23.17 - - - - -0.36 - - 0.56 3.4 1.68 1.03 - - -0.61
- - - - - - - - - - - - - - - - - - 2.4 - - - - - - - 3.99 - 3.44 - - -
- - - - - - 1.96 1.74 - - - - - - - - - - 2.14 - - - - 2.08 - - 3.55 - - - 2.13 -
- - - - - - - - - - - 3.04 - - - - - - - - - - - - - - 4.57 - - - - -
0.47 - - - - - - - - - - - - - - - - - - - - - - - - - 4.02 3.84 - - - -
-1.12 -1.02 -2.24 0.87 0.46 1.37 1.42 -1.27 -1.26 - -0.17 0.01 - -1.99 -1.57 - -2.13 - - - - 1.18 - - 2.33 0.42 2.61 1.95 -2.04 - - -
0.08 2.42 - - - - - - - - - 1.48 1.59 - - 1.63 1.61 - - - - - - - - - 3.02 - - 1.51 - 1.42
- - - - - 0.5 1.3 0.14 - - - - - - - - 0.39 0.63 2.39 - - - 1.34 - - - 2.85 - 0.32 2.41 1.39 -
0.03 - - - - - - - - - - 1.33 - - - - - - - - - - - - - 2.67 2.97 - 3.08 1.58 - 1.49
0.72 0.19 -0.07 0.19 -0.01 1.71 1.37 -2.63 -0.9 -2.63 0.32 -0.72 - -17.05 0.26 -0.25 -1.23 0.35 1.24 - -1.31 - -2.5 -1.07 - 1.11 2.35 1.03 -0.76 - -1.66 -2.28
-1.35 -2.83 -3.11 -0.86 0.49 -0.02 -1.64 -1.53 -2.85 1.66 -1.69 -1.73 -0.79 0.05 1.52 0.33 -0.11 0.24 1.31 -1.4 - - - -0.74 - -0.51 2.91 1.79 - -2.78 -1.23 -1.89
-0.82 1.35 -0.7 1.47 0.07 1.24 0.12 0.77 0.96 -0.02 0.44 -0.39 0.87 -0.78 0.69 -1.09 -0.92 -1.79 -0.27 - - - -1.0 -3.66 -1.58 -0.38 0.58 1.69 -0.5 -0.59 -2.05 -3.69
0.04 0.32 0.06 -0.66 -0.1 0.08 0.33 -0.52 0.1 -0.21 -0.42 -0.31 - -5.44 -5.39 -6.23 1.83 -0.32 -4.38 -2.31 -1.98 -0.71 -4.43 - -3.32 -0.43 2.3 2.35 0.85 0.82 -1.46 -2.26
2.01 - - - - - - - - - - - - - - - - - - - - - - - - - 4.36 - - - 2.88 -
- - - - - - -0.03 - 1.3 - - - 0.23 - - - - 2.65 1.11 - - - - - - 1.12 3.11 2.34 -0.0 - 0.09 0.03
0.91 1.24 - - - 0.35 - - - 0.06 - - - - - - - 0.69 1.38 - - - 1.44 1.38 2.52 1.47 1.87 - 1.33 - - 0.32
-4.59 -3.22 -1.83 - -3.01 - -0.6 - -1.74 -3.44 -0.85 -3.0 -0.86 -2.87 0.62 -1.22 1.14 0.14 2.15 - -1.73 1.14 0.81 -2.08 1.22 0.61 2.13 0.21 0.77 0.79 -0.47 0.34
- - - - - 0.02 - -1.27 - - 0.73 -0.94 - - - - - - -0.9 - - 2.3 -0.96 - 1.94 1.8 3.13 1.37 -0.88 1.11 -0.91 -0.99
-0.35 1.57 0.25 1.3 1.09 0.97 0.61 0.44 0.11 0.99 -1.72 0.63 - -2.6 0.82 -2.79 -3.19 - - - - - -2.96 - - -1.44 2.48 2.08 - - -3.01 -3.12
-0.62 -2.04 -0.7 0.4 - - - -1.3 -1.12 -2.15 -1.06 -0.5 -1.84 1.03 -0.28 -1.8 0.65 -0.47 1.36 - - 1.29 0.39 0.35 2.05 0.17 1.8 - -1.02 0.07 0.37 0.98
-0.09 0.05 0.12 0.17 0.28 0.33 0.44 0.42 -0.02 -0.41 -0.6 -0.21 -0.15 -1.18 -0.91 -0.75 0.31 0.13 -0.21 0.34 - - -0.22 -0.7 -4.8 0.18 1.58 1.39 0.2 0.42 -0.06 -0.42
-2.21 -2.24 - - -0.36 - -0.56 - -0.16 -1.57 -2.17 - - -2.23 0.15 0.19 -2.0 - 2.69 - - - -0.05 -1.93 1.52 0.0 1.73 2.86 -1.98 0.7 0.29 -0.5
- - - - - - - - - - - - - - - - - - 2.96 - - - - - - - 4.6 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - 5.0 - - - - -
-3.2 -3.21 -1.89 -1.03 - -2.17 -3.21 0.2 1.05 0.54 -0.28 0.37 -2.87 -2.41 -0.96 - -1.36 0.27 2.29 - - - -0.68 -0.43 0.88 1.3 1.55 2.58 -0.79 -0.7 -1.06 -1.53
-2.37 -3.69 -1.35 - -0.77 0.53 1.49 0.98 -0.1 0.36 0.16 -0.92 - -2.74 -1.63 - -0.37 -1.44 0.53 - - - -0.7 - - -1.81 2.95 2.86 0.39 -1.25 - -
- - - - - - - - - - - - - - 2.5 - - - - - - - - - - 3.5 3.91 - - - - -
-1.84 - - - - - 0.45 -0.85 -0.15 1.56 0.39 1.65 - -0.53 - - -0.29 0.24 0.58 - - - - - - - 2.55 3.31 -0.41 -0.41 - -
- - - - - - - - - - - - - 2.22 - 2.17 - - 3.59 - - - - - - - 3.44 - - - - -
- - - - - - - - - - - - - - 1.93 - - - 2.54 - - - - - - - 4.06 - 2.51 - - -
-0.6 -25.8 -0.73 -3.2 -3.92 -1.03 -0.95 -0.12 0.28 -1.06 -1.26 -1.11 -2.1 -2.71 -0.41 -1.63 0.23 0.19 -0.58 0.62 - -0.71 0.04 -0.68 0.92 -0.2 2.19 2.33 0.66 0.67 0.48 -0.14
-0.44 -4.66 -1.47 -1.18 -2.8 0.62 0.74 0.41 0.39 -0.55 -1.02 -1.23 - -4.5 -2.35 2.2 -0.12 - -0.9 - - - -2.32 -2.4 -0.75 -1.18 2.53 2.21 0.52 1.21 -0.81 -1.46
-1.23 - -1.17 -1.25 0.8 1.51 -0.12 0.67 -1.66 -0.24 - 0.05 - - -0.99 - -0.08 - 1.09 - - - - -0.74 0.27 1.91 2.96 1.96 -1.75 - -1.79 -
- - - - - - - - - - - - - - 1.23 - - - 1.79 - - - - - - - 4.26 - 1.78 1.83 - -
- - - - - - - - - 0.6 - - - - - - - - 2.6 - 2.34 - 0.96 - - - 3.94 - 1.03 - - -
-0.65 -0.86 -0.09 - 0.93 - -0.85 - -0.1 0.92 - -0.79 - - - - -0.53 - 2.76 - - - - - - - 3.28 1.52 -0.81 -0.65 0.69 0.23
- - - - - -0.74 -2.53 -0.15 -0.62 -2.65 -0.69 -2.62 - -2.2 -3.09 0.03 -0.17 0.82 0.77 - - - -2.4 -1.51 -0.33 0.65 3.31 2.16 1.37 0.66 0.29 -1.58
-1.09 -2.44 -3.16 -1.67 - 1.37 1.91 1.43 0.26 1.03 -1.39 -0.87 - - -1.79 - -1.11 - -1.92 - - - -2.14 -1.62 0.6 - 3.58 0.82 -3.05 -1.38 -1.33 -
-0.3 -0.57 -1.81 -0.03 -0.87 -0.57 1.4 1.14 0.38 -0.42 0.37 -0.5 -2.59 - -1.05 -3.41 0.28 0.15 -0.92 - - - -0.91 -0.73 - 0.72 2.4 2.01 -0.71 0.77 -0.81 -0.88
0.76 - -0.98 0.38 -0.51 - - 0.04 - - -0.48 1.32 0.95 -0.78 2.18 0.18 - 1.09 1.23 - - - - -0.71 - - 2.86 - - 0.28 0.87 -
- - - - - - - - - - - - - - - 1.25 - - 3.09 - - - - - - - 2.77 3.59 - 1.16 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.