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Heatmap: Cluster_219 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
24.1 21.15 21.33 25.45 29.7 31.46 31.21 38.0 33.75 32.62 30.76 28.24 21.35 13.32 28.61 22.31 19.01 12.41 25.44 2.46 1.15 0.79 23.24 23.03 15.02 57.35 47.24 47.9 26.06 24.97 24.06 29.01
134.14 140.59 153.63 177.46 171.02 166.02 165.02 210.58 181.6 185.84 171.25 162.92 113.87 153.02 92.48 112.43 80.72 74.66 119.36 23.9 39.73 9.59 109.28 113.79 99.39 291.92 254.9 259.17 98.89 93.33 147.4 118.62
21.26 24.67 22.93 25.29 27.23 27.48 26.69 33.24 28.99 29.62 27.52 25.02 16.27 13.19 22.71 16.4 12.63 8.6 18.87 0.05 3.16 4.99 15.25 16.18 18.38 41.19 47.3 45.55 13.13 14.75 21.03 20.46
26.63 29.93 38.21 41.97 41.41 36.15 40.82 37.9 38.7 37.25 36.35 28.62 30.54 42.39 32.6 33.75 25.58 15.23 33.74 5.83 4.36 3.79 31.17 31.61 14.66 42.35 52.9 50.87 28.55 28.58 28.07 31.86
52.09 49.88 52.56 57.16 57.52 52.55 54.64 64.94 60.44 62.66 59.09 53.18 40.36 36.18 46.8 36.92 29.65 24.16 44.19 4.75 15.31 9.01 34.04 37.36 39.61 79.63 77.91 82.4 30.53 34.16 51.11 46.83
48.48 50.66 50.1 59.01 59.13 62.3 63.5 69.75 69.47 65.92 65.71 53.38 53.25 39.52 59.72 43.25 40.25 25.08 38.07 12.85 1.77 9.71 34.67 35.94 16.11 70.1 82.02 80.65 37.95 41.3 29.82 34.02
14.66 14.63 14.55 17.51 20.9 16.95 15.32 18.76 15.88 16.76 15.25 12.78 11.85 11.17 7.17 15.91 8.1 2.11 14.03 2.3 3.6 0.63 13.3 13.05 11.68 35.66 26.33 28.92 8.74 8.44 17.9 11.67
17.8 20.8 22.67 23.11 27.89 25.72 24.82 27.19 21.95 23.1 22.64 19.45 19.37 16.2 24.84 20.09 14.34 7.54 16.92 9.63 1.39 1.76 17.99 19.57 4.31 25.95 27.24 28.09 14.87 16.55 12.43 14.61
65.83 75.07 86.94 89.81 87.69 89.01 85.23 91.36 78.54 69.79 65.79 62.39 38.64 59.21 44.1 47.2 71.05 53.64 68.64 3.28 12.96 1.89 53.81 49.36 44.22 65.45 104.69 118.08 65.78 70.23 53.57 49.32
64.06 61.82 62.62 82.18 79.56 79.86 74.51 78.89 76.0 69.8 63.54 60.89 43.79 62.91 48.97 51.32 53.17 31.47 60.99 3.92 21.57 3.17 55.17 50.94 54.39 92.27 102.38 106.5 46.97 50.87 45.82 51.04
40.02 40.27 51.67 53.15 64.32 58.26 58.48 57.03 54.82 53.19 46.56 42.62 40.05 40.14 60.61 46.95 33.31 25.75 52.04 13.39 3.29 9.61 41.26 42.87 11.22 66.24 47.58 51.02 32.11 33.91 31.99 29.66
42.53 49.85 49.18 55.48 57.35 52.92 54.12 55.48 55.57 55.74 50.07 47.43 42.16 39.51 42.9 49.27 33.23 22.45 42.82 19.29 2.74 10.86 43.98 46.17 18.88 85.91 66.3 72.4 30.83 35.23 28.9 24.93
40.19 43.0 49.24 47.57 52.25 49.86 50.04 50.73 48.79 45.06 47.76 38.85 39.49 40.24 59.84 42.21 29.78 22.94 35.42 10.5 12.27 4.55 43.01 46.6 8.09 54.36 52.35 55.83 28.6 30.68 23.97 26.09
7.3 8.68 8.46 10.54 11.73 9.08 12.53 11.88 10.86 10.67 10.02 8.36 6.64 6.61 13.72 7.73 5.37 2.6 8.13 0.08 0.0 0.0 5.48 6.73 0.45 14.91 12.63 14.22 6.03 6.1 3.92 4.92
11.98 12.43 12.74 14.87 16.69 15.78 16.55 17.54 15.38 15.59 13.86 11.99 12.85 6.75 8.1 14.91 8.96 4.48 17.94 3.37 3.28 4.44 11.21 11.11 11.28 20.74 22.68 25.67 11.75 12.46 6.92 7.09
17.31 16.85 16.48 20.28 23.53 18.16 24.68 26.53 23.91 25.16 20.57 21.69 14.21 12.67 15.77 16.14 13.61 20.01 19.66 3.62 3.5 2.1 15.19 16.56 11.89 36.67 27.44 28.02 18.48 20.02 12.34 13.8
40.24 40.5 47.24 51.36 59.8 58.02 65.76 74.91 66.1 66.1 62.33 52.93 46.36 29.32 37.26 49.68 42.51 36.02 51.33 8.13 14.61 3.67 45.78 46.4 55.61 85.65 77.17 85.08 51.73 49.44 45.17 39.85
10.39 9.78 11.74 11.39 12.75 12.35 10.41 11.16 11.26 10.96 9.72 9.02 10.56 8.22 12.3 11.52 6.28 4.6 10.08 5.83 2.21 4.42 8.45 9.39 6.5 12.33 12.65 13.89 6.51 6.8 8.13 8.87
44.41 46.59 49.28 54.5 59.93 56.84 60.62 69.57 62.96 59.29 57.35 54.45 41.13 42.1 55.62 46.24 38.74 35.3 54.96 13.16 25.59 15.97 41.66 42.12 58.46 112.74 109.89 99.85 40.94 41.58 50.97 52.7
18.69 18.51 20.31 23.68 25.28 24.73 27.12 31.83 28.67 28.44 25.26 22.5 14.47 14.26 20.4 15.92 13.47 8.29 21.17 6.56 6.86 3.91 13.81 15.1 14.19 33.13 37.29 38.06 16.27 17.54 18.34 20.36
59.43 59.48 61.15 68.89 65.13 67.93 74.3 82.83 78.75 74.86 68.61 66.95 44.58 53.47 44.14 43.71 39.02 29.09 46.25 9.31 31.94 6.51 41.86 39.22 64.61 114.57 126.92 118.88 43.75 43.05 52.76 51.57
24.19 26.04 26.86 26.21 26.46 27.55 28.25 29.05 27.61 30.52 27.48 26.06 19.82 17.98 18.91 20.26 12.36 10.64 24.31 7.42 9.27 7.17 14.05 15.02 15.6 41.62 38.62 39.83 15.36 16.16 15.0 17.1
55.44 55.13 69.07 71.64 77.9 84.96 88.93 97.86 91.31 82.46 78.26 68.9 72.03 50.78 86.17 71.72 54.21 39.73 69.09 10.74 25.04 24.8 63.19 70.26 60.91 116.82 95.07 102.54 61.27 65.31 38.4 29.83
44.08 39.95 42.28 57.92 65.98 62.1 70.8 80.75 67.23 64.65 58.54 50.79 42.35 34.54 23.08 55.32 33.06 10.64 66.44 1.22 7.96 1.6 42.93 39.31 16.97 112.08 95.93 94.9 43.97 43.98 54.24 54.53
5.59 4.46 5.02 6.39 8.85 8.91 9.7 10.16 9.27 7.7 7.23 6.64 3.88 2.63 5.64 5.33 3.94 1.68 6.04 0.38 1.1 2.89 3.8 4.45 2.07 16.77 14.69 15.53 5.08 6.28 3.61 4.12
44.32 44.34 50.84 55.45 61.56 61.59 65.38 69.9 60.64 55.45 55.76 46.63 21.73 23.18 23.41 27.19 30.89 19.96 31.98 13.13 10.75 20.56 28.89 26.87 26.74 77.87 106.64 110.09 29.51 30.34 27.39 27.33
22.0 26.7 36.46 42.29 46.57 47.21 49.04 48.79 44.93 40.92 36.24 27.83 10.7 10.61 30.59 11.55 33.98 18.23 15.03 3.48 2.37 6.01 17.76 13.95 9.78 42.89 61.85 57.14 21.53 23.58 32.22 33.02
93.84 82.79 85.82 118.41 130.94 130.81 146.42 161.91 140.81 143.16 122.87 121.15 77.06 117.35 90.89 93.77 71.13 29.18 121.96 7.03 13.71 5.59 78.25 72.43 50.98 192.45 191.03 199.22 84.09 87.72 86.13 82.46
90.91 79.78 73.31 85.1 78.58 79.71 76.92 94.69 99.58 103.25 104.61 97.53 62.02 108.82 75.86 78.28 57.11 41.82 75.75 29.1 16.99 17.22 67.77 75.99 64.42 163.52 158.51 152.87 63.66 64.63 87.16 76.69
17.98 17.29 19.07 20.01 21.82 20.29 19.14 18.93 16.77 16.96 15.36 14.85 13.22 11.63 16.02 16.71 13.68 7.95 21.78 0.85 0.67 0.95 15.0 15.5 9.71 32.08 24.61 25.48 13.34 13.49 15.18 13.78
15.24 16.85 17.9 19.18 22.85 20.43 20.77 25.99 21.77 20.75 20.06 16.37 18.82 10.43 8.72 22.06 13.24 6.52 21.46 1.05 1.74 0.37 19.06 21.37 19.2 41.42 30.39 31.5 17.84 18.42 22.48 18.78
44.45 43.09 41.81 44.51 47.56 41.56 40.69 45.9 40.88 41.62 41.17 39.81 28.34 28.87 36.62 32.69 25.84 20.33 36.17 13.25 26.3 1.2 26.58 28.91 12.03 83.85 80.52 86.62 27.6 27.45 24.89 23.87
45.42 52.39 50.86 53.38 53.52 46.48 55.3 50.63 50.18 50.47 49.89 44.23 37.56 49.55 61.72 48.71 32.83 17.88 41.19 21.19 5.39 1.26 32.4 30.84 10.49 47.79 63.48 65.45 32.81 35.8 37.96 41.35
15.62 18.81 18.33 24.92 26.55 24.9 31.01 30.72 28.36 24.35 21.27 19.89 15.72 15.11 23.72 20.33 13.45 7.97 17.71 0.0 0.0 0.76 16.71 17.3 1.63 20.66 36.6 34.48 16.33 18.62 11.48 11.0
65.5 59.23 59.02 65.53 70.8 73.2 78.26 74.14 67.67 70.68 58.76 62.17 59.42 54.81 78.4 69.21 41.91 28.87 61.01 14.52 9.34 7.76 56.8 61.55 29.25 79.22 87.53 82.23 47.72 49.17 40.15 39.09
100.01 94.94 108.6 105.36 118.97 116.34 111.9 113.14 114.09 106.52 105.64 102.57 73.73 70.71 98.83 94.13 67.45 58.97 83.16 3.68 2.49 10.09 83.48 85.92 43.55 181.88 138.93 158.49 72.57 72.91 48.17 46.13
43.66 49.99 50.33 54.69 48.18 51.19 63.38 70.7 63.92 70.45 65.44 58.07 38.03 28.06 22.65 37.61 37.27 21.5 63.79 0.87 0.24 0.0 44.33 48.76 3.51 112.07 82.66 94.58 53.06 53.37 38.88 37.61
119.84 124.08 134.51 154.47 151.66 134.15 117.55 124.06 116.38 112.73 113.59 104.69 85.29 92.97 93.18 110.86 95.96 64.04 125.38 41.94 36.26 15.38 103.39 96.3 71.14 199.92 192.09 213.23 84.19 89.31 76.04 82.49
15.35 17.45 19.64 19.34 21.12 18.25 19.02 18.29 19.3 18.86 18.75 16.43 14.28 10.73 22.69 15.0 12.15 5.97 16.0 14.19 2.84 9.46 11.4 12.14 5.55 16.12 18.75 21.63 12.52 13.66 11.75 11.85
82.04 88.57 102.12 126.25 127.38 118.62 142.68 149.02 141.52 132.16 125.7 116.38 110.8 108.09 95.81 99.18 85.01 49.48 71.58 12.46 27.31 8.4 89.93 95.82 41.48 160.66 145.68 162.13 90.01 93.65 87.4 74.82
37.73 40.49 39.78 44.55 45.88 42.07 46.8 46.12 45.99 45.87 41.36 41.13 25.13 37.87 33.61 28.56 35.46 23.05 38.46 13.83 10.73 5.26 31.23 30.15 39.27 47.79 61.59 69.06 32.85 32.93 28.96 28.5
13.65 13.84 15.09 13.72 13.62 15.25 14.54 15.71 13.43 13.35 13.41 12.21 10.84 13.26 18.89 12.66 9.37 10.93 10.2 3.09 1.76 0.44 12.66 10.89 3.4 14.28 18.78 23.74 9.95 10.36 7.61 7.68
8.02 8.28 7.92 11.22 10.26 9.66 9.67 10.17 10.23 10.3 10.83 8.99 6.02 7.54 6.84 6.4 6.59 6.1 10.14 2.39 0.95 0.0 6.8 7.03 6.55 12.86 14.53 14.14 6.33 7.24 3.98 3.88
11.17 10.17 12.72 14.4 17.67 21.75 19.39 21.62 18.97 18.83 16.52 12.61 6.54 10.21 13.71 7.86 10.44 7.01 11.86 1.42 2.36 0.33 8.82 7.9 9.53 17.81 21.72 22.27 9.85 9.59 11.85 9.08
118.45 122.04 125.48 143.68 154.98 159.74 172.42 182.29 164.64 165.96 149.73 144.68 108.36 143.22 141.19 118.37 105.87 73.07 110.62 22.56 37.14 25.35 108.77 112.84 99.75 174.59 200.28 226.21 114.15 117.42 90.67 59.49
24.41 24.17 28.46 33.44 29.87 29.36 26.14 27.77 25.89 25.62 25.44 22.97 20.9 20.89 14.16 28.11 16.73 10.74 27.27 0.47 1.04 0.07 22.27 22.56 4.26 57.96 38.1 42.95 16.93 16.12 29.07 20.7
25.42 24.62 26.35 29.21 29.87 26.04 29.03 35.48 32.77 37.3 35.05 32.54 22.14 17.05 16.03 28.51 19.91 10.32 28.85 0.08 9.3 5.29 20.69 19.87 13.51 57.06 36.0 38.09 28.07 29.35 27.16 27.16

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)