Heatmap: Cluster_317 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.33 1.09 0.52 -0.08 0.68 1.2 0.53 0.17 0.12 0.27 0.07 -0.77 -2.68 -3.68 1.24 -0.12 0.15 -4.46 0.34 -1.99 - 0.31 -0.84 -2.06 -0.92 0.3 0.23 0.4 -0.03 0.39 -1.12 -0.7
0.3 -1.25 1.85 0.34 -0.16 1.63 0.26 0.77 0.98 0.63 0.88 -1.35 -1.25 0.14 1.91 -2.13 -3.36 -2.78 -2.23 -2.21 -1.69 1.32 -3.56 -1.47 - 0.2 -10.34 1.04 -3.26 -3.09 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.