Heatmap: Cluster_49 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00265620 (evm_27.TU.AmTr_v1.0_scaffold00001.404)
- - - 0.7 1.86 - -3.44 - -2.94 -4.99 0.59 0.4 0.55 0.18 0.83 -0.16 -1.73 0.21 0.7 0.26 1.64 0.0
AMTR_s00001p00271150 (evm_27.TU.AmTr_v1.0_scaffold00001.478)
- - - 2.71 0.75 - - - -1.36 - - - - - -1.58 - - - - - 3.71 -
AMTR_s00001p00272560 (evm_27.TU.AmTr_v1.0_scaffold00001.540)
- - - 1.09 -1.24 - - - - - - - - - -0.1 - - - - - 4.21 -
AMTR_s00001p00272670 (evm_27.TU.AmTr_v1.0_scaffold00001.551)
1.31 - - 1.79 1.77 - -3.66 0.11 -2.38 -3.11 -0.29 0.87 0.61 0.3 -2.32 - -2.12 -0.32 - -0.04 1.84 -
AMTR_s00003p00251050 (evm_27.TU.AmTr_v1.0_scaffold00003.296)
- - - 1.16 1.0 - -2.59 -0.75 - - - - 0.31 - -2.87 - - - - - 3.97 -
AMTR_s00003p00271700 (evm_27.TU.AmTr_v1.0_scaffold00003.466)
- - -0.71 1.59 -1.15 - -2.9 - -0.8 -1.58 -0.82 0.05 0.21 -0.5 -0.45 - -2.09 - -1.3 0.58 3.29 -0.33
AMTR_s00004p00269340 (evm_27.TU.AmTr_v1.0_scaffold00004.280)
- - - - 2.44 - - - - -3.45 - - -1.1 -3.23 -1.99 - -0.96 0.99 - -2.39 3.64 -1.01
- - - - 2.91 - -3.47 - -1.21 -0.82 -0.64 - -1.0 -0.61 -0.19 -0.42 0.33 - - 0.05 2.79 -0.46
AMTR_s00009p00263210 (evm_27.TU.AmTr_v1.0_scaffold00009.356)
- - - - 2.21 - - - -1.05 -2.37 - 2.53 -1.44 -1.96 0.03 - - - - - 3.18 -2.06
AMTR_s00010p00220070 (evm_27.TU.AmTr_v1.0_scaffold00010.231)
- - - 1.89 0.52 - -4.35 - -2.97 -3.8 -0.05 - -2.12 -2.24 -0.39 - -0.19 - -1.15 -2.74 3.67 -1.95
AMTR_s00011p00108390 (evm_27.TU.AmTr_v1.0_scaffold00011.32)
- - - 1.86 -0.73 - -4.25 - -0.87 -2.7 - 2.14 0.1 -0.17 -0.94 - -1.43 - - -2.04 3.21 -1.89
AMTR_s00011p00232500 (evm_27.TU.AmTr_v1.0_scaffold00011.112)
- - - 0.96 2.95 - - 1.3 - -5.02 - - -4.06 - -5.1 - - - - -3.59 3.26 -3.71
AMTR_s00012p00032410 (evm_27.TU.AmTr_v1.0_scaffold00012.5)
- - - - 3.12 - - - - - - - -0.22 - -2.72 - - - 1.19 0.36 3.01 -0.54
AMTR_s00014p00223250 (evm_27.TU.AmTr_v1.0_scaffold00014.82)
- - - 1.04 2.76 - - - - - - - -3.72 -3.31 -1.47 - - - - -2.5 3.64 -
- - - - 3.22 - - - -3.43 - - - -3.59 - -3.97 - - - - - 3.64 -
AMTR_s00016p00217150 (evm_27.TU.AmTr_v1.0_scaffold00016.193)
- - - - 2.6 - - - -3.17 -2.2 - 1.37 -3.09 -3.32 0.31 - 0.23 - - - 3.35 -2.14
AMTR_s00017p00186120 (evm_27.TU.AmTr_v1.0_scaffold00017.104)
- - - 0.86 0.49 - -2.39 - -2.56 -1.71 -0.27 -0.83 0.17 -1.04 -0.61 -0.39 -0.49 -1.02 -0.47 1.26 3.07 -0.03
AMTR_s00019p00227930 (evm_27.TU.AmTr_v1.0_scaffold00019.298)
- - - - 3.36 - - - - - - - - - - - -0.11 - - - 3.26 0.24
AMTR_s00019p00244510 (evm_27.TU.AmTr_v1.0_scaffold00019.369)
- - - - 3.43 - - - - - - - - -0.86 -2.29 - - - - -0.23 3.26 -
AMTR_s00020p00052850 (evm_27.TU.AmTr_v1.0_scaffold00020.23)
- - 1.52 -0.4 1.97 - - - -5.27 - -0.73 0.05 -1.41 -3.87 -0.69 - - 0.86 - -0.45 3.17 -2.34
AMTR_s00027p00221270 (evm_27.TU.AmTr_v1.0_scaffold00027.91)
- - - 0.49 2.64 - -2.11 - -0.01 -1.71 -0.53 - -2.08 0.56 -0.14 - - 1.06 -0.1 -0.99 2.49 -1.26
AMTR_s00029p00228930 (evm_27.TU.AmTr_v1.0_scaffold00029.361)
- - 1.17 - 2.64 - -6.89 -5.72 -4.5 -6.11 0.24 0.1 0.68 0.19 -1.11 -0.29 0.04 -0.09 -0.66 -0.43 1.71 -0.83
AMTR_s00032p00197810 (evm_27.TU.AmTr_v1.0_scaffold00032.180)
- - - 1.72 2.33 - - -1.63 - - - - -3.78 - -2.13 - 0.7 - - -2.12 3.49 -
AMTR_s00032p00225850 (evm_27.TU.AmTr_v1.0_scaffold00032.239)
- - 1.36 - 2.3 - - - -1.98 - -0.54 - -1.32 -0.65 -2.58 0.59 - - - -0.85 3.22 -0.04
AMTR_s00033p00001260 (evm_27.TU.AmTr_v1.0_scaffold00033.1)
- - - -0.57 3.24 - - -0.7 - - - - -2.14 -1.57 0.46 - - - - - 3.23 -
AMTR_s00033p00075560 (evm_27.TU.AmTr_v1.0_scaffold00033.31)
- - - 2.04 1.37 - - - - - - - - - 1.44 - - - - - 3.65 -
AMTR_s00039p00065940 (evm_27.TU.AmTr_v1.0_scaffold00039.26)
- - - - 3.05 - - - 0.2 - - - - -0.01 1.82 - - - - -0.32 2.73 -0.69
AMTR_s00042p00039800 (evm_27.TU.AmTr_v1.0_scaffold00042.11)
- - - 2.09 1.4 - - - - - - - - -2.38 - - - - - - 3.9 -
AMTR_s00042p00226400 (evm_27.TU.AmTr_v1.0_scaffold00042.76)
- - - 0.92 2.83 - - - - - -0.24 - - - -0.84 - - - - -2.69 3.51 -
AMTR_s00045p00204340 (evm_27.TU.AmTr_v1.0_scaffold00045.269)
- - - - 3.25 - - - - - 0.08 - 0.24 -2.53 -0.65 - - 1.76 - - 2.6 -
AMTR_s00047p00216220 (evm_27.TU.AmTr_v1.0_scaffold00047.161)
- - - 1.87 0.78 - -3.54 - -1.23 -2.43 0.62 - -0.68 -0.15 -0.86 -1.71 0.26 1.25 0.62 0.17 2.41 -1.2
AMTR_s00050p00064630 (evm_27.TU.AmTr_v1.0_scaffold00050.13)
- -3.08 -1.43 -1.3 2.22 -1.76 -1.22 -2.33 -0.68 -0.87 0.09 0.03 0.51 0.17 -0.17 -0.86 0.15 -0.03 -0.08 -0.09 1.8 -0.32
AMTR_s00058p00060870 (evm_27.TU.AmTr_v1.0_scaffold00058.28)
- - -2.65 2.14 -0.77 - - - - - - - -1.69 -0.06 -4.75 -0.13 - 1.83 - -3.59 3.41 -1.44
AMTR_s00060p00159970 (evm_27.TU.AmTr_v1.0_scaffold00060.98)
- 1.12 - 1.47 2.86 - - - -4.14 - -0.33 - -1.66 -2.65 -0.97 - - - -0.92 - 2.89 -
AMTR_s00061p00168280 (evm_27.TU.AmTr_v1.0_scaffold00061.173)
- - - 1.53 0.64 - -3.06 0.24 -3.47 -2.05 -2.29 -2.12 -4.12 -2.91 -1.0 - -1.42 - -3.47 -3.25 3.73 -0.02
AMTR_s00062p00154490 (evm_27.TU.AmTr_v1.0_scaffold00062.142)
- - - - 3.35 - - - - -0.71 - - -1.04 -1.01 -1.73 - 1.28 - - - 2.91 -
AMTR_s00062p00192830 (evm_27.TU.AmTr_v1.0_scaffold00062.201)
- - - - 2.09 - -1.43 - - - - - -0.6 - -0.37 - - - - - 3.99 -
AMTR_s00063p00206790 (evm_27.TU.AmTr_v1.0_scaffold00063.82)
- - - - 2.84 - - - - - - - - - - - - - - - 3.89 -
AMTR_s00070p00078410 (evm_27.TU.AmTr_v1.0_scaffold00070.34)
- - - 1.21 2.56 - - - -0.73 -1.6 - - -1.41 - 1.35 - 1.11 - - - 2.9 -1.62
AMTR_s00070p00081870 (evm_27.TU.AmTr_v1.0_scaffold00070.37)
- - - -1.45 2.48 - -1.23 - -2.2 0.45 -0.43 -0.17 -0.23 -1.55 0.04 - -0.67 - -1.34 -1.71 2.8 0.93
AMTR_s00071p00178710 (evm_27.TU.AmTr_v1.0_scaffold00071.181)
- - - - 3.1 - - - - - - - -0.24 - - - - - - - 3.65 -
AMTR_s00085p00170850 (evm_27.TU.AmTr_v1.0_scaffold00085.107)
- - - - 2.68 - - - - - - - - - - - - - - -1.02 3.92 -
AMTR_s00087p00019180 (evm_27.TU.AmTr_v1.0_scaffold00087.3)
-0.97 -0.17 0.15 0.57 1.43 -3.56 -1.91 - -1.96 -1.84 0.66 0.11 0.17 0.31 0.51 -0.33 -1.16 -0.63 0.44 -0.21 1.61 -0.29
AMTR_s00097p00140040 (evm_27.TU.AmTr_v1.0_scaffold00097.38)
- - - 1.52 0.93 - 0.12 - -1.26 -1.02 -0.38 - -1.08 -2.36 -1.72 - -0.04 - -1.0 -1.07 3.47 -1.09
AMTR_s00100p00049190 (evm_27.TU.AmTr_v1.0_scaffold00100.7)
- - - - 2.07 - -0.73 - -0.83 0.08 - - -2.19 -1.3 0.29 - 0.38 - - - 3.6 -1.59
AMTR_s00101p00073470 (evm_27.TU.AmTr_v1.0_scaffold00101.48)
0.09 - - 0.95 1.38 - -2.52 - -2.63 -2.23 0.27 - 0.05 -0.64 -1.84 -0.46 -0.95 0.92 - -1.28 3.12 -1.13
AMTR_s00103p00103200 (evm_27.TU.AmTr_v1.0_scaffold00103.56)
- - - - 2.92 - - - - - - - - - - - - - - - 3.85 -
AMTR_s00113p00130020 (evm_27.TU.AmTr_v1.0_scaffold00113.29)
- - - 0.86 2.75 - -6.49 -5.09 -7.97 -5.68 0.64 0.68 -1.25 -3.22 0.74 -0.89 0.61 0.12 -0.41 -1.09 1.74 -1.7
AMTR_s00119p00130560 (evm_27.TU.AmTr_v1.0_scaffold00119.103)
- - - 0.85 2.68 - -3.3 - -3.01 -2.09 - - 0.34 -0.72 -0.18 -0.21 0.34 0.17 - -0.23 2.59 -1.25
AMTR_s00122p00092210 (evm_27.TU.AmTr_v1.0_scaffold00122.37)
- - - 2.41 -1.38 - - - - - - - - -1.21 - - - 1.89 0.73 - 3.32 -0.9
AMTR_s00124p00123500 (evm_27.TU.AmTr_v1.0_scaffold00124.28)
- - - - 1.42 - -4.33 - 0.52 -0.81 -1.2 -0.45 -5.05 -2.07 -0.22 - -0.51 0.94 -0.1 0.35 3.28 -1.26
AMTR_s00128p00106650 (evm_27.TU.AmTr_v1.0_scaffold00128.35)
- - - - 3.32 - - - - - - - - -2.78 1.41 - - - - -0.56 3.09 -
AMTR_s00132p00053560 (evm_27.TU.AmTr_v1.0_scaffold00132.13)
- - - - 3.05 - -3.48 - -2.21 -2.07 -1.53 - -0.99 -2.06 -0.05 - -0.3 - -0.91 -2.43 3.23 -2.47
AMTR_s00132p00114970 (evm_27.TU.AmTr_v1.0_scaffold00132.28)
- - - - 2.99 - - - -2.66 - 0.55 - -1.15 -2.33 -0.75 - 1.3 - - -2.34 3.01 -1.11
AMTR_s00134p00027390 (evm_27.TU.AmTr_v1.0_scaffold00134.4)
- - - - 2.83 - - - - -4.56 - - -3.27 -4.08 -1.87 - - - - -1.37 3.81 -
AMTR_s00136p00054180 (evm_27.TU.AmTr_v1.0_scaffold00136.16)
- - - 0.68 2.18 - - -0.37 - - - 2.46 -0.93 - -1.26 - - - - - 3.11 -
AMTR_s00137p00030430 (evm_27.TU.AmTr_v1.0_scaffold00137.6)
- - - - 2.82 - - - -2.13 -1.68 - - -1.55 -0.89 -1.0 - - - - - 3.67 -2.03
AMTR_s00141p00055890 (evm_27.TU.AmTr_v1.0_scaffold00141.13)
- - - - 1.63 - -3.19 - -2.32 -3.0 -0.1 - 0.71 -0.93 0.46 - - 1.45 - -0.85 3.3 -0.2
AMTR_s00145p00048450 (evm_27.TU.AmTr_v1.0_scaffold00145.11)
- - - 1.4 2.27 - - - - - - - -0.7 -1.29 1.98 - - - - - 3.26 -
AMTR_s00153p00081300 (evm_27.TU.AmTr_v1.0_scaffold00153.46)
- - - - 2.68 - -1.67 - -0.06 -0.1 - - - -1.71 -0.55 - - - - - 3.5 0.12
AMTR_s00161p00055510 (evm_27.TU.AmTr_v1.0_scaffold00161.20)
- - - 2.58 0.49 - - - - - - - -0.63 - - - - - - - 3.81 -
AMTR_s00171p00035350 (evm_27.TU.AmTr_v1.0_scaffold00171.12)
- - - - 2.77 - - - - - - - -2.52 0.65 -3.31 - - - - - 3.74 -
AMTR_s00175p00026100 (evm_27.TU.AmTr_v1.0_scaffold00175.4)
- - - 1.91 0.73 - - - - - - - -0.78 -0.57 -3.46 - -0.16 - - - 3.8 -1.15
AMTR_s00177p00034620 (evm_27.TU.AmTr_v1.0_scaffold00177.12)
- - - 0.31 2.96 - - - - - - - -3.65 - - - -0.99 - - -1.98 3.6 -
AMTR_s00236p00018010 (evm_27.TU.AmTr_v1.0_scaffold00236.3)
- - - 2.14 2.11 - - - - - - - -1.05 - -2.62 - -0.73 - - - 3.59 -
AMTR_s00334p00014280 (evm_27.TU.AmTr_v1.0_scaffold00334.7)
-3.8 -2.76 -2.7 1.86 -1.03 - - -2.15 -9.95 -8.01 -8.39 - -6.47 -5.91 -5.16 -4.49 -4.59 - -5.43 -2.92 4.08 -6.59
AMTR_s00841p00011080 (evm_27.TU.AmTr_v1.0_scaffold00841.1)
- - - - 2.7 - - - - - - - 0.05 - -0.9 - - - - 0.26 3.55 -0.01
- - - - 2.98 - - 1.11 -1.37 -0.77 - - - -0.87 - - - - - - 3.38 -
AMTR_s05095p00005390 (evm_27.TU.AmTr_v1.0_scaffold05095.1)
- - - - 2.52 - -1.06 - -2.36 -1.26 - - -1.09 - -0.81 - - - - 0.23 3.65 -1.38
AMTR_s05122p00004450 (evm_27.TU.AmTr_v1.0_scaffold05122.1)
- - - 1.21 - - - - - - 0.08 1.27 - - -1.91 - -0.72 - - -3.89 3.93 -
- 0.12 - 1.38 2.25 -1.84 -4.32 1.82 -2.2 -2.6 -1.64 -0.47 -1.33 -0.85 -1.69 -2.03 -2.45 -1.66 -2.64 -0.73 2.35 -1.33
AMTR_s05407p00004870 (evm_27.TU.AmTr_v1.0_scaffold05407.2)
- 0.07 - 1.71 1.17 - -6.19 1.05 - -5.84 -0.99 - -2.05 -2.56 -1.45 - -1.05 -1.69 - -1.5 3.41 -1.78
AMTR_s05677p00004180 (evm_27.TU.AmTr_v1.0_scaffold05677.2)
- -5.05 - 2.32 -1.29 - -6.82 0.66 -6.17 -7.74 -3.53 -1.75 -3.75 -4.91 -1.44 - - - - -2.71 3.79 -3.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.