Heatmap: Cluster_184 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.01 0.06 0.04 0.02 0.02 0.05 0.03 0.13 0.01 0.04 0.09 0.05 4.2 0.94 0.07 15.2 0.02 0.0 0.16 0.0 0.0 0.0 0.02 0.06 0.0 0.03 0.04 0.0 0.0 0.07 0.02 0.0
2.49 1.25 1.6 1.07 2.17 3.71 3.19 3.8 4.08 3.28 3.02 2.17 1.18 4.47 3.19 8.77 1.38 4.25 5.4 2.31 20.84 1.79 1.51 2.76 3.69 8.18 13.32 8.61 3.23 3.96 3.48 3.82
1.18 0.64 1.13 1.59 1.14 0.65 1.19 1.53 1.04 0.92 0.76 1.05 1.36 3.05 1.81 7.45 0.05 0.08 1.04 0.0 0.0 0.0 0.0 0.34 2.05 0.0 0.71 0.27 0.09 0.29 0.02 0.32
0.95 1.07 1.62 1.47 1.2 1.46 1.05 1.54 0.93 1.55 1.47 0.94 9.72 1.24 1.79 14.2 0.27 0.3 3.0 0.0 1.09 0.46 1.04 1.86 4.2 5.58 2.86 0.76 1.05 1.04 1.7 0.38
0.34 1.2 1.3 0.83 0.82 0.67 1.44 1.03 0.66 0.22 0.42 0.7 4.96 4.55 0.12 71.26 1.86 18.46 27.88 0.44 3.65 1.14 0.56 6.56 1.32 47.73 48.92 14.82 10.95 9.14 31.28 23.69
5.89 6.16 6.51 5.33 7.31 5.87 5.86 7.05 7.05 6.9 6.98 5.68 20.13 24.13 12.1 59.1 4.52 6.13 20.08 2.96 0.93 0.0 3.93 11.75 8.49 9.2 10.75 14.95 6.24 10.09 2.66 3.34
8.41 7.51 7.66 10.02 9.42 9.99 8.74 12.16 15.72 14.19 16.24 12.77 27.66 16.56 8.89 60.12 4.09 0.96 4.66 0.11 0.0 1.59 7.15 7.99 2.75 14.05 5.55 5.07 5.18 6.61 5.16 6.66
5.16 6.36 5.52 4.56 6.8 4.66 5.43 6.07 8.19 5.63 7.49 6.53 3.2 10.27 0.02 63.52 10.57 7.22 30.34 0.0 0.0 0.0 4.62 18.59 0.84 18.9 16.08 7.12 12.83 19.14 6.87 23.72
4.34 4.87 4.2 5.85 6.99 9.52 8.13 6.66 6.4 3.76 4.12 5.4 61.51 120.46 60.38 376.85 17.7 302.76 162.84 55.15 29.67 1.31 13.98 64.26 6.45 34.42 149.11 37.52 67.83 71.25 54.36 112.32
57.53 54.82 51.56 58.94 72.41 63.04 43.94 40.48 49.73 51.71 40.67 37.27 136.79 53.94 11.13 216.41 28.78 18.43 30.89 4.98 19.75 0.4 23.24 27.67 11.49 24.01 21.16 31.71 31.94 29.84 21.15 21.07
4.18 8.81 4.09 6.53 8.26 5.93 7.75 21.87 15.48 22.12 14.39 12.84 143.46 12.54 9.17 251.41 10.8 17.56 24.37 0.03 7.35 0.15 5.24 9.95 1.92 20.06 4.97 4.21 17.2 15.48 8.29 10.05
28.16 16.77 17.55 19.04 15.45 15.75 14.99 16.39 26.87 28.6 34.1 37.46 91.24 25.62 14.24 213.04 6.37 1.24 6.7 6.41 2.02 9.3 13.9 17.1 38.0 37.23 17.42 14.67 9.51 12.63 10.18 13.34
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.61 0.0 0.0 19.0 0.0 0.0 1.15 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.64 0.66 0.61
2.65 2.26 1.69 2.36 3.34 2.12 2.9 3.49 2.65 4.44 3.29 2.33 32.82 10.63 3.83 58.21 3.6 2.64 21.69 0.0 0.36 0.0 12.93 12.29 0.83 8.24 4.59 4.97 6.79 5.25 4.22 3.58
14.67 14.37 17.52 16.14 32.37 14.44 17.62 29.06 26.17 19.03 30.02 21.0 361.5 156.04 37.88 597.69 15.85 261.66 605.81 262.12 639.67 124.4 21.71 84.97 27.58 144.62 358.26 71.02 129.68 125.52 315.17 377.17
0.02 0.08 0.02 0.02 0.0 0.03 0.03 0.01 0.01 0.02 0.01 0.06 0.18 0.0 0.02 0.53 0.05 0.04 0.25 0.0 0.0 0.0 0.0 0.05 0.04 0.02 0.02 0.0 0.02 0.12 0.04 0.01
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.13 0.31 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.05 0.0 0.05
0.63 0.68 0.18 0.6 0.29 0.61 0.76 0.46 0.3 0.19 0.73 0.45 4.7 7.12 0.86 15.81 0.29 1.29 2.02 0.0 0.0 0.0 0.08 0.36 0.0 1.07 1.09 0.2 0.65 0.6 0.39 0.49
0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.43 0.57 0.25 2.96 0.0 0.16 0.0 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.27 0.0 0.0 0.0 0.0
10.25 2.25 3.39 4.51 2.23 9.87 4.54 4.24 3.16 3.03 3.52 4.25 16.2 14.39 2.23 64.09 2.26 1.28 5.86 0.0 4.22 0.0 3.0 4.04 22.97 1.79 0.0 0.0 2.9 1.87 2.35 3.61
37.83 26.89 23.52 28.83 40.62 32.05 22.96 31.0 44.91 50.25 48.97 37.4 134.23 39.59 51.69 192.2 0.33 0.19 3.07 0.0 0.33 0.0 0.69 7.44 8.14 53.21 3.21 5.6 1.92 5.24 1.36 3.51
0.47 0.07 0.18 0.33 0.19 0.37 0.47 0.67 0.19 0.36 0.42 0.19 1.22 2.94 0.76 4.35 0.16 0.36 0.26 0.0 0.06 1.49 0.05 0.11 0.46 0.42 1.35 1.08 0.3 0.29 0.13 0.1
0.15 0.0 0.0 0.18 0.0 0.0 0.0 0.21 0.13 0.23 0.38 0.52 2.31 2.43 1.93 5.17 0.03 0.0 0.03 0.6 0.0 0.77 0.03 0.13 0.0 0.91 0.0 0.21 0.03 0.19 0.0 0.0
0.1 0.65 0.28 0.4 0.0 0.29 0.33 0.0 0.09 0.15 0.29 0.17 0.27 0.66 1.57 11.12 0.09 4.04 10.82 0.0 3.2 0.0 0.25 1.48 0.39 0.37 1.08 1.31 1.34 1.97 2.21 6.42
2.27 1.09 1.2 1.04 1.58 0.89 1.05 1.45 1.21 1.29 1.13 1.78 0.85 0.27 0.33 8.69 2.16 2.25 3.75 0.64 0.0 0.0 1.03 2.3 0.56 0.76 0.46 0.72 1.75 2.57 0.64 0.43
0.21 0.12 0.31 0.3 0.11 0.32 0.28 0.04 0.26 0.06 0.19 0.27 0.44 0.04 0.14 2.44 0.07 0.03 0.17 0.08 0.12 0.12 0.17 0.22 0.2 0.05 0.13 0.04 0.04 0.14 0.13 0.19
0.05 0.06 0.2 0.32 0.21 0.16 0.04 0.12 0.13 0.12 0.0 0.2 0.25 0.32 0.16 2.14 0.04 0.22 2.37 0.0 0.45 0.0 0.27 0.55 1.12 0.57 0.0 0.0 0.59 0.58 1.28 1.08
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.14 0.0 0.31 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
18.8 17.7 17.89 16.29 18.47 16.09 16.27 14.03 16.79 16.38 18.29 17.39 16.73 27.19 12.89 34.84 9.27 14.98 21.54 6.37 41.0 20.83 10.05 17.05 16.18 29.42 26.74 14.32 13.27 14.31 14.38 16.14
0.06 0.12 0.1 0.1 0.0 0.0 0.12 0.04 0.22 0.0 0.44 0.08 0.29 0.96 0.57 2.29 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09 0.13 0.0 0.0
0.02 0.0 0.0 0.0 0.02 0.02 0.0 0.0 0.02 0.04 0.0 0.0 0.04 0.08 0.0 0.23 0.01 0.0 0.09 0.0 0.04 0.0 0.02 0.0 0.0 0.08 0.08 0.0 0.0 0.0 0.0 0.0
1.11 0.51 0.63 0.96 0.4 0.56 0.54 0.19 1.85 2.04 0.34 0.68 9.68 6.58 3.34 20.1 0.08 0.42 0.38 0.0 0.0 0.0 0.0 0.6 0.0 0.33 0.41 0.0 0.07 0.7 0.08 0.51
1.19 1.49 2.01 1.93 3.06 3.08 3.4 2.78 2.36 3.27 3.67 2.15 35.45 39.94 18.66 152.31 6.4 42.01 89.31 3.74 86.04 24.51 3.15 29.49 5.42 48.47 42.24 15.55 28.99 26.29 32.97 59.03
9.81 9.97 4.73 11.89 17.25 12.45 13.01 14.59 13.12 13.09 10.77 10.77 49.53 17.06 16.01 53.27 7.42 2.97 22.27 0.0 0.0 0.0 11.15 12.18 5.92 19.77 15.25 8.21 16.39 13.65 15.85 8.45
2.25 1.91 2.69 2.36 1.87 2.32 4.17 4.01 4.93 2.69 3.18 3.01 4.46 2.32 1.0 12.8 0.48 1.23 0.35 0.0 0.19 0.0 3.0 2.91 2.27 0.16 0.98 0.91 0.72 1.47 0.34 0.54
0.04 0.0 0.0 0.0 0.63 0.0 0.0 0.09 0.0 0.45 0.0 0.0 0.22 0.95 0.66 1.9 0.0 0.0 0.09 0.0 0.37 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.09 0.09 0.0 0.0
0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.18 0.08 0.0 0.26 0.09 0.04 0.37 0.1 0.0 0.26 0.0 0.0 0.0 0.11 0.1 0.0 0.0 0.13 0.0 0.09 0.0 0.05 0.0
3.2 3.04 3.8 3.42 3.43 3.1 3.67 4.23 4.65 3.91 3.68 3.69 13.55 8.53 7.04 74.99 2.88 1.79 3.17 3.72 4.25 0.27 3.78 5.75 1.13 6.78 6.46 5.67 5.68 6.07 4.34 4.39
14.14 13.97 27.16 11.19 12.7 18.42 35.34 28.72 39.07 30.46 31.05 16.78 32.2 102.11 39.67 109.3 21.08 176.74 54.13 48.39 28.41 31.59 51.37 104.91 27.32 32.4 147.3 78.79 54.05 54.88 68.41 105.12
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.06 0.12 0.18 0.72 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.11 0.11 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.01 0.0
11.03 10.97 6.69 7.77 8.43 11.25 10.22 8.32 9.26 10.73 9.4 13.12 8.8 23.72 13.75 36.23 6.62 26.29 48.13 14.09 37.4 10.9 5.78 14.52 19.39 17.95 11.84 8.14 16.46 19.2 15.11 19.39
6.03 4.43 3.32 4.71 4.24 4.09 4.32 3.33 3.39 4.72 4.41 3.87 13.96 13.34 12.67 24.71 2.74 2.32 12.64 0.07 0.0 0.0 2.04 2.21 0.26 9.25 6.03 6.54 3.22 3.56 2.05 2.45
33.66 17.81 32.82 26.61 59.57 49.5 40.29 55.41 17.96 17.45 23.19 20.3 1180.68 1498.32 220.23 6865.78 15.87 570.11 140.6 42.68 16.81 0.0 18.18 287.75 7.51 295.13 3222.09 705.66 241.65 271.16 234.94 297.2
4.43 4.24 4.13 5.5 4.06 4.43 4.17 5.08 4.31 4.14 4.13 4.68 28.36 9.65 7.27 30.95 2.42 1.99 10.22 0.0 0.44 0.0 9.68 11.53 2.02 11.71 8.0 9.29 3.09 3.61 3.75 2.38
1.47 2.5 2.07 1.89 2.24 1.68 1.94 1.69 2.27 1.78 1.78 1.63 16.07 2.24 2.24 94.49 5.05 7.1 31.92 5.49 5.91 0.37 10.0 20.6 4.93 9.04 10.47 4.91 12.54 14.59 16.45 15.4
21.39 20.17 22.8 26.89 28.79 23.28 27.95 30.85 30.79 39.15 30.86 27.86 64.74 37.15 24.79 90.83 23.31 30.81 27.91 19.82 12.34 33.22 17.97 29.76 3.23 22.34 14.87 8.76 20.77 21.6 22.09 24.37
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.15 0.0 0.0 3.25 0.77 0.0 2.78 0.0 0.0 0.0 0.67 1.41 0.0 0.0 0.0 0.0 0.79 0.75 0.79 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.03 0.43 0.04 0.92 0.0 0.08 0.05 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.05 0.03 0.0 0.0
26.4 30.52 36.08 28.43 27.74 28.01 26.49 25.27 30.85 31.95 32.58 23.85 149.16 51.78 19.45 188.66 32.79 21.95 69.43 28.57 12.84 36.51 58.42 56.88 38.92 101.98 68.6 55.47 43.57 55.87 47.37 55.65
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15 0.46 0.36 0.0 0.32 1.39 0.49 4.78 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.95 0.0 0.0 0.0 0.0
0.96 1.27 1.0 1.76 0.27 1.57 1.47 0.71 0.94 1.62 1.28 1.22 5.26 2.84 2.71 14.55 1.0 6.06 10.98 0.51 0.63 0.0 1.33 2.61 1.19 3.67 8.23 1.65 2.36 2.06 1.23 2.07
1.41 1.36 1.68 1.83 0.72 1.83 1.53 1.85 1.38 1.67 1.16 0.91 9.56 7.46 1.88 37.85 0.58 2.54 3.74 0.21 0.37 0.0 3.84 7.52 1.19 0.66 2.77 2.65 2.14 2.83 1.42 2.14
0.0 0.0 0.05 0.01 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.1 0.0 0.01 2.46 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.31 0.15 0.03 0.51
8.63 9.18 8.56 6.46 7.29 7.51 6.85 7.23 7.12 5.97 6.92 7.21 27.13 35.7 17.22 107.66 14.73 28.24 67.4 6.86 2.2 4.19 23.32 47.78 25.07 31.53 19.66 11.74 22.41 24.32 19.01 21.8
0.4 0.34 0.23 0.18 0.29 0.29 0.33 0.59 0.16 0.34 0.64 0.18 0.41 0.7 0.59 3.9 0.56 0.41 2.27 0.0 0.0 0.25 2.05 2.74 0.35 0.3 0.14 0.53 2.9 1.49 0.5 0.53
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.15 0.0 0.0 3.47 1.55 0.0 0.99 0.0 0.0 0.0 1.03 1.4 0.0 0.0 0.0 0.0 1.13 3.83 3.39 0.54
11.35 10.21 9.6 7.8 12.06 8.09 10.13 7.73 6.96 10.3 9.93 11.14 17.49 19.8 19.7 39.92 4.84 5.01 15.81 0.14 4.98 4.2 3.25 3.57 6.89 12.15 7.81 8.21 9.0 9.12 6.2 6.06

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)