Heatmap: Cluster_309 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.1 -1.13 -0.71 -0.51 -1.63 -1.01 -0.83 -0.16 -0.21 -0.99 -0.12 -0.55 0.14 -0.53 0.95 0.54 0.13 -1.11 1.05 2.29 - -0.54 -0.02 -0.08 - 0.06 -0.69 -0.96 0.37 0.79 0.39 0.27
-0.83 -0.83 -0.84 -0.55 -0.75 -0.73 -0.23 -0.27 0.1 0.31 -0.18 0.23 0.21 1.05 1.01 0.04 -1.53 -0.36 1.84 2.35 -1.06 -0.42 -1.53 -0.89 -4.17 -0.48 -0.92 -1.78 -2.04 -1.68 -0.02 0.08
-1.6 -2.32 -2.53 -1.31 -3.14 -1.5 -1.72 -1.35 -0.39 -0.99 -0.69 -1.54 0.42 -1.33 1.35 1.04 -0.29 0.69 1.77 2.85 -0.07 -0.16 -0.34 -0.64 -1.67 -2.72 -1.31 - -0.05 -0.52 0.41 -0.1
-0.4 -0.62 -0.02 -0.4 -0.32 -0.54 0.23 0.38 0.54 0.87 0.58 0.16 0.85 0.72 -0.69 1.12 -1.49 -1.19 -0.31 2.24 -2.7 -4.74 -1.67 -1.84 -3.2 -0.44 -0.9 -1.24 -0.58 -0.79 0.6 0.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.