Heatmap: Cluster_245 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
- - - - - 0.67 - 2.29 - - - - - - 3.0 - - - -0.07 - - - 1.2 - 2.43 1.47 2.2 - - -0.38 - -0.47
-1.78 -1.48 - - 0.57 1.56 0.92 1.12 - -0.67 1.22 -1.35 -23.18 -0.36 1.18 - - -0.6 0.78 - - 0.29 - -0.51 2.92 - 1.06 1.06 - - - -1.34
-1.78 -1.48 - - 0.57 1.56 0.92 1.12 - -0.67 1.22 -1.35 -23.18 -0.36 1.18 - - -0.6 0.78 - - 0.29 - -0.51 2.92 - 1.06 1.06 - - - -1.34
-2.21 - -1.65 - - 1.11 0.9 0.98 0.03 -0.53 -1.44 -0.35 - - 2.17 - -0.42 -0.77 0.5 - - - 0.18 - 2.54 - - 2.54 -1.47 0.15 0.13 -
1.18 1.79 - 1.09 - 1.2 - 1.83 - 0.72 - 1.21 - - 2.55 - - - - - - - - - 3.08 - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.