Heatmap: Cluster_51 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-2.83 - -1.69 0.23 -2.83 0.59 0.5 1.18 0.07 -1.13 0.83 0.21 - -3.11 -2.18 - - -1.86 - - -0.59 3.47 - -0.91 -0.07 0.29 1.17 1.15 -1.4 -0.52 - -
- - - - - - - - - - - - - - - - - - - - - 5.0 - - - - - - - - - -
-4.15 - - - - - - - - - - - 1.19 -0.31 0.03 0.03 -1.82 -0.24 -1.02 -0.27 1.33 4.39 - - - - - - -1.33 -3.57 -1.94 -3.65
-0.34 -0.57 -0.87 -0.61 0.01 -0.17 -0.17 0.66 0.06 -0.12 -0.25 0.03 -0.18 -0.95 0.36 -0.07 -0.78 -2.1 -0.31 -2.07 -1.79 2.61 -0.65 -0.07 0.37 -0.14 0.34 0.55 -0.61 -0.49 -0.66 -0.46
-0.21 -0.51 -0.24 0.02 0.81 0.5 0.71 0.07 0.43 -0.35 -1.0 -0.67 -1.15 -1.59 2.0 -0.5 -0.45 -0.29 -0.4 -3.52 -1.87 2.14 -0.53 -0.64 -0.32 -1.43 0.23 0.01 -0.89 -0.44 -1.23 -0.96
- - - - - - - - - - - - 0.77 - - 1.19 0.14 0.03 0.2 1.43 - 3.7 0.91 0.67 -0.33 - - - 0.27 0.75 -0.14 0.01
-1.45 -1.55 -1.38 -1.48 0.49 0.46 0.23 0.62 0.16 -0.01 -0.92 -1.03 -2.92 -3.0 -0.1 -2.47 -1.12 -0.91 -1.74 -5.47 -0.76 3.5 -1.65 -2.33 -1.73 -1.63 0.74 1.15 -0.46 -0.24 -1.15 -1.65
-0.66 -0.77 -0.8 -0.4 0.11 -0.32 -0.03 -0.52 -0.19 0.03 -0.56 -0.65 -2.76 -1.64 0.81 -1.81 -0.85 -0.14 -0.52 0.23 -2.86 3.29 -1.45 -2.22 -0.82 -0.47 0.98 0.76 -1.43 -0.99 -2.08 -1.81
-0.1 -0.12 -0.06 0.19 -0.14 0.24 -0.12 0.03 0.05 -0.17 -0.27 -0.33 0.08 0.61 0.78 -0.1 -0.26 0.06 -0.02 -0.21 0.14 0.91 -0.13 -0.28 0.07 -0.66 0.22 -0.11 -0.44 -0.5 -0.38 -0.32
-0.66 -0.35 -0.26 0.06 0.27 0.04 0.06 -0.22 0.32 -0.62 -0.62 -0.94 0.99 0.59 1.01 1.17 -0.34 -0.85 0.7 -2.69 -2.92 0.14 0.12 0.47 -1.98 0.03 0.47 0.75 -0.19 0.14 -1.79 -1.67
0.21 0.14 0.45 0.11 -0.08 0.08 0.26 -0.0 -0.26 0.48 0.26 -0.13 -1.4 -0.09 0.64 -0.52 0.11 -0.45 0.51 -0.46 -2.81 2.15 -1.61 -2.25 -2.63 -0.23 -0.01 -0.03 -0.61 -0.94 -0.14 0.05
0.13 0.14 0.08 0.06 0.16 0.26 0.04 0.45 0.12 0.11 0.06 -0.05 -0.16 -0.07 0.97 0.14 -0.5 -0.31 0.15 -0.61 -1.27 1.01 -0.33 -0.12 -0.81 -0.08 -0.26 -0.3 -0.36 -0.29 -0.27 -0.14
-2.66 -2.7 -4.47 -2.85 -0.48 -1.05 -0.92 -0.43 -0.94 -1.02 -1.69 -1.15 -1.61 -3.24 -4.81 -3.78 -2.85 -1.2 -2.08 -3.89 - 3.9 -1.99 -3.08 2.56 0.5 0.71 -1.76 -0.81 -1.26 -2.52 -3.18
-0.7 -0.81 -0.21 -0.3 -0.2 -0.71 -1.87 -4.12 -1.12 -0.91 -0.89 -1.21 -1.15 -2.11 2.94 -0.25 -0.15 -0.43 -2.77 - 2.33 3.02 -4.51 -5.71 - - -3.18 -1.31 -1.45 -2.29 -4.34 -4.12
0.05 -0.18 -0.33 -0.12 0.02 0.31 0.48 0.13 0.4 0.27 0.01 -0.0 -0.19 -0.57 1.46 -0.15 -0.02 -0.33 0.15 -0.35 -0.86 1.36 -0.46 -0.96 -0.72 -0.46 -0.34 0.12 -0.33 -0.43 -0.96 -0.75
-1.32 -0.11 -2.8 -0.39 -0.08 -0.45 -1.6 -2.71 - 0.96 -2.58 -0.98 - - -3.23 - - - -0.16 -1.33 0.37 4.12 - - 2.14 -1.47 - - - -2.48 - -
-2.47 - - - - -1.19 - -4.07 -3.74 - - - - - - - -2.08 -1.71 -1.17 - - 4.89 - -3.82 -0.85 - - - - - - -
- - - -1.86 -1.59 - -0.51 - - - - - 0.6 -1.36 -2.02 -0.31 - 2.57 -0.55 - 0.03 4.33 - - - - - - - - - -
-2.34 -2.34 -1.87 -1.78 -3.71 0.28 0.34 0.37 0.08 -0.67 -1.16 -0.89 -4.6 -4.27 -0.2 -3.19 -0.83 -1.17 -1.64 - -0.76 3.31 -1.08 -1.49 -0.24 -0.38 1.88 1.71 -0.44 -0.14 -1.76 -2.02
-2.83 -1.55 -0.78 -0.53 -1.61 -1.99 -0.04 -1.93 -1.32 0.16 -1.62 -1.89 0.22 0.12 2.38 -0.07 -0.55 -0.18 1.11 -4.18 -1.04 3.33 -1.93 -4.39 -2.32 -2.26 -1.11 -0.14 -2.03 -0.23 -2.36 -2.1
- - - -0.39 - - - -0.73 - - -0.63 -0.45 - - - - - 1.11 1.46 - - 4.44 - - - - - - - 0.43 -0.58 -0.64
- - - - - - - - - - - - - - - - - - - - - 5.0 - - - - - - - - - -
-0.62 -1.2 -0.28 -0.37 -0.34 -0.57 -0.71 -0.84 -0.65 -1.96 -1.18 -0.83 -1.31 -1.85 2.15 -0.44 -0.25 -1.02 -0.06 1.07 -2.87 2.78 -1.66 -1.07 -0.3 -0.1 0.38 0.25 -0.64 -0.17 -0.98 -1.15
0.17 - 1.22 - - - - - - - - - - - - - - - -4.72 - - 4.83 - - - - - - - - - -
- 0.37 - - - 0.59 - -0.88 - - 0.99 - - 0.3 -0.47 -0.15 - 0.56 -0.46 - - 4.29 - - - - - - -0.58 - -0.49 -0.56
-2.73 -1.39 -0.02 - -0.57 - 0.43 - - -1.46 - -2.43 - -0.8 -2.9 - - 2.54 1.7 - - 4.15 -2.25 - - - - - - -2.19 - -
-0.38 0.22 0.02 0.32 0.44 0.49 0.69 0.38 0.33 -0.01 0.01 -0.53 -0.47 -0.21 1.53 -0.23 -0.53 -0.75 -0.12 -1.67 -1.1 0.88 -0.18 -0.17 -0.6 -0.48 0.4 0.25 -0.6 -0.33 -1.14 -1.14
0.17 - 1.22 - - - - - - - - - - - - - - - -4.72 - - 4.83 - - - - - - - - - -
-0.94 -0.36 0.55 -0.72 -1.12 -0.09 -0.76 -1.8 -0.14 -0.98 -1.73 -0.27 -0.69 2.01 2.22 0.31 -1.76 0.74 -1.5 -1.2 1.19 2.31 -2.23 -3.74 -0.81 -1.01 0.3 -1.64 -3.97 -2.82 -2.86 -
-0.44 0.16 -0.04 -1.21 -1.75 0.18 -0.29 -1.62 -0.66 0.22 -0.32 -0.37 -0.34 -1.79 -0.74 -1.62 -1.27 -1.83 1.35 -5.15 - 3.29 -2.11 -1.47 0.34 -1.3 0.66 0.47 -1.29 -1.29 -0.25 -0.31
-3.72 - - - - -2.53 - - - - - -2.81 - - -0.89 -2.32 - - 1.07 - - 4.85 - - - - - - - - - -
- - - - 0.7 -1.3 -0.89 - - - - - -0.48 - -2.94 -1.08 0.29 - -0.95 -0.88 - 3.85 0.31 0.65 - - 0.51 2.13 -0.49 -0.09 -1.2 -0.43
- - - - - - - - - - - - - - - - - - -0.24 - - 4.88 - - - - - - - 0.78 - -
-1.13 -0.83 -0.84 -1.06 -1.43 -0.61 -0.21 -0.07 0.32 -0.06 -0.93 -0.92 -0.74 -1.0 0.2 -1.94 -1.95 -0.44 0.87 -3.9 1.27 2.97 -1.41 -1.99 0.22 0.87 0.57 0.61 -1.15 -0.68 -1.76 -2.22
-1.27 -1.15 -1.45 -0.85 -0.01 -0.02 -0.15 0.2 0.05 -0.29 -0.49 -0.57 0.18 0.61 2.05 0.92 -1.12 -1.62 0.7 0.18 1.01 1.87 -1.27 -1.78 -1.15 -0.66 -0.75 -0.38 -0.38 -0.67 -1.91 -2.0
0.57 - - - - - 0.98 0.75 0.5 - 0.93 - - - - - 0.51 - -0.46 -0.71 - 3.73 -1.18 - - - 1.83 1.33 -1.05 -1.08 - -
-0.87 -0.95 -0.66 0.01 -0.3 -0.53 -0.73 -0.07 -0.75 -0.82 -0.51 -1.1 -0.17 0.39 1.86 -0.24 -1.14 -1.07 -0.12 0.07 1.08 2.65 -0.65 -0.1 0.59 -1.15 -1.36 -1.53 -0.87 -0.89 -1.54 -2.11
-0.71 -0.14 0.93 0.25 -0.37 -0.52 -0.56 -1.08 -0.08 -0.18 -0.97 -0.19 -0.12 -0.86 1.17 0.02 -0.21 -0.39 0.17 -1.03 -0.62 2.5 -0.21 -0.35 -0.23 -0.26 -0.55 -0.59 -0.74 -0.55 -1.15 -0.25
-2.42 -2.58 - -3.94 -3.38 - -1.57 -3.73 -1.18 -2.1 -0.32 -0.09 0.51 - 0.43 0.37 -2.71 -2.85 2.85 - - 3.75 -2.65 -2.15 -0.61 0.63 - -0.2 -3.66 - -3.66 -
-1.32 -4.84 -2.57 -1.68 -0.91 -0.04 0.74 0.79 0.51 -0.32 -0.4 -1.7 -2.12 -2.88 0.38 -1.13 -1.05 -0.42 -0.83 0.14 -3.29 3.05 -2.36 -2.99 0.21 -1.59 1.45 1.3 -0.67 -0.19 -0.77 -1.29
-1.78 -1.15 -1.74 -2.09 -2.24 -0.99 -1.12 -2.47 -1.09 -0.8 -1.0 -0.94 0.74 -1.61 -1.4 0.19 0.05 -0.12 -0.04 -1.71 1.26 2.83 0.07 0.27 1.02 -0.73 0.03 -0.3 -0.39 -0.36 0.48 0.47
-0.27 -0.29 0.16 0.16 0.38 0.67 0.41 0.37 0.37 0.18 0.01 -0.27 -0.04 -0.18 1.11 -0.32 -0.35 -0.54 -0.25 -0.45 -2.31 0.94 -0.22 -0.12 0.45 -0.45 0.08 -0.09 -0.53 -0.38 -1.03 -0.88
-1.6 -2.02 -2.34 -1.16 -4.36 -1.79 -2.41 -1.91 -2.16 -1.8 -1.49 -1.73 0.97 -0.06 2.56 1.5 -2.62 - -3.07 -1.49 0.75 3.66 -3.69 -2.21 -1.39 -1.88 -2.08 -1.21 -2.82 -1.72 -3.72 -4.12
-2.16 -1.88 -2.07 -1.17 -1.41 -0.75 -4.81 -2.46 -1.16 -3.82 -3.99 -1.63 -0.68 -1.69 -1.4 -0.89 -1.22 -4.88 -0.44 1.0 -3.95 3.94 -0.73 -0.47 1.19 -0.22 -0.26 0.25 -1.63 -1.68 -1.02 -0.69
-3.07 -1.51 - -2.06 -4.21 -2.84 -4.04 -2.25 -3.29 -3.23 -1.79 -3.0 -1.3 -1.99 -1.03 -1.82 -3.88 -2.58 -0.43 1.0 1.21 4.4 -2.48 -0.57 -0.84 -1.84 - - - -2.4 -1.67 -2.06
-1.83 - - - - - - -1.05 0.22 0.85 - - - - -0.12 - - - - - 0.82 4.59 - - - 0.62 - - - - - -
0.3 0.17 -0.03 -0.15 -1.58 -0.73 -0.47 -0.17 0.09 0.27 -0.57 0.13 -2.32 -2.63 -1.58 -3.67 -0.18 -0.49 -2.99 - - 3.37 0.91 0.92 -2.52 -0.5 -0.88 -1.1 -0.41 -0.87 -0.4 -0.64
-1.77 -1.74 -0.82 -1.83 -0.32 0.01 0.13 0.61 0.41 0.16 -0.61 -1.39 -4.19 -3.98 -1.78 -2.36 0.04 0.85 -1.6 0.22 -1.75 2.98 -0.4 -1.12 0.34 -0.99 0.74 0.41 0.26 0.12 -0.65 -0.67
-3.0 -1.39 -3.77 -1.97 -5.78 -3.18 -2.27 -1.56 -2.03 -1.57 -2.2 -2.25 -1.04 0.41 2.52 -0.43 -3.35 -3.87 1.65 - -2.5 4.02 -2.88 -3.75 -3.01 -3.82 -1.61 -1.6 -2.87 -3.77 -4.81 -3.06
-0.4 -0.26 -0.62 -0.35 -0.17 0.3 -0.32 -0.61 -0.44 -0.58 -0.45 -0.97 -1.15 0.28 1.42 -0.19 -0.4 -0.2 0.16 1.21 -1.13 2.35 -0.59 -0.53 1.01 -0.79 -1.01 -1.31 -1.23 -1.05 -0.93 -0.72
-0.76 -2.12 -0.62 -1.27 -0.25 -1.56 0.24 -0.43 -0.18 -2.66 -0.34 -0.47 0.62 -0.05 2.35 0.97 0.03 -0.2 1.22 -2.16 - 1.24 0.74 0.01 - -1.24 -1.62 -0.12 -0.05 0.42 -0.77 -0.2
- - - -3.03 -2.08 - -3.11 -1.75 -0.55 - - -2.12 - - -3.66 -2.89 -0.97 -2.36 -0.46 0.38 0.69 3.91 -1.04 -1.05 1.32 1.11 -1.75 -0.74 0.12 0.57 0.27 -1.1
-0.57 0.05 0.01 0.22 0.4 0.4 0.17 -0.51 -0.09 -0.22 -0.11 -0.47 0.07 0.59 0.92 0.11 -0.74 -1.98 0.18 -1.47 -2.09 1.3 -0.52 -0.46 0.53 -0.24 0.85 1.06 -1.0 -0.85 -1.4 -0.77
-2.75 - - - -2.42 - - -2.26 -1.17 -3.88 -1.46 -1.62 - -2.02 - -3.27 -3.42 - -3.42 -2.42 - 4.51 -2.48 -2.41 - 1.28 0.43 1.08 -1.89 -3.42 -3.47 -
-2.93 -1.34 -0.97 -0.57 -1.13 -1.07 -0.09 -0.68 -0.92 -2.21 -0.63 -1.78 -0.55 -2.44 -2.25 -1.1 0.16 -0.54 0.23 -1.09 -1.55 3.57 1.46 1.41 -1.42 -1.77 - - -0.05 -0.23 -0.55 -1.52
0.17 - 1.22 - - - - - - - - - - - - - - - -4.72 - - 4.83 - - - - - - - - - -
-0.81 - - 0.55 - - - - - - - - -0.79 - - - 0.05 - 0.66 - - 4.59 - - - 0.87 - -1.48 - - - -1.0
-1.38 - -1.56 0.32 - - 0.3 1.01 0.4 2.11 - - 0.1 - - - -2.41 - - - - 4.01 - - 0.47 -0.21 -0.01 - - -2.42 -1.44 -
- - -1.7 - - -1.38 - - - - - - -1.08 -1.5 -1.99 -0.01 - - -1.25 -1.08 - 4.72 - - - - - - - -0.24 -1.27 -0.35
- - - - -28.27 - -0.06 -0.08 -12.37 -21.68 - 0.23 -15.3 - - -8.73 -0.47 -3.07 -1.82 -1.64 - 4.34 -5.72 -10.22 2.25 -26.03 - -1.41 -8.61 -0.31 -0.83 -0.57
-2.8 -3.06 -2.23 -1.03 - -1.85 -0.92 -0.85 -0.97 -0.91 -0.99 -0.68 - -0.44 1.93 0.4 -0.62 - 1.0 - 0.06 2.44 - -1.06 1.13 0.75 1.14 2.17 -1.49 -0.71 -2.95 -1.5
-0.56 -0.68 0.39 -0.25 -0.28 0.35 0.42 -0.07 -2.54 0.06 0.31 0.12 -0.43 0.22 2.35 1.24 -1.55 -2.18 0.66 - 1.22 1.06 -1.59 -2.9 - -0.15 -0.02 -0.5 -1.12 -1.08 -1.44 -1.69
-1.03 -0.86 -0.4 -0.51 -1.14 0.24 0.02 -0.64 -0.25 0.29 -0.02 -0.32 -1.1 0.65 1.38 -0.96 -0.35 0.97 0.28 - -2.58 1.97 -1.43 -1.82 1.44 0.63 0.3 -0.01 -0.88 -0.79 -1.79 -0.73
-0.8 -1.33 0.65 0.26 -0.08 0.26 -0.69 0.46 -0.19 -2.12 -0.1 -0.3 -0.36 -1.35 1.58 -0.86 0.14 0.24 0.08 -0.69 -1.82 2.69 -1.25 -0.49 - -1.12 -0.07 -0.34 -0.5 -0.09 -1.13 -1.19
-0.67 -1.94 -3.35 - 0.69 -0.15 0.18 -0.55 -1.09 -0.71 -0.44 -1.33 - -1.98 -2.91 -2.2 -1.47 -2.49 -2.39 - 0.81 3.54 -0.85 -2.14 0.6 -0.16 0.63 1.17 -0.09 0.42 -2.67 -1.74
-0.3 -0.17 0.01 0.1 0.26 0.25 0.22 0.24 0.09 -0.11 -0.14 -0.4 0.04 -0.49 0.98 0.14 -0.33 -0.77 0.32 -0.28 -0.52 0.89 -0.1 0.06 -0.43 0.17 0.09 -0.03 -0.32 -0.3 -0.5 -0.31
-3.27 -3.88 -2.49 -2.06 - -3.61 - - -3.76 -3.93 - -1.82 -0.9 -1.19 -1.01 -2.04 -1.49 0.25 1.15 1.62 - 4.37 - -1.25 - - - -1.44 -3.77 -0.99 -3.82 -2.28
-0.42 -0.29 -0.57 -0.15 0.02 -0.13 -0.02 -0.07 0.02 0.05 0.15 -0.15 0.01 -0.2 0.97 0.56 0.31 -0.55 0.24 -0.69 -1.27 0.65 -0.08 -0.12 -0.73 0.2 0.16 0.06 0.22 0.28 -0.02 -0.36
-0.08 -0.49 -1.06 -0.15 0.22 -0.31 -0.34 -0.2 -0.59 -0.02 0.01 -0.15 -1.27 -0.21 2.22 -0.43 -0.73 -0.88 1.29 -1.01 -3.97 2.8 -2.1 -2.07 -2.95 -0.56 -1.18 -0.66 -1.41 -1.2 -1.25 -1.34
-0.27 -0.88 -1.16 -0.49 -0.36 0.08 -0.52 -0.82 -0.03 -1.3 -0.37 -0.78 -3.97 -5.37 -3.85 -4.81 -2.47 0.13 -1.12 -1.81 -1.24 3.7 -1.89 -2.53 -0.08 -0.5 1.27 1.08 -1.6 -0.53 -2.15 -3.22
-0.05 -0.11 0.22 0.03 0.33 0.8 0.57 0.3 0.06 -0.29 -0.34 -0.38 -0.1 -1.44 1.46 0.09 -0.51 0.29 0.15 -2.37 -3.6 1.12 -0.35 0.13 -1.62 -0.37 0.49 0.22 -0.36 -0.2 -1.06 -0.93
-0.65 -0.43 -0.02 0.17 0.45 0.2 0.45 0.44 0.53 0.31 0.11 -0.08 -0.88 -0.21 1.57 -0.64 -0.4 -0.73 -0.59 -0.86 -0.54 1.31 -0.43 -0.67 -0.2 -0.32 -0.07 0.32 -0.25 -0.04 -1.56 -1.31
-0.31 -0.41 -0.34 -0.01 -0.01 0.16 0.03 0.15 0.06 0.08 -0.23 -0.18 0.46 0.22 1.05 0.74 -0.1 -0.42 0.45 -1.89 -1.39 0.31 0.08 0.49 -0.74 -0.09 -0.06 -0.25 -0.07 -0.05 -0.41 -0.16
-3.1 -4.2 -2.36 -4.5 - -1.37 - -4.28 -3.07 -4.24 - - -3.81 - -2.97 - -3.84 -3.31 2.27 -3.79 - 4.66 - -3.9 - - -2.57 - -3.96 -2.96 - -
-0.42 -0.65 -0.49 -0.45 -0.26 -0.05 -0.13 -0.57 0.44 0.02 -0.41 -0.74 0.18 -0.41 2.49 0.01 0.13 -0.33 -0.24 - 0.1 1.86 -0.71 -0.55 -3.31 0.22 -0.56 -1.13 -0.46 -0.56 -1.19 -0.81
-1.56 -1.47 0.86 - -32.3 -2.61 -11.32 -4.09 -26.35 0.01 - -2.58 -1.33 -1.92 3.06 -0.61 0.16 -0.35 -0.42 -1.62 - 3.35 - -2.54 -2.82 -3.1 -0.04 -1.29 -0.07 0.46 -1.42 -0.48

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.