Heatmap: Cluster_124 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-1.24 -1.97 -2.65 -1.03 0.42 0.95 1.0 0.93 0.97 0.2 -0.48 -0.56 -1.96 -2.07 -0.37 -1.8 -0.64 0.48 -0.63 1.87 0.14 0.01 -0.76 -1.03 1.45 -3.17 0.1 -0.72 -0.12 0.35 -0.34 -1.35
-1.32 -2.44 -1.85 -2.11 -1.46 -0.53 -0.9 -0.44 -0.74 -0.33 -1.0 -1.35 -2.14 -4.13 -1.08 -2.06 -1.04 -0.85 -1.18 3.16 0.85 2.61 -1.27 -1.44 0.47 -0.25 -0.02 0.1 -0.52 -0.56 -2.03 -1.82
-0.68 -0.31 -0.58 -0.42 -0.66 -0.38 -0.43 -0.42 -0.29 -0.12 -0.47 -0.44 -0.07 0.05 0.43 0.47 -0.11 0.31 0.21 0.82 0.23 1.67 -0.67 -0.63 0.28 0.45 -0.09 0.11 -0.08 -0.11 -0.69 -0.89
-0.46 -0.69 -0.94 -0.84 -0.08 0.31 0.67 -0.09 0.3 0.3 0.04 -0.5 -2.29 -2.81 -0.98 -1.65 -1.56 -0.64 0.16 1.73 -2.14 2.01 -2.07 -0.46 -1.39 1.34 0.95 0.19 -0.33 -0.43 -0.22 -1.05
-1.44 - - 0.73 - - -1.18 1.07 - - -1.51 -3.76 - - - -2.04 - 2.52 -2.16 3.89 - 1.71 -2.05 - - -0.6 -0.21 - -2.46 -0.36 - -
-1.12 -0.97 -0.94 -1.16 -1.11 -0.7 -0.91 -1.31 -0.69 -1.01 -1.1 -1.52 0.14 -0.44 -0.16 0.33 0.0 0.55 -0.06 1.4 1.03 1.91 0.61 0.58 -0.66 -0.22 -0.31 0.11 -0.08 0.07 -0.32 0.1
-0.35 -0.24 -0.07 -0.36 -0.02 -0.45 -0.47 -0.74 0.09 -0.18 -0.43 -0.05 -3.47 -5.5 -2.14 -2.65 0.81 -0.26 -2.75 2.1 0.19 2.89 -2.24 -2.93 -0.99 -1.51 -2.06 -1.87 0.11 0.13 0.34 -0.49
-1.31 -1.95 -2.3 -1.04 -2.13 -1.34 -0.39 -0.73 -0.84 -0.82 -0.23 -0.62 -2.4 -2.99 -2.84 -3.47 -1.24 -0.97 2.09 2.8 1.31 1.43 -0.6 0.46 0.86 0.01 0.07 0.25 -1.62 -1.41 -2.26 -2.69
-0.18 0.02 -0.15 -0.06 -0.12 0.01 -0.07 -0.17 -0.46 -0.18 -0.33 -0.39 0.33 -0.58 -0.11 0.35 0.04 -0.29 0.51 1.37 -1.82 -0.04 0.1 0.11 0.12 -0.37 -0.31 -0.07 0.13 0.07 0.1 0.13
-0.63 -0.49 0.28 0.15 0.13 0.46 0.3 0.37 0.43 0.23 0.22 -0.13 -2.65 -2.06 0.83 -1.73 0.4 0.05 -0.93 1.38 -0.15 1.02 -0.69 -1.17 0.41 -0.99 -0.83 -1.07 -0.4 -0.23 0.17 0.22
-1.36 -1.95 -1.16 -1.18 0.17 0.18 0.74 0.61 0.71 0.0 -0.85 -1.07 -2.0 -2.62 -0.41 -1.75 -0.19 -1.02 -0.46 1.75 -0.88 1.34 -0.26 -1.0 0.47 -0.18 0.91 1.28 0.05 -0.08 -0.37 -0.57
-1.29 -1.15 -0.5 -0.54 0.07 0.12 0.32 0.27 -0.04 -0.6 -0.44 -0.95 -0.44 -1.2 1.84 -0.11 -0.73 -0.62 -0.25 1.45 -1.68 1.33 -0.72 -0.23 0.66 -0.25 0.61 0.28 -0.58 -0.37 -1.19 -1.12
-1.43 -3.77 -1.66 - - -3.81 -3.95 -1.4 - - -3.71 -2.32 -2.08 -1.57 -2.18 0.32 -0.62 2.29 0.43 3.07 0.77 1.25 -0.77 0.12 1.45 - - -1.61 0.01 -1.81 0.73 0.4
-0.42 -0.41 -0.19 -0.24 -0.06 -0.08 -0.08 -0.16 -0.15 -0.29 -0.45 -0.6 0.12 -0.25 0.64 0.35 -0.27 -0.27 0.4 0.94 -0.15 1.16 0.07 0.21 -0.4 -0.32 -0.03 0.12 -0.06 0.03 -0.71 -0.52
-2.5 -2.46 -1.31 -1.46 -2.43 -1.22 -2.29 -2.4 -1.59 -3.0 -1.46 -2.41 - -2.27 - -3.74 -1.09 -1.8 -0.24 3.75 -4.52 3.56 -5.79 - -2.21 -1.99 -1.51 -3.62 -2.23 -1.91 -2.75 -2.99
-1.87 -0.48 -0.68 -0.64 -0.54 -0.12 -0.1 -2.18 -1.31 -1.58 -0.7 -2.11 -2.39 -0.67 1.73 -1.48 -3.24 -2.21 -1.4 2.78 0.55 3.0 -2.45 -4.42 -0.5 -1.46 0.16 0.19 -3.31 -4.86 -2.89 -4.97
-3.25 - - -1.83 - - - - - -0.92 - - - - -1.81 -1.91 -2.08 - -2.22 3.59 0.23 3.45 - -0.67 1.38 - 0.21 0.13 - -1.19 - -
-1.52 -1.14 -0.94 -0.94 -0.44 0.08 0.44 0.92 0.9 0.96 0.83 -0.13 -0.56 -2.73 -0.27 -0.09 -1.39 -1.47 0.71 2.02 - 1.01 -1.27 -1.61 -2.18 -0.7 0.53 0.83 -0.09 -0.45 -1.28 -0.57
- - - - 0.71 - - - 1.88 - - 1.07 - - 1.43 - -0.11 0.4 0.81 3.07 - 3.25 - - - - -22.81 - - - - -
-1.01 -0.67 -1.69 -0.88 -1.43 -1.38 -0.04 -0.42 0.55 -0.88 -0.23 -1.43 0.51 -1.48 -0.72 0.45 -0.43 -2.35 0.03 2.15 -1.08 0.97 -0.24 -0.07 1.44 -0.05 0.51 -0.05 -0.16 0.1 0.0 -0.19
-1.39 -2.44 -1.29 -1.51 0.7 0.38 0.25 0.42 0.53 0.2 0.29 -1.04 -4.59 - -0.39 -3.62 -1.48 -2.31 -1.62 2.32 -1.71 2.43 -2.49 -3.17 -0.28 0.12 0.92 0.82 -0.66 -0.7 -0.49 -0.71
0.1 -0.45 -0.08 -0.57 -0.4 -0.11 -0.13 -0.86 0.39 0.13 -0.23 -0.34 -4.95 -5.59 -3.3 -2.67 -1.25 -3.45 1.41 2.15 - 3.23 -1.03 -0.55 -1.51 -0.32 -2.11 -2.55 -1.36 -2.51 -1.13 -1.55
-0.1 -0.7 -0.56 -0.9 -0.64 0.41 -0.97 -0.11 -0.11 -1.85 -1.75 -1.74 -3.13 -2.41 -1.44 -2.94 -3.2 -2.57 -1.67 2.6 -0.91 2.52 -3.11 -3.32 0.28 0.99 1.17 1.99 -3.22 -2.22 -2.24 -3.33
-0.48 -0.1 -0.81 -0.59 -0.21 0.43 0.66 0.48 0.08 0.55 0.03 0.08 -1.82 0.37 0.72 -0.83 -0.77 -4.44 -1.29 2.16 -1.64 1.8 -0.96 -0.47 0.09 -0.17 -1.34 -0.45 -1.33 -0.59 -0.98 -1.59
-0.9 -1.2 -1.54 - -1.74 -1.1 - 0.03 1.69 -1.85 -1.37 -1.31 0.6 - - -1.57 -0.81 -0.29 1.3 2.96 - 2.45 -0.12 -0.78 0.91 0.29 - - - - -1.91 -0.38
-0.18 -0.44 -0.35 -0.17 -0.57 -0.16 0.46 0.43 0.77 0.97 0.49 0.1 -0.66 -0.17 0.12 -0.6 -0.72 -1.43 -0.3 1.66 0.41 0.13 -0.76 -1.27 0.14 -1.16 -1.12 -0.81 0.06 0.22 -0.04 -0.18
-0.8 -2.7 -2.15 -1.28 0.17 0.32 0.71 0.68 1.1 0.28 0.54 0.0 -2.23 -3.22 -0.46 -1.35 -0.76 0.11 -0.5 1.7 -2.79 0.97 -1.07 -1.23 0.35 0.04 0.86 1.01 -0.11 0.04 -0.56 -1.38
- - - - - - - - - - - -0.07 - - - - - - - 4.43 - 3.24 - - - - - - - - - -
-0.84 -1.13 -0.4 -0.46 -0.45 -0.19 0.42 0.13 0.06 -0.18 -0.82 -0.55 -0.33 -0.63 2.02 -0.34 -0.95 -0.51 -0.41 0.9 -1.97 1.83 -0.79 -0.37 -0.04 -0.03 0.76 0.3 -1.18 -1.02 -1.15 -0.46
- - - - - - - - - - - - 1.72 - - 1.19 0.63 - 0.4 3.0 - 2.33 1.67 1.01 1.01 - - - 0.8 -0.06 -1.63 -1.7
-0.63 -0.48 -0.29 -0.06 0.07 0.13 0.18 0.03 0.01 -0.07 -0.0 -0.34 -0.08 0.1 0.48 -0.09 -0.26 -1.03 0.06 1.19 0.27 0.54 -0.25 -0.03 0.21 -0.35 0.24 0.28 -0.33 -0.27 -0.58 -0.48
-2.81 -0.38 -0.73 0.79 1.26 -1.71 -2.13 0.2 -0.44 -2.45 - -0.55 -1.41 0.94 - -0.13 -0.51 -2.13 0.7 1.43 - 3.16 - -3.2 - 1.52 -1.75 -0.7 -3.13 -0.54 -2.16 -0.42
-0.79 -0.72 -0.53 -0.56 -0.14 -0.1 0.19 0.29 0.15 0.33 0.01 -0.14 -0.55 -0.2 0.2 -0.69 -0.86 -2.94 -0.62 1.2 0.36 1.98 -1.1 -1.15 0.57 0.77 0.14 0.12 -0.67 -0.72 -0.85 -0.61
-0.13 -0.03 0.03 0.23 0.04 -0.09 0.09 0.09 0.18 0.45 0.52 0.03 0.13 -0.28 -0.59 0.21 -0.41 -1.07 -0.34 1.21 -0.26 1.28 -0.79 -0.64 -1.71 0.74 -0.24 -0.39 -0.61 -0.64 -0.37 -0.65
-1.28 -0.37 -0.44 -0.05 -0.52 0.1 0.01 0.06 -0.58 -0.47 -0.71 -0.71 -2.72 -1.22 1.47 -1.42 0.07 -0.87 -1.2 2.03 0.65 1.29 -1.66 -1.2 0.5 -0.58 -0.14 -1.07 0.11 -0.34 0.66 0.18
- - - - - - - - - - - - -2.16 - - -2.42 - -2.35 0.27 4.01 -0.06 3.12 - - 2.1 - - - -4.06 -4.1 -4.07 -
-0.68 -1.04 -1.67 -1.34 -0.16 0.8 1.06 1.34 1.0 0.74 -0.4 -0.34 -2.7 -1.19 0.26 -1.43 -0.86 -0.48 -0.67 1.32 0.25 -0.01 -0.75 -1.46 -4.0 -0.78 0.5 0.07 0.12 0.29 0.68 0.02
- - - - - - - - - - - - - - - - - - - 4.29 - 3.63 - - - - - - - - - -
-0.18 -1.14 -1.53 -1.18 -0.04 0.34 0.6 0.28 0.52 -0.46 -0.52 -0.43 -2.82 -3.04 0.43 -2.26 -0.96 -2.03 -0.54 1.98 -0.45 1.86 -1.15 -0.79 1.29 -0.81 0.64 0.08 -0.05 -0.01 -0.77 -0.88
-1.41 -1.74 -1.0 -0.86 -0.56 -0.29 -0.08 -0.4 -0.57 -1.07 -1.08 -1.63 -0.38 -1.86 1.78 -0.57 -0.91 -1.03 -0.15 1.75 -0.79 2.23 -0.86 -0.45 0.66 0.31 0.7 0.91 -0.77 -0.51 -2.01 -1.73
-0.55 -0.48 -0.77 -0.53 -0.56 -0.24 -0.03 -0.12 0.05 -0.2 -0.26 -0.36 -0.14 -0.09 0.77 0.23 -0.36 -0.11 -0.05 0.52 0.27 1.38 0.15 0.16 -1.04 0.49 0.37 0.31 -0.32 -0.12 -0.58 -0.52
-0.87 -1.47 -1.41 -1.19 -0.9 -0.6 -1.19 -0.7 0.08 -0.65 -0.56 -0.72 -0.35 -1.42 -0.76 0.09 -1.14 -0.88 0.74 2.6 -0.42 1.87 -0.33 -0.21 1.68 -0.11 -0.69 -0.82 -0.25 -0.51 -2.19 -1.41
-0.06 -0.03 -0.15 -0.32 -0.2 -0.19 0.01 -0.04 0.11 0.3 0.2 0.25 -0.53 -0.68 -0.39 -0.01 -0.67 -0.65 0.09 1.44 0.76 1.14 -0.55 -0.32 -0.24 0.2 -0.46 -0.65 -0.3 -0.16 -0.44 -0.51
-0.51 -0.43 -0.3 -0.27 -0.21 -0.19 0.03 0.4 0.65 0.82 0.59 0.69 -1.27 -0.89 0.3 -1.05 -0.98 -0.94 -0.31 1.17 0.59 1.79 -1.15 -0.83 -0.54 0.17 -1.16 -1.32 -0.65 -0.69 -0.34 -0.08
-1.83 -1.64 -1.39 -1.18 -0.91 -0.73 -0.41 -0.47 -0.73 -1.24 -1.56 -1.46 -0.79 -1.64 1.96 -0.78 -1.12 -1.13 -0.38 2.03 -0.11 2.47 -0.91 -0.34 1.61 -1.01 -0.31 -0.35 -0.97 -0.65 -1.15 -0.82
-1.17 -0.68 -0.55 -0.24 -0.05 0.04 0.17 0.18 0.04 -0.21 -0.44 -0.62 -0.99 -0.98 0.81 -0.57 -0.73 -0.94 0.05 1.97 -0.76 1.49 -0.53 -0.18 0.32 0.39 0.45 0.42 -0.76 -0.53 -1.21 -1.24
-0.49 -1.13 -0.47 -0.44 0.06 0.23 -0.19 -0.12 -0.1 -0.24 -0.62 -0.83 0.31 -0.38 -1.44 0.85 -0.36 -0.15 0.38 2.02 -1.27 1.17 0.2 -0.09 0.21 -1.36 -1.08 -0.91 0.23 0.29 -0.35 -0.53

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.