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Heatmap: Cluster_143 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.16 -0.47 0.38 0.43 0.61 0.56 0.7 -0.11 0.48 0.6 -0.08 0.22 0.12 0.24 1.0 0.5 -0.31 -0.05 -0.28 -2.72 -3.57 - -0.25 -0.03 -2.26 -0.7 0.46 -0.22 -0.31 -0.2 -0.12 -0.04
0.27 0.38 0.57 0.51 0.48 0.66 0.47 0.38 0.26 0.59 0.3 0.22 0.67 0.43 -1.03 0.81 -0.44 -0.81 0.21 -2.97 -1.21 -5.02 0.13 0.09 -1.31 -0.47 -0.61 -0.49 -0.2 -0.18 -0.66 -0.82
0.11 0.66 1.08 1.35 1.32 1.3 0.06 0.28 0.03 0.29 0.08 0.26 -0.35 0.84 0.93 -0.22 -1.34 -0.69 -0.91 -0.86 -2.47 -1.89 -0.96 -1.15 -2.24 0.56 -0.8 -0.41 -2.3 -1.51 -2.55 -1.43
0.33 0.27 0.18 0.19 0.25 0.28 0.29 0.16 0.21 0.2 0.04 0.02 0.51 0.66 0.95 0.65 -0.37 -0.33 0.12 -2.06 -2.74 -0.24 0.13 0.23 -2.97 -0.54 -0.6 -0.33 -0.26 -0.07 -0.43 -0.48
0.71 0.31 0.42 0.27 0.36 0.29 -0.02 0.19 0.19 0.34 0.26 0.06 1.14 0.38 0.85 0.61 -0.99 -1.42 -0.7 -2.54 -1.89 -0.42 -0.15 0.25 -0.36 -0.28 0.03 0.16 -0.91 -0.65 -1.52 -1.15
0.61 0.44 0.14 0.05 0.07 0.11 0.09 0.17 0.38 0.53 0.53 0.5 0.64 -0.39 -0.17 1.26 -0.29 0.06 -0.49 -2.42 -1.02 -2.68 -0.44 -0.26 -1.19 -0.14 -0.11 -0.03 -0.32 -0.19 -0.38 -0.35
0.27 0.48 0.31 0.4 0.54 0.27 -0.01 -0.2 0.06 -0.04 0.21 -0.09 0.77 0.43 0.72 0.41 -0.1 -0.9 -0.19 -1.73 -2.29 -0.35 0.5 0.41 -2.03 -0.21 -0.22 0.08 -0.41 -0.33 -0.77 -0.69
0.17 0.52 0.01 0.65 0.75 0.64 0.28 0.31 0.74 0.86 0.68 0.49 -0.7 0.79 1.58 0.43 -2.57 -2.06 -1.04 -1.28 -3.33 -0.82 -2.89 -1.31 0.6 0.03 -0.53 -0.3 -2.17 -0.99 -2.34 -0.96
0.72 0.56 0.55 0.56 0.57 0.35 0.4 0.52 0.31 0.46 0.44 0.52 0.72 0.76 0.34 0.02 -0.17 -0.86 0.05 -3.89 -3.67 -0.56 -0.11 -0.19 -2.45 -0.64 -0.79 -0.82 -0.29 -0.35 -1.52 -1.39
0.58 0.52 0.54 0.47 0.66 0.59 0.01 0.26 0.38 0.28 0.27 0.04 -0.44 1.29 1.72 -1.28 -1.75 -0.32 0.96 -0.71 -3.92 -0.11 -1.88 -1.82 - -1.57 0.5 -0.19 -2.06 -1.53 -1.66 -0.83
0.65 0.42 0.09 -0.02 0.3 0.2 -0.19 0.36 0.29 0.35 0.62 0.44 0.75 0.24 0.3 0.74 -0.89 -0.87 -0.12 -1.49 -1.31 -2.69 0.17 0.67 -0.07 -0.46 -0.83 -0.58 -0.78 -0.65 -0.37 -0.28
-0.36 0.04 -0.06 0.05 -0.16 0.0 -0.1 0.25 0.44 0.34 0.11 0.06 0.49 0.75 0.88 0.62 -0.2 -0.09 0.04 -2.33 -0.46 -0.82 0.07 0.17 -0.71 -0.24 -0.45 -0.48 -0.23 -0.19 -0.16 -0.11
0.29 0.05 0.08 0.1 0.23 0.23 0.15 0.24 0.31 0.26 0.29 0.24 0.9 0.2 -0.45 0.74 -0.47 -0.83 -0.22 -0.49 -0.02 -1.21 -0.1 0.22 0.14 -0.0 -0.21 -0.1 -0.44 -0.37 -1.01 -1.19
0.86 0.59 0.71 0.65 0.77 0.7 0.57 0.04 0.24 0.13 0.41 0.2 0.92 0.5 0.57 1.12 -0.89 -1.01 -0.44 -3.87 -3.71 -6.78 -0.38 -0.18 -1.1 -0.72 -0.56 -0.4 -0.9 -0.55 -1.63 -1.77
0.31 0.03 0.19 0.48 0.54 0.52 0.47 0.42 0.59 0.8 0.6 0.61 1.02 -1.84 -1.26 1.2 -0.77 -1.09 0.08 -1.93 -2.54 -3.01 -1.31 -1.04 0.07 -0.41 -0.05 0.18 -0.27 -0.26 -0.86 -0.7
-0.03 0.72 0.44 0.51 0.67 0.67 0.85 0.33 0.84 0.63 0.56 0.48 -0.07 -2.44 -1.16 0.51 -0.27 -1.47 0.72 -2.26 -1.01 -0.43 -0.81 -1.82 -0.76 0.56 0.09 -0.43 -0.42 -0.36 -1.57 -1.98
0.18 -0.12 0.3 0.14 0.11 -0.07 0.29 0.59 0.62 0.84 0.68 0.55 1.15 0.21 -0.17 0.56 -1.22 -0.99 -0.29 -1.63 -1.76 -2.27 -0.42 0.04 -1.95 1.04 -0.74 -0.63 -0.49 -0.36 -0.67 -0.53
0.76 0.11 0.01 0.26 0.01 -0.26 -0.23 0.16 0.26 0.58 0.78 0.98 1.6 1.11 -0.23 0.57 -0.75 -1.5 -1.52 -4.8 -2.99 -4.42 -1.25 -1.22 -0.83 0.27 0.37 0.4 -0.72 -0.73 -0.53 -0.57
0.61 0.55 0.64 0.86 1.04 1.08 0.56 0.33 0.51 0.41 0.51 0.07 0.38 0.3 0.3 0.37 -0.86 -0.94 -1.72 -0.86 -2.1 -0.93 -0.53 -0.59 -1.56 -0.28 -0.24 -0.05 -1.85 -1.03 -1.61 -1.59
1.01 0.48 0.0 -0.06 0.2 0.01 -0.3 -0.28 0.26 0.17 0.36 0.22 0.71 0.35 0.99 1.09 -1.07 -0.86 0.96 - - -4.69 0.77 1.44 -5.08 -1.12 -1.36 -1.2 -0.9 -0.57 -0.94 -0.86
0.42 0.33 0.23 0.22 0.29 0.3 0.14 0.18 0.22 0.32 0.25 0.21 0.25 0.06 0.03 0.36 -0.21 -0.29 0.17 -1.63 -0.65 -0.54 -0.0 0.1 -0.09 -0.55 -0.56 -0.43 -0.04 -0.01 -0.36 -0.37
1.67 0.66 -1.01 -0.39 0.69 -0.34 -1.36 -1.1 0.03 -0.55 -0.83 0.89 2.31 1.43 0.32 1.83 -2.06 -2.44 -1.32 - - - -2.03 -3.13 - 0.33 -0.5 0.88 -1.15 -2.52 -1.8 -2.18
0.63 0.78 0.07 0.01 0.05 0.31 0.13 0.05 0.38 0.57 0.46 0.8 1.16 0.73 0.41 0.96 -0.85 -1.08 -0.73 -2.17 -0.21 - -0.46 0.01 -1.81 -0.96 -1.23 -0.69 -0.16 -0.01 -0.96 -0.98
0.75 0.48 0.4 0.23 0.41 0.3 -0.13 -0.11 0.01 -0.11 0.15 0.1 0.4 0.66 0.89 0.81 -0.68 -0.64 0.48 -4.64 -3.34 -0.06 0.42 0.56 -4.99 -0.67 -0.61 -0.7 -0.56 -0.34 -0.66 -0.32
0.91 0.53 0.29 0.65 0.7 -0.02 0.54 0.53 1.3 0.46 1.08 0.45 -3.24 1.22 2.08 -4.41 - -3.93 -1.78 -0.88 -1.32 0.71 -4.57 -5.61 -1.54 0.25 -0.03 -0.28 - - -5.62 -
0.2 0.32 0.6 0.07 0.17 0.16 0.16 0.13 0.29 0.29 0.11 0.09 0.81 0.44 0.51 0.78 -0.24 -0.65 0.23 -2.42 -2.85 -1.19 0.13 0.27 -2.84 -0.2 -0.6 -0.98 -0.24 -0.03 -0.06 0.09
0.26 0.68 0.64 0.67 0.55 0.13 0.28 0.26 0.26 0.1 0.58 0.17 0.38 0.53 0.98 0.68 -0.46 -0.22 -0.2 -1.6 -1.12 -2.41 -0.32 -0.22 -1.62 -0.28 -1.22 -1.02 -0.72 -0.71 -0.59 -0.3
0.71 0.0 0.03 0.3 0.04 -0.0 0.41 0.74 0.93 0.88 0.84 0.67 1.49 -0.34 -0.26 0.5 -1.85 -3.08 -0.92 - -5.92 -3.7 -0.55 0.01 -3.32 1.28 -1.45 -1.33 -1.0 -0.93 -0.08 0.16
0.42 0.54 0.49 0.57 0.39 0.4 0.3 0.23 0.31 0.18 0.14 0.14 -0.19 0.63 0.3 -0.04 -0.12 -0.92 0.18 -1.72 -1.03 0.37 -0.57 -0.65 -0.59 -0.69 -0.22 -0.63 -0.14 -0.1 -0.51 -0.37
0.61 0.24 0.18 0.29 0.11 -0.1 -0.3 0.26 0.49 0.56 0.68 0.75 1.23 0.2 -0.9 1.74 -1.58 -1.88 -0.18 -3.71 -1.34 -2.3 -1.03 -0.6 0.22 0.12 -0.1 -0.32 -1.05 -0.93 -0.94 -0.86
0.31 -0.0 0.06 0.21 -0.01 0.12 0.08 0.4 0.17 0.72 0.43 0.75 0.37 0.59 0.65 -0.01 -0.8 -1.63 -0.06 -0.67 -0.24 -0.05 -0.68 -0.64 -0.35 -0.49 -0.33 0.0 -0.42 -0.62 -0.21 -0.27
0.91 1.25 0.88 0.95 0.71 0.39 0.01 0.14 0.34 0.49 0.34 0.63 1.09 1.11 1.12 0.91 -1.62 -1.37 -1.57 -2.23 -1.77 -3.51 -1.71 -1.59 -2.04 -0.45 -1.3 -1.03 -2.27 -1.92 -2.17 -1.94
0.46 0.48 0.45 0.51 0.28 0.29 0.1 0.13 0.35 0.44 0.0 0.22 0.43 0.19 0.12 0.67 -0.19 -1.09 0.73 -4.94 -0.07 -1.1 -0.19 0.02 -0.23 -0.74 -0.65 -0.69 -0.11 -0.28 -0.96 -0.86
0.43 0.34 0.41 0.33 0.09 0.19 0.25 0.09 0.17 0.42 0.1 0.17 -0.2 0.17 0.76 0.09 -0.64 -1.26 0.36 -0.2 -0.27 -0.03 -0.51 -0.53 -0.1 -0.24 -0.12 -0.4 -0.81 -0.71 -0.1 -0.08
0.22 -0.05 -0.16 0.1 0.43 0.53 0.44 0.4 0.35 0.77 0.59 0.12 -1.12 0.23 1.17 -0.68 -0.94 -2.04 0.03 0.06 -1.0 0.23 -1.22 -0.84 -0.71 0.18 0.69 -0.23 -0.63 -0.64 -0.77 -0.38
0.34 0.44 0.25 0.16 0.19 0.29 0.13 -0.04 0.18 0.31 0.43 0.16 0.9 0.57 0.52 0.74 -0.06 0.09 0.2 - -3.81 -7.81 0.32 0.34 -4.12 -0.95 -0.95 -0.85 -0.01 0.09 -0.09 -0.08
0.36 0.22 0.2 0.18 0.07 0.22 0.22 0.1 0.17 0.37 0.42 0.19 0.49 0.62 0.41 0.69 -0.34 0.22 0.08 -4.62 -2.63 -1.18 -0.14 -0.14 -3.32 -0.1 -0.25 -0.28 -0.03 0.0 -0.11 -0.08
0.04 0.2 0.28 0.34 0.32 0.56 0.23 0.35 0.28 0.37 0.07 0.19 0.69 0.7 0.75 0.46 -0.82 -0.49 -0.2 -3.86 -0.98 -1.13 0.16 0.33 -1.31 -0.69 -0.46 -0.6 -0.53 -0.57 -0.17 -0.03
0.07 0.26 0.43 0.46 0.44 0.38 0.65 0.49 0.52 0.57 0.47 0.33 0.65 0.16 0.15 0.35 -0.34 -0.09 -0.26 -1.12 -1.3 -1.56 -0.41 -0.38 -2.07 -0.88 -0.51 -0.49 -0.1 -0.03 -0.68 -0.43
0.35 0.21 0.12 0.05 0.07 0.08 0.01 -0.02 0.16 0.1 0.09 -0.05 0.66 0.88 0.16 0.59 -0.12 0.03 -0.1 -1.26 -0.82 -0.65 0.59 0.67 -1.51 -0.67 -1.12 -1.1 -0.33 -0.19 0.01 -0.13
0.73 0.43 0.28 0.26 0.25 0.22 0.06 0.1 0.26 0.47 0.43 0.5 0.31 0.17 0.06 0.41 -0.25 -0.05 0.25 -1.76 -1.88 -0.68 -0.32 -0.17 -2.57 -0.6 -1.17 -0.91 0.21 0.37 -0.08 -0.02
0.86 0.3 0.07 -0.16 -0.1 -0.27 -0.23 0.12 0.16 0.23 0.46 0.55 1.15 0.73 0.19 0.87 -1.0 -1.11 -0.72 -1.25 -2.21 -2.64 0.12 0.41 -1.89 0.2 0.08 0.26 -0.49 -0.25 -0.59 -0.65
0.34 0.21 0.45 0.38 0.4 0.59 0.28 0.27 0.16 0.27 0.08 -0.02 0.47 0.2 0.7 0.37 -0.15 0.06 0.35 -2.01 -3.29 -1.73 -0.07 -0.13 -1.65 -0.56 -0.28 -0.34 -0.22 -0.04 -0.32 -0.25
0.46 -0.23 -0.04 -0.33 -0.02 -0.18 -0.27 0.43 0.43 0.82 0.91 0.62 1.49 -0.03 -0.01 1.45 -1.6 -1.51 -0.47 -2.32 -3.47 -2.33 -0.07 0.33 -4.26 0.48 -0.78 -0.72 -0.44 -0.29 -0.49 -0.15
0.78 0.33 0.33 0.23 0.15 -0.06 0.34 0.41 0.48 0.75 0.72 0.81 1.2 0.46 -1.08 1.21 -0.37 -0.72 -1.2 -6.08 -6.42 -4.16 -1.16 -0.7 -2.79 0.4 0.14 0.3 -0.5 -0.38 -1.29 -1.46
0.29 0.57 0.51 0.44 0.6 0.59 0.34 0.5 0.4 0.51 0.45 0.15 0.39 0.22 -0.41 0.61 -0.47 -0.44 -0.05 -2.62 -2.41 - 0.16 0.01 -4.31 -0.07 -0.34 -0.41 -0.22 -0.13 -0.72 0.04
1.61 0.35 0.28 0.0 -0.47 0.18 -0.3 -0.42 -0.18 0.36 0.53 0.94 0.94 1.0 -0.49 1.56 -0.57 -0.7 -0.03 - - - 0.56 0.76 - -1.43 -2.33 -1.95 -0.24 -0.2 -0.8 -1.49
0.14 0.34 0.26 0.17 0.4 0.39 0.38 0.11 0.1 -0.07 0.02 -0.14 -0.16 0.21 0.5 0.18 -0.32 -0.41 0.61 -3.31 -0.61 -3.87 -0.13 -0.05 -1.01 -0.12 0.05 0.27 -0.15 -0.08 0.4 0.19
0.69 0.71 0.67 0.51 0.35 0.32 0.28 0.2 0.33 0.37 0.43 0.35 1.45 1.02 -3.17 0.88 -2.55 -3.15 -0.93 -4.65 -1.46 -5.47 -0.27 0.34 0.25 -0.46 0.06 0.2 -1.56 -1.12 -1.6 -1.31
0.55 0.65 0.54 0.43 0.21 0.31 0.16 0.12 0.29 0.36 0.24 0.3 0.29 0.25 0.45 0.62 -0.42 -0.78 -0.17 -2.82 -0.95 -1.24 0.09 0.23 -1.24 -0.35 -0.51 -0.45 -0.26 -0.14 -0.61 -0.42
0.31 0.17 0.22 0.1 0.33 0.34 -0.04 0.17 0.46 0.46 0.37 -0.02 1.31 1.02 0.12 1.1 -1.03 -1.0 -1.91 -2.13 -1.17 -0.63 0.69 0.73 -2.12 -1.03 -0.88 -0.48 -0.83 -0.49 -1.16 -1.08
1.51 0.95 0.55 0.32 0.28 0.1 -0.5 -0.49 0.1 0.33 0.61 0.62 0.68 0.95 0.66 0.71 -0.75 -0.7 -1.89 -4.03 -4.6 -4.61 0.49 0.74 -2.02 -1.63 -1.63 -1.22 -0.64 -0.36 -0.82 -0.55
0.41 0.19 0.36 0.2 0.15 0.38 0.32 0.24 0.54 0.61 0.64 0.32 0.92 0.29 -0.29 0.73 -0.5 0.03 -0.37 -4.59 -2.88 -4.18 0.31 0.57 -2.04 -0.62 -1.07 -1.1 -0.36 -0.11 -0.09 -0.12
0.32 0.39 0.29 0.25 0.23 0.46 0.16 0.29 0.36 0.49 0.12 0.3 -0.13 0.05 0.67 0.41 -0.26 -0.43 0.26 -1.19 -1.07 -2.74 -0.33 -0.18 -0.88 -0.37 -0.48 -0.42 0.03 0.07 -0.23 0.04
0.38 0.61 0.49 0.39 0.23 0.44 0.3 0.36 0.4 0.45 0.16 0.07 0.99 0.46 0.01 0.82 -0.3 -0.75 -0.68 -0.58 -0.81 -0.91 -0.88 -0.52 -2.73 -0.68 0.05 -0.12 -0.5 -0.36 -0.69 -0.92
0.45 0.45 0.37 0.48 0.01 0.19 0.47 0.24 0.73 0.83 0.89 0.66 1.39 0.5 0.46 0.81 -0.52 -0.58 -0.96 - - - -1.18 -0.73 -2.06 -0.72 -0.56 -0.38 -0.63 -0.18 -0.88 -0.92
0.06 0.08 0.17 0.09 0.27 0.17 0.08 0.04 0.24 0.31 0.2 0.06 0.42 0.1 0.54 0.48 -0.38 -0.46 0.44 -6.34 -0.31 -1.98 0.06 0.09 -1.37 -0.05 -0.27 -0.41 -0.04 0.17 0.12 0.35
0.45 0.32 0.02 0.21 0.21 -0.3 -0.13 0.15 0.43 0.53 0.77 0.51 0.79 0.42 -1.64 1.02 -1.34 -0.94 -0.79 -9.55 -5.09 -1.31 0.15 0.45 -2.91 1.31 -0.12 0.16 -1.11 -0.75 -0.57 0.16
0.61 0.44 0.35 0.28 0.21 0.28 0.21 0.3 0.25 0.38 0.38 0.33 0.97 1.06 -0.18 0.92 -0.79 -0.84 0.01 -6.34 -3.46 -6.8 -0.62 -0.41 -3.78 -0.28 -0.24 -0.17 -0.37 -0.17 0.04 0.04
0.45 0.29 0.24 0.22 0.42 0.35 0.25 0.38 0.41 0.3 0.33 0.23 0.88 0.13 0.01 0.82 0.14 -0.35 -0.28 -2.36 -0.67 -1.28 -0.1 -0.63 -1.26 -0.58 -0.69 -0.33 0.0 0.1 -0.85 -0.72
0.68 0.29 0.29 0.26 0.31 0.33 -0.06 0.33 0.32 0.37 0.37 0.13 0.17 -0.03 -0.19 0.38 -0.65 -0.65 0.33 -1.77 -0.66 -1.19 0.1 0.42 0.0 0.23 -0.22 -0.04 -0.53 -0.48 -0.88 -0.84
0.51 0.58 0.51 0.41 0.52 0.58 0.17 0.29 0.24 0.42 0.21 0.15 0.52 0.43 0.6 0.61 -0.34 -0.32 -0.01 -2.98 -0.95 -2.99 -0.08 0.15 -1.84 -0.82 -0.85 -0.77 -0.42 -0.29 -0.35 -0.51
0.41 0.62 0.23 0.13 0.39 0.26 0.21 0.14 0.48 0.27 0.41 0.31 0.66 0.6 1.16 0.48 -0.57 -1.66 -0.4 -1.82 -0.23 -3.86 -0.68 -0.44 0.55 -0.04 -0.51 -0.31 -0.73 -0.64 -1.5 -1.57
0.03 -0.04 -0.32 -0.05 0.17 0.19 0.22 0.35 0.39 0.4 0.41 0.25 0.09 -0.82 0.8 0.07 -0.66 -0.7 0.13 -0.09 -0.05 -0.48 -0.08 0.26 -0.95 0.34 0.18 -0.01 -0.49 -0.11 -0.65 -0.53
0.53 0.44 0.4 0.26 0.33 0.55 0.28 0.08 0.05 0.28 0.41 0.38 -0.28 0.15 0.06 0.66 -0.29 -1.11 0.6 -1.74 -0.6 -0.27 -0.44 -0.53 -1.31 -0.01 -0.42 -0.26 -0.05 0.15 -0.88 -0.68

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.