Heatmap: Cluster_282 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
-4.21 - - 0.65 2.83 - 1.24 -4.19 -5.46 - -5.93 - -2.5 -5.38 - -5.2 2.28 -0.19 - - - - - - -3.54 -3.01 - - - - - - -5.82 -1.8 2.85 3.39 - - - -3.12 - -0.09 - - 2.08 2.06 - 1.8 1.42 - - -4.2 2.39 0.56 -1.41 - - -
1.81 -0.8 -0.41 0.09 -0.96 -1.6 0.24 -0.38 0.09 -0.44 -0.37 -0.6 -0.01 -1.57 -1.6 -1.06 0.7 0.21 -0.51 -1.29 -2.11 -2.53 -1.55 -1.92 -2.32 -0.45 -2.22 -1.88 -1.85 -1.7 -1.24 -0.96 -0.77 -4.44 0.63 -0.27 1.0 0.89 0.8 0.78 0.4 0.45 1.13 1.08 0.67 1.46 -4.59 2.01 0.25 1.06 0.72 -2.77 0.03 0.1 0.32 -0.28 -0.51 -1.25
-0.33 -2.48 -0.81 -0.36 -3.37 -1.9 -1.94 -1.7 -1.12 -1.1 -1.08 -1.02 0.47 0.23 0.05 -0.12 1.1 -0.0 -1.54 -1.66 -0.16 -0.51 -0.05 -0.26 -0.24 -1.47 -0.84 -0.3 -0.57 0.13 -0.48 -0.55 -0.22 0.27 0.61 -0.56 0.85 0.96 0.5 0.5 0.44 0.45 0.54 0.68 0.35 2.58 -1.39 1.59 0.22 -0.59 -2.52 -1.04 0.66 -0.32 0.52 -0.42 -1.18 -0.65
- - 3.9 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.48 - - 4.32 - - - 3.58 - - - - -
-1.29 -2.7 -0.83 1.67 1.44 -4.58 0.97 -3.8 -4.18 -4.45 -4.27 -4.17 -1.4 2.16 1.45 1.1 1.43 0.89 -2.08 -3.11 -1.09 -1.95 -2.17 -2.35 -2.08 -1.51 -1.45 -1.1 -0.4 -0.48 -1.33 -1.46 -1.15 -3.45 -0.05 -0.54 0.66 0.41 0.4 0.52 0.41 0.15 1.03 0.33 -0.41 0.97 -2.14 1.31 -0.79 -1.53 -3.29 -1.15 0.45 1.05 0.51 0.91 -0.36 0.34
-1.08 -0.74 1.33 -0.13 -5.78 - -6.56 - -9.12 -9.19 - - 1.83 -0.95 -0.65 -1.11 2.87 2.37 -1.34 -0.48 -0.31 0.46 0.17 -0.49 0.02 -0.79 -0.79 -0.3 -0.48 -0.58 0.05 -0.08 0.03 1.09 0.86 -0.53 -0.72 0.29 -0.53 -0.15 -0.69 0.05 -1.34 -0.65 0.48 0.12 -1.08 1.44 0.12 0.44 0.19 -0.61 0.78 -0.94 -5.26 -4.49 -4.67 -1.63
- -5.88 0.44 4.6 - - -5.0 - - - - - -0.32 -1.42 -3.53 -2.46 -0.36 -0.85 -4.43 -6.03 -4.89 4.04 - -4.61 -5.45 -0.36 0.72 -3.86 -3.95 -6.0 -6.35 -7.31 -4.21 - -2.08 - -1.94 -0.93 -2.21 -2.65 -0.21 -1.7 -3.14 -1.59 -3.27 -6.8 -4.88 -1.96 -6.97 -4.0 -2.05 -4.14 -0.84 2.59 - - - -
- - - - - - - 0.43 1.88 - - - 2.25 - - - 3.17 1.5 - - - - - - 1.55 - - - - - - - 3.11 - - - - - - - - 3.68 - - - - - - 3.06 - - - 1.86 - - - - -
- - - - - - - - - - - - - - - - - - - - - 1.88 - - - - - - - - - - - - 4.01 - - - - 4.31 - 1.36 3.95 - - - - - - - - - -1.66 - - - - -
- - 4.45 - 3.96 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.51 - - - - - 2.23 3.86 - - - - - - - - -
0.04 -0.04 2.29 2.69 - - - - - - - - -1.5 - - - - - - - - -0.51 - - - - - 0.06 - - - - - - - - - 0.21 - - - -2.92 - - - 3.49 - 2.19 -0.05 3.55 -0.49 0.46 2.23 0.17 1.15 0.91 -0.21 -
-3.42 0.63 -1.89 -1.31 2.01 -0.1 -0.02 -0.62 -0.69 -0.27 -0.25 -0.34 -1.16 -0.31 -0.42 0.27 1.77 -0.62 -3.49 -3.99 0.33 -7.24 -0.1 0.31 0.32 -2.68 -4.41 0.62 0.31 1.14 2.36 1.76 1.6 1.19 1.94 -2.24 -5.11 -6.6 - -7.15 -5.64 -5.8 -6.49 - -4.14 -3.24 -6.58 3.16 -3.59 -5.47 -5.48 -4.79 0.43 -4.02 -6.43 -5.35 -7.31 -4.34
- - - - - - - - - 0.71 - - - - 5.28 4.12 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 3.45 - - - - - -2.48 - - - - - - - -0.31 - - - -0.83 - - - - - -0.69 - - - 0.29 -0.6 -2.81 - 3.05 1.44 - 2.69 - - - 1.16 2.36 - - - - 0.66 2.51 - - - 2.19 2.63 - - - -
-0.81 -4.44 -0.47 -4.12 -6.36 -6.46 - -6.64 -3.83 -5.16 -4.82 -4.9 0.56 0.69 0.51 0.57 2.06 2.7 0.59 -1.68 -1.1 -1.81 -1.48 -0.58 -0.64 -1.24 -0.05 -2.67 -5.31 -3.33 -7.71 -4.31 -3.61 -0.9 -0.1 -2.21 -0.82 -0.18 -1.7 -1.65 -0.48 -1.17 -2.06 -2.66 -1.35 2.4 -1.11 2.59 -0.58 -2.28 -4.28 0.45 1.94 -0.88 2.46 -0.9 -3.17 1.77
0.98 -2.33 0.97 -5.52 -8.83 -7.7 -9.48 -7.16 -6.19 -4.49 -4.09 -4.29 0.41 -0.42 -0.28 -0.23 2.92 1.98 0.2 -1.97 -2.53 -2.32 -2.26 -2.46 -2.76 -1.49 0.7 -2.81 -3.99 -3.1 -4.08 -4.01 -3.53 -1.07 0.38 -1.47 -0.39 0.58 -0.94 -1.36 -1.15 -0.75 -0.89 -0.74 -1.23 3.62 -0.56 1.72 -0.64 -1.39 -3.99 1.07 2.01 -0.9 -1.65 -1.59 -3.26 -0.1
- - -1.89 - - - - - - - - - -0.39 2.06 -0.74 -0.25 - -1.95 -2.32 -2.72 - 1.43 - - - - - - - - - - - -2.15 -3.34 -0.7 2.19 2.1 3.05 3.42 3.13 2.29 -1.33 0.08 2.08 - - - - - - - -7.99 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - -
- - - - - - - - - - 1.87 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.76 - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 4.48 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.04 - - 5.09 - - - - - - - -0.77 - - - - -
- - - 3.14 2.65 - 1.63 -3.31 -1.83 - - - - -0.25 -1.39 - - 2.41 - - - - - - - - - - - - - -2.49 - - - - - - - 2.18 2.69 -0.41 2.83 - - - - 1.7 -0.06 - - - 1.33 2.84 - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.93 - 0.38 - - - - - - - - - 0.22 - -0.3 -0.75 - - 3.42 1.74 - 3.5 - - - - - - - - - - - - - - - - - - - - - - - 2.12 - 1.57 - - - - 1.99 3.3 - - - -
- - 1.19 - 4.11 - -1.11 1.7 0.83 -0.71 -1.04 -1.27 - -3.36 -2.99 -2.42 0.92 -3.96 - - 0.82 - - -3.18 -1.29 0.6 -1.1 -2.21 0.08 -1.04 - - - - -0.86 - 1.47 0.67 2.85 0.69 0.52 1.31 -0.48 1.56 - - - -1.69 -2.23 - - - 0.24 - - - - -
4.0 2.44 0.78 - 4.35 0.23 0.77 0.21 -0.65 0.52 -2.63 0.57 -0.5 - - - - -1.42 0.89 - - - - - - - -1.14 - - - - - - - - - - 0.3 - - - -0.25 - - - - - - -1.35 - - - -0.3 - - - - -
0.25 -3.56 -1.13 -5.57 -7.3 - - - - -10.41 - -9.36 0.26 -0.15 0.1 0.91 2.03 -1.51 -2.27 -4.51 -8.47 -1.26 -6.06 -6.6 -4.61 -3.11 -1.22 -6.63 -5.45 -6.44 -8.62 -6.68 -5.55 - 1.05 -0.87 2.97 2.35 1.31 1.68 0.88 1.59 2.19 2.96 -0.52 -0.3 -4.56 1.24 -3.1 -8.87 -8.85 -6.17 0.92 -2.51 -5.56 -2.37 -1.2 -2.24
0.72 - 1.14 -0.63 0.42 - - - - - - - 2.23 -0.13 1.06 1.33 4.16 3.57 - - - - - - - - - - - - - - - - - - - - - - - -3.08 - - - 2.15 -0.24 1.48 -1.34 0.31 - - 0.87 -0.57 - - - -
- - 3.63 1.82 - - - - - - - - - - - 0.79 - 1.72 - - - - - -0.28 0.72 - 0.9 - - 3.01 - 0.26 - - - - - - - - - - - - - - - 4.0 - - - - 2.03 1.81 - - - -
-0.98 -1.38 0.66 - - - - - - - - - -5.69 -1.34 -2.21 -5.07 0.08 -1.12 -1.14 -3.92 -5.71 -1.77 - -4.39 -5.53 - - - - -3.62 - -6.45 -4.77 - - - - - - - - - - - - 3.03 3.93 -1.07 -2.56 1.71 - 1.75 4.43 -4.85 - - - -
- 2.45 - 2.07 - 3.55 - - -0.5 - - 0.52 - - - - - - - - - 2.44 - - - - 1.5 - - - - - - - - - - - - - - - - - - 3.0 - 1.25 1.29 - - - 2.91 - 2.56 - - -
- - 0.82 -0.81 1.21 -0.94 - -1.93 -1.35 -1.3 -3.08 -2.2 1.39 -0.32 -1.22 - -0.98 - 0.72 2.76 1.68 - 1.08 2.09 1.78 - - -0.26 1.5 1.4 0.51 1.03 1.42 3.04 1.86 - - - - - - - - - - - - - -1.51 - - -0.73 -1.33 - - - - -
- - - - 3.12 - 1.53 - - - - - - 3.54 0.45 -0.13 - - - - - - - - - - - - - - - - - - - - - 2.08 - 2.82 - -1.1 - - - - - - 2.77 - - - -3.23 3.79 - - - -
- - - 2.33 - - - - - - - - 1.75 - - - - - - - - - - - - - - 2.58 - - - - - - - - - - - 3.8 - 1.45 - - - - - - 3.56 - - - 3.92 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - -
- -2.89 - 1.13 -2.37 - - -5.95 - - - - -3.28 - - - 2.79 -5.14 - - -1.29 -2.32 -3.28 -3.2 -1.55 -0.04 - -1.15 0.47 0.2 -0.39 1.27 2.36 0.09 3.11 1.26 1.54 1.11 2.16 1.34 1.02 1.44 -0.26 -1.26 2.11 - - -3.09 -1.59 - - - -4.0 - - - - -
- - - - - - - -0.79 - - - - -0.7 2.01 1.0 0.14 - - - - - - - - - 0.96 - - - - - 0.75 2.42 - - - - - - - - -2.51 3.2 - - - - - 4.0 - - - 3.94 - - - - -
-1.13 -1.56 0.76 -2.29 -6.78 - -6.35 - -9.14 -5.39 -4.3 -5.22 1.48 -1.0 -0.98 0.21 2.22 0.28 0.37 -0.2 -0.74 -3.38 -0.66 -1.56 -2.1 -3.81 -3.58 -0.09 -1.48 -0.35 -0.49 -1.82 -1.96 -2.91 1.23 -0.34 0.93 1.39 -0.39 0.59 0.28 0.64 0.84 1.49 0.46 2.41 -0.51 1.95 -1.25 -5.76 -7.31 -0.26 1.96 0.03 -0.58 -1.17 -3.32 -0.47
2.64 2.08 2.33 -2.7 -6.29 - -6.92 -8.68 -11.51 - - - 1.84 1.47 1.83 1.73 2.36 3.24 -0.11 -0.41 -0.17 0.29 0.33 -0.6 -1.97 -4.15 -0.26 -0.22 -1.3 -2.54 -2.98 -2.89 -1.86 -4.76 -4.24 -7.08 -5.65 -3.27 -4.24 -4.14 -3.48 -4.55 -4.93 -5.21 -6.1 -0.13 -1.97 -2.67 -1.31 -1.18 -0.31 -0.79 0.09 -1.73 -2.41 -6.86 - -3.51
-3.81 - -3.08 -4.73 -1.52 - -4.36 -9.11 - - - - - -6.27 - -8.26 0.96 3.5 -4.25 -4.91 - - -6.2 -5.7 -8.28 -5.98 - -5.8 -6.0 -5.22 -4.73 -5.44 -5.49 - -4.53 - - - - - - - - - - 3.51 3.01 0.91 -3.64 -0.56 -0.25 -0.34 3.46 -3.1 -4.02 - - 3.17
- - - 5.01 3.64 - 1.83 -2.22 -2.34 - - - 0.18 - - - -0.95 - - - - - -1.48 - - -0.93 -1.91 - - - - - - - - - - - - 2.06 - -1.43 - - - - - - -1.77 - - - -3.62 -0.0 - -0.59 - -
- - -1.42 5.2 2.76 - -0.16 -1.82 -2.02 - - - -2.67 - - - -1.09 -1.77 -0.62 - - - - - - - - - - - - - -2.99 - - - -0.2 - - -0.62 - -1.19 - - - - - - 1.05 - - - -1.24 2.15 - - - 1.08
-0.98 -3.18 -0.83 -3.72 -4.93 -4.22 -6.6 -3.9 -4.48 -4.3 -3.78 -3.96 1.59 1.4 1.34 1.43 1.56 0.77 -1.6 -2.71 -0.52 1.25 0.02 -0.38 -0.88 -3.18 -0.45 -0.81 -1.96 -1.04 -1.7 -1.88 -1.38 -2.0 0.68 -0.03 0.99 1.12 0.42 0.5 0.26 0.47 0.77 1.08 -0.28 0.49 -0.69 1.03 -0.5 -2.69 -5.48 -1.44 0.78 0.06 1.44 0.79 -0.5 0.72
- - - 3.89 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.94 - - - 3.64 - - - - -
- - - - 2.85 - - - - - - - - - - - - - - - 1.35 - - - - - 1.03 - - - 1.51 2.17 3.07 - - - - - - - - - - - - - - - 4.48 - - - 3.03 - - - - -
- - - - - - - 1.14 - - - - - - - - - - - - - - - - - - - 3.06 - - - - - - - - - 4.19 - - - - - - - - - - 4.87 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.32 - - - - - - - - - - - - - - - - - - - 5.25 - - - - - - - - -
- - - - 3.87 - - - - - - - 2.39 - - - - - - - - - - - - - - - - - - 1.48 2.12 - - - - - - - - - - - - - - - 4.82 - - - 1.5 - - - - -
-0.82 -4.4 -1.32 -0.81 -3.81 - - - - -4.19 -2.7 -4.35 -0.29 -3.19 -5.27 -2.64 2.19 -0.56 -3.03 -3.03 -2.59 - -5.23 -2.87 -3.59 -4.83 - -3.05 -2.45 -2.34 - -3.89 -1.82 -1.01 3.15 -0.27 -1.3 -0.57 -0.81 -0.59 -0.81 -0.2 -2.67 - 0.64 -1.06 -2.25 4.15 -1.31 - -3.95 -0.46 3.38 -1.83 -1.52 -1.99 -0.04 -0.72
- - - - -0.58 1.84 -0.28 0.56 1.78 0.82 1.86 1.57 - - - - - -0.06 - - -1.7 - - -1.42 -0.35 - - -0.93 -2.18 1.48 0.22 1.05 2.04 4.31 0.12 - - - 1.51 - - -0.59 - - - - - - 0.07 - - - -0.23 - - - - -
- - - -0.78 - -0.21 1.2 0.34 0.76 -0.18 0.61 0.09 - - - - - 0.27 - - - - - - - - - -1.31 - - - -0.16 -0.36 2.08 - - - 2.44 3.86 1.84 - 1.21 2.35 2.32 - - - 0.8 -1.48 - - - 1.17 - - - - -
- - - - - - - -4.02 -0.28 4.02 4.18 4.3 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.26 -1.82 - - - - - 1.21 - - - -
-1.56 -2.61 0.37 -4.06 -4.47 0.32 -5.19 -0.58 0.57 0.64 0.55 0.72 -2.43 -1.27 -0.25 0.1 0.74 -1.05 1.02 1.5 1.36 0.78 0.57 0.89 1.39 0.3 0.08 0.22 0.86 0.07 -3.31 -0.83 0.01 -2.58 -1.63 -4.13 -3.47 -2.05 -2.4 -1.49 -3.41 -2.0 -2.34 -0.56 -4.36 0.7 1.3 1.32 -3.48 -4.22 -6.55 0.76 0.42 0.3 1.19 -2.2 -5.19 2.0
-0.0 - 0.76 3.49 -0.58 -0.06 - 0.44 -1.4 - -2.1 -1.47 -1.07 - - - -1.44 -0.47 - - - 0.47 - - - 0.09 - - - - - -2.14 -0.02 - - - 2.44 1.05 1.49 0.12 1.49 1.42 2.66 1.53 1.33 -1.76 - - 1.53 - - - 0.7 0.09 - -1.09 - -
- 2.89 - 3.17 3.03 - - - - - - - - - - - - - - - 0.95 - - - - - - - - - - - - - - - - - - - - 1.59 - - - - - - 4.48 - - - -1.78 - -5.52 2.54 - -
- - -0.3 - - - - 2.38 1.62 -1.12 -3.49 -2.42 -2.52 1.34 1.96 1.06 2.21 - - - - 3.64 - - - - - - - - - - -1.85 - - - 1.0 0.01 2.04 0.46 2.04 -1.0 0.03 - - - - 1.49 -2.72 - - - 1.67 0.88 - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.