Heatmap: Cluster_63 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
-3.04 -2.12 -2.06 -7.07 -1.15 - 1.63 - -10.34 - - - -2.75 -5.15 -5.11 -5.27 -2.66 -4.65 -4.4 -8.45 -3.38 -1.43 -7.03 -4.49 -3.37 0.38 -1.34 -3.63 -1.92 -3.69 -5.87 -4.31 -3.25 -3.24 -1.53 0.75 2.88 2.41 2.41 2.52 2.11 2.37 2.45 2.43 1.93 -6.0 - -3.56 -7.72 -3.35 -2.65 -6.39 -5.98 -5.03 - - -5.73 -
-7.81 - - -2.4 0.1 -6.6 0.58 -8.47 -9.04 -8.03 -8.55 -9.81 -7.4 -7.5 -2.75 -1.28 - -6.64 - - -6.44 -0.2 -5.11 -6.71 -7.06 -1.16 -5.99 -5.5 -6.37 -5.17 -3.31 -4.17 -4.42 -5.4 -4.27 0.46 2.1 2.01 2.1 2.42 2.39 2.95 1.49 2.43 3.58 -5.3 -8.52 -4.36 -2.76 -5.2 -5.78 - -2.38 -7.19 - - - -5.68
-7.43 - -11.46 -10.71 -9.65 - -10.31 - -12.88 - - - -9.38 - - -12.18 -10.29 -12.13 - - - -6.56 - - - -5.16 -2.0 - - - - - - - - -6.36 3.34 3.23 2.99 2.74 2.54 2.34 2.69 2.34 0.17 - - - -10.41 - - - -12.82 -6.3 - - - -
- - - -5.43 - - - - - - - - - - - - - - - - - 0.2 - - - 0.37 -3.73 - - - - - - - - -0.14 2.73 2.73 1.89 3.0 2.85 2.74 1.42 1.6 3.32 - - - -7.19 - - - -7.55 - - - - -
- - - - -2.49 -4.66 -0.5 - -4.64 -6.21 -6.02 - - - - - -4.42 -2.71 - - - -1.51 - - - 0.21 -5.03 -4.87 - - - - -5.84 - -0.41 -0.66 2.45 2.9 1.52 3.06 2.76 3.14 2.38 2.55 1.46 -5.08 - -2.28 -5.24 - - - -6.7 - - - - -
- -5.43 -2.46 -0.19 -3.8 - - -6.7 - - - - -6.33 -0.14 0.82 0.8 -2.74 -4.49 - -1.13 - -1.38 -2.44 -5.09 -5.56 -4.68 -2.13 -3.3 - -5.16 -6.52 -5.69 -4.74 - -1.09 - 2.83 2.65 2.44 2.94 2.36 2.23 2.66 2.59 0.38 -6.02 - - -3.94 - - - -4.97 -5.76 - -3.34 - -
- -6.23 - -3.31 -2.11 -3.55 -4.02 -3.26 -4.7 -3.0 -4.6 -4.02 -4.52 - - -7.27 -2.68 -6.2 - - - - -6.99 -8.67 - -3.15 -2.02 - -6.53 - - - -6.23 - - -2.26 3.0 2.82 3.03 2.54 2.39 2.35 2.83 2.56 1.93 - - - -3.93 -6.02 - - -7.45 -5.62 - - - -
-1.71 -2.31 -0.72 0.62 0.03 -1.83 -0.53 -1.82 -2.04 -1.98 -2.05 -1.96 -0.97 -1.24 -0.88 -0.99 -1.26 -0.65 -2.13 -2.28 -1.61 -0.42 -2.53 -1.95 -1.8 -0.04 -1.11 -1.67 -1.53 -1.32 -2.51 -1.94 -1.92 -2.08 -1.95 -0.82 2.22 2.47 2.49 1.58 2.36 1.85 1.08 1.59 1.57 -2.03 -1.11 -1.08 -0.76 -0.53 -0.51 -0.59 -0.42 -0.63 -2.07 -2.67 -1.73 -0.03
0.62 -0.03 -0.29 -2.35 0.79 -5.92 0.36 -6.62 -4.42 -3.61 -3.89 -3.87 -1.75 -1.21 -1.37 -1.64 -3.17 -2.28 -0.04 -0.06 -3.29 -1.51 -3.53 -3.48 -3.99 -1.48 -3.15 -3.53 -3.75 -4.02 -3.59 -3.47 -3.99 -2.54 -1.18 -0.47 2.75 2.29 2.72 2.28 2.14 1.86 1.98 2.29 1.3 -3.43 -3.28 -2.94 -2.72 -2.16 -1.43 -2.22 -2.06 -1.79 -6.23 -5.05 -3.0 -2.93
-7.19 -8.43 -6.53 -6.85 -3.89 - -8.49 -8.77 -11.13 -11.92 - - -7.92 -9.04 -7.3 -8.61 - -8.4 - - -7.25 -1.56 -7.35 -6.81 -6.35 -0.52 -3.02 -8.56 - - -7.69 -6.15 -5.7 - -6.21 -1.71 2.63 3.1 2.6 2.89 3.42 2.59 0.79 1.57 2.71 -9.08 -8.52 -4.04 -9.59 - -8.42 - -8.98 -4.69 - -7.24 -8.44 -4.44
- - - -3.21 -2.32 -2.85 -1.87 -4.57 -5.93 -4.65 - - - - - - - - - - - -2.84 - - - -1.59 -4.14 - - - - - -4.38 - - 1.76 2.95 2.98 2.09 2.4 2.94 2.59 1.18 0.81 3.29 -3.09 - -4.03 -2.98 - - - -7.43 -1.94 - - - -
- - - - - - - - -4.27 - - - -4.37 - - - - - -2.03 - - - - - - 0.33 -3.07 - - - - - - - - -2.59 3.3 3.31 2.65 2.78 2.78 2.56 1.42 1.82 2.08 - - - - - - - - -3.53 - - - -
- - -0.38 - - - - - - - - - - - - - - - - - - - - - - - -0.98 - - - - -0.12 0.96 - 1.98 - 2.86 2.83 2.93 3.0 2.93 2.77 1.92 - - - - - 0.76 - - - -4.87 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - -4.78 -2.73 -4.62 - -2.29 - -4.46 -3.97 -2.97 - 1.07 -0.33 3.25 2.45 2.99 1.64 2.28 1.86 3.55 3.02 - - - - -4.47 - - - - - - - - -
-6.11 - - -2.87 -7.28 - - -11.19 -10.53 - - - - - - - -8.19 - -6.72 - -6.24 - - -8.22 -5.7 -1.94 -2.03 -5.81 -5.34 -4.23 -5.03 -3.59 -2.03 -2.4 1.88 -0.11 2.85 2.29 3.08 2.43 1.71 2.1 3.09 3.05 0.04 -4.28 - - -3.1 - -7.79 - -9.61 -7.92 -6.68 -6.45 -1.18 -
-7.48 - - -3.83 -8.65 - - -12.56 -11.9 - - - -9.13 - - - -9.56 - -8.09 - -7.61 -5.18 - -9.59 -7.07 -1.31 -3.66 -6.8 -6.71 -5.23 -6.4 -4.83 -2.74 -3.77 0.49 -0.15 2.75 2.31 2.35 2.39 2.21 2.05 3.79 2.93 1.3 -6.01 - -7.78 - - -9.16 - -10.38 -9.29 - -7.82 -4.25 -
-4.08 -4.4 -5.19 -3.74 -2.1 0.97 -2.49 0.61 0.36 1.02 0.97 0.85 -4.8 -3.6 -4.59 -2.95 -2.37 -1.35 -8.76 -10.43 -7.01 -3.8 -9.74 -7.52 -5.13 -1.45 -3.65 -6.98 -4.01 -5.76 -6.7 -4.77 -2.44 -5.43 0.18 0.13 2.81 2.08 2.16 2.23 1.46 1.79 2.96 2.74 0.63 -8.24 -11.82 -9.51 -7.39 -5.36 -3.77 -8.09 -7.96 -9.2 -9.24 -9.87 -8.78 -10.16
-4.57 -4.79 -4.07 -0.82 0.78 -1.94 -0.55 -1.53 -0.92 -1.3 -1.35 -1.46 -5.34 -6.57 -7.87 -5.33 -3.02 -2.48 -3.47 -4.48 -3.22 -6.64 -6.11 -4.2 -4.66 -1.64 -3.49 -2.85 -2.77 -2.91 -4.32 -4.51 -4.19 - -5.76 -4.59 2.73 2.59 2.43 2.7 2.24 2.24 2.68 2.67 1.03 -1.54 -3.29 -1.87 -4.54 -5.14 -7.17 -2.05 -1.41 -3.02 -2.72 -5.24 - -1.56
- - -8.2 -2.04 -4.18 - - - -11.35 - - - -8.6 -10.66 -5.89 -6.34 -7.04 -9.69 - -8.79 - -3.99 - - - -0.65 -1.95 - - - - - -9.18 - -7.41 -0.24 2.66 3.11 2.26 3.04 3.17 2.87 0.94 1.89 2.56 - - -6.3 - -6.48 -6.49 - -10.63 -8.74 -7.27 - - -
- - - -5.26 - -3.77 - -0.78 -1.21 -0.88 -0.29 -0.12 -3.85 -3.74 -5.49 -4.59 -1.78 -3.4 - - - - - - - -3.23 -3.54 - - - - - - - - - 2.97 2.26 2.67 2.07 1.72 2.37 3.6 3.15 -0.16 - - -3.42 -4.45 - - - -7.18 - - - - -3.15
- - - - - -1.42 - 0.54 -1.3 -3.7 -1.62 -2.06 -4.0 -4.21 - -2.03 - - - - - - - - - - -3.64 - - - - - - - - - 3.02 2.52 2.71 2.86 1.9 1.95 3.56 2.75 -0.15 - - - - - - - -7.9 - - - - -
- - - -2.53 - - - - -8.23 - - - -5.09 - - -6.52 - -6.14 - - - -1.68 - - - 0.3 -3.96 - - - - - - - - 1.77 2.94 3.06 2.6 2.51 2.79 2.56 2.0 1.68 2.25 - - - -5.29 - - -5.45 -7.56 - - - - -3.09
-3.97 -5.49 -1.36 -2.04 -4.13 -8.24 -6.22 -7.36 -6.53 -8.17 - - -1.49 1.83 1.28 0.79 -0.84 -0.96 -5.05 -4.31 -0.19 -1.06 -1.48 -0.81 -0.19 1.46 0.14 -0.38 -0.08 -0.49 -1.08 -0.97 -0.64 -4.27 -0.81 -0.95 2.06 1.81 1.59 1.8 1.67 1.71 2.06 1.78 1.57 -0.4 -2.82 -1.74 -0.36 -1.03 -3.06 -2.81 -1.23 0.3 -6.1 -4.17 -3.35 -
-2.38 - -1.77 2.64 1.53 - -1.36 -2.93 - - -4.82 - 0.86 - - - - -3.18 - - - - - -2.93 -3.95 0.6 -3.11 - - -2.32 - -2.54 -2.75 - - 0.18 1.69 1.66 1.43 0.55 2.75 2.25 1.81 2.79 3.2 -2.43 - -3.37 -3.33 - - - -7.37 -2.56 - -1.83 - -
- - - - 0.65 - -1.06 -5.72 - -5.02 -5.05 -4.78 - - - - - -5.27 - - - -0.56 - - - - - - - - - - - - -1.33 1.04 2.64 2.67 0.37 3.18 2.57 3.01 2.15 2.95 1.85 - - - - - - - - - - - - -
-4.98 - -3.73 -0.67 -1.87 - - - -7.72 - - - -0.32 -1.26 -0.42 -0.35 - -2.86 -3.59 -4.13 - -2.4 -5.64 - - -1.35 -2.7 - - - - -6.83 -4.97 -2.57 0.48 -3.12 2.65 2.73 2.02 2.24 1.95 2.32 2.7 3.31 1.98 -5.97 -5.57 -2.94 -3.81 - -2.63 - -7.83 -4.22 -4.86 - -4.16 -
-9.9 - -5.47 -7.22 -6.98 -7.03 -7.39 -6.37 -6.38 -7.61 -7.62 -7.22 -4.06 -5.69 -2.86 -1.14 -7.13 -4.27 -7.36 -8.3 -6.79 0.15 -6.98 -6.88 -7.61 -2.67 -1.26 -6.94 -8.12 -6.69 -6.67 -7.16 -8.76 -4.41 - -3.28 2.4 2.97 2.11 2.73 2.96 2.73 1.94 3.1 2.11 -10.4 -10.25 -6.92 -5.99 - -8.52 - -4.66 -6.56 - -10.11 -10.22 -5.51
0.38 1.54 0.95 -6.2 - - - - - - - - -3.31 -3.78 -3.46 -3.53 - -2.6 2.35 1.03 - 0.73 - - - -5.81 -7.76 - - - - - - - -3.8 -4.55 2.56 2.37 1.93 2.09 2.38 1.89 1.3 1.97 0.67 -0.68 -5.01 -1.91 -4.68 -4.42 0.87 -1.66 -2.13 -2.22 -3.52 -2.63 -3.39 1.3
- - - - -1.19 - -1.92 - - - - - - -4.86 - - - - - -3.96 - - - - - -3.39 -4.68 -3.51 - - - -6.0 - - - -1.99 3.29 2.84 2.19 2.9 2.86 2.66 2.67 2.07 1.72 -3.39 - - -2.56 - - - -7.6 - - - - -
- - - - - - - - -3.92 - - - -2.52 - - -2.1 -1.68 - - - - - - -3.03 - - - - - - - -3.8 - 1.19 - 0.51 1.88 3.42 1.39 4.07 - 2.13 2.79 2.42 1.33 - - - -2.37 - - - -2.48 - - - - -
-5.32 - - - - - - - -8.38 - - - - - - -7.71 - -4.97 - - -6.26 -0.2 - -6.64 -5.94 0.74 -4.41 - - - - - -6.29 - -1.14 2.3 2.69 2.37 2.32 2.73 1.98 2.46 2.21 2.77 2.51 - - - -3.66 - - - -9.24 - - - - -
0.09 -4.14 -1.76 -0.69 -1.42 - -0.06 -7.69 - - - - -0.87 -3.36 -1.54 -1.93 -2.99 -0.25 -2.21 -2.87 -3.95 -0.41 - -3.4 -5.93 -1.19 -0.86 -5.29 -2.75 -4.45 -3.96 -4.53 -4.88 0.11 0.2 -0.01 2.94 1.6 2.01 2.02 1.48 1.91 2.93 3.15 1.1 - -5.89 -1.72 -0.65 - 0.12 -3.64 -2.72 -3.0 -4.18 - -3.34 -
-6.89 - -9.15 -6.31 -8.82 - -8.54 - -11.2 - - - -6.89 - - -11.79 - -5.86 - - - -7.77 - -10.92 -10.98 -8.67 -3.98 - -9.99 - -10.28 - -8.11 - -5.75 -6.55 2.78 2.27 2.54 2.45 1.8 2.12 3.7 3.06 -0.64 -1.34 - -1.91 -6.32 - - - -9.0 -2.46 1.2 -4.94 -9.37 0.86
-7.36 -8.37 -5.29 -4.61 -8.83 - - - -10.61 - -11.18 - -4.08 -0.83 -1.18 -1.28 -8.18 -6.52 - -7.53 -10.32 -0.54 - -8.67 -10.04 -0.25 -2.62 -7.03 - -9.11 -7.91 -8.51 -8.36 -6.94 -4.37 -0.08 2.42 2.65 2.18 2.83 2.68 2.75 1.69 2.43 3.12 -9.6 -8.51 -8.87 -6.7 -8.78 -7.58 -8.66 -8.46 -7.73 -8.93 - - -6.44
- - - -1.96 - - - -3.29 -4.0 - -6.94 - -1.61 0.27 -0.34 -0.28 -3.69 -4.75 - -5.33 -2.56 -0.12 -4.32 -6.25 -3.61 0.23 -0.44 -3.13 -3.12 -3.62 -4.69 -2.66 -1.84 - 1.12 -0.29 2.87 2.34 2.08 2.72 2.03 2.16 2.55 2.44 1.63 -1.54 -5.69 -4.58 -1.3 -3.28 -5.71 - -5.55 -1.76 - - - -
-3.83 -5.86 -10.62 -4.01 -6.59 - - -11.91 -11.99 - - - -6.53 -8.7 -6.68 -5.25 -1.46 -2.94 -9.05 -10.3 -10.21 -1.79 -10.61 -9.17 -9.74 -2.58 -4.28 -6.74 -7.32 -7.88 -8.1 -8.75 -9.35 - -8.92 -1.06 2.56 2.54 1.91 2.76 2.14 2.25 2.67 2.82 1.29 -1.18 -3.56 -1.89 2.46 -5.87 -7.51 -3.03 -0.64 -2.44 -0.48 -2.85 -8.28 -0.28
- - -4.21 -7.6 -7.08 - -8.4 -8.62 -10.05 -11.64 - -12.82 -1.38 0.21 1.5 1.28 - -1.63 - -8.43 - -0.26 - -10.78 - 2.65 -2.36 - -8.43 - - -7.97 -8.64 - -3.54 0.84 2.05 2.09 1.25 2.38 2.11 2.64 1.13 2.13 3.08 -8.79 - -10.41 - - - - -12.53 -7.85 - - -8.23 -
- - - - - - - -1.65 - - - - -1.26 -2.33 - - - - - - - 2.02 - - - - - - - - - - -2.36 - 1.36 1.56 1.21 3.06 - 3.4 - 1.9 3.03 3.34 1.35 - - - 0.55 - - - -5.49 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -0.62 -1.23 - - - - -7.41 -3.79 - 0.67 0.83 2.45 2.11 2.38 2.7 2.86 2.6 2.45 3.42 0.95 - - - -0.74 - - - -5.36 - - - - -
-0.34 -0.57 -1.84 -4.64 -7.23 - - -9.31 - - -10.38 -10.24 -4.3 -2.94 -2.27 -2.24 -3.44 -3.73 -3.4 -2.23 -6.52 -1.89 -6.1 -5.73 -5.19 0.94 1.24 -5.55 -4.48 -5.28 -5.55 -5.26 -4.01 -1.62 -1.64 0.26 2.36 2.58 2.14 2.5 2.78 2.42 2.19 2.51 1.99 -2.07 -4.52 -2.88 -4.84 -3.47 -5.14 -4.92 -3.32 -3.28 -7.71 -7.8 -8.01 -4.36
- - - -0.52 - - - - -8.58 - - - -3.38 -5.95 -5.46 - - - - - - - - - - - - - - - - - - -3.04 -1.08 -3.73 3.17 2.44 2.37 2.64 1.41 2.13 3.87 3.15 -4.0 - - - -4.59 - - - -10.4 - - - - -
- - -4.73 - - - - - -8.15 - - - -5.98 -6.19 - -5.66 - - - - - -4.02 - - - -4.38 -6.32 - - - - - - -1.61 - -3.16 2.51 3.45 1.84 3.03 2.91 2.82 2.26 2.8 0.92 - - -3.89 -4.58 - - - -1.92 - - -4.99 - -1.19
1.25 0.22 0.23 0.52 -4.95 - - - -8.29 - -7.17 - -1.12 -4.4 - -6.48 0.54 -0.94 -4.17 - -2.5 - -4.24 -2.7 -2.94 -0.7 -4.58 -2.01 -1.59 -3.15 -0.8 -1.85 -0.43 -1.15 1.42 0.98 2.6 2.12 2.01 2.0 1.57 1.86 2.29 2.45 1.08 -3.7 -5.51 -2.24 -2.12 -1.54 0.33 -1.05 -1.17 -3.01 -5.14 - - -
- - - - -4.85 - - - - - - - -6.68 - - - - -6.3 -4.3 - -4.96 -0.66 - -6.95 -4.32 0.13 -3.67 - -2.33 - - -4.88 -4.94 - -3.63 2.09 2.58 2.64 1.92 2.65 2.27 2.35 2.82 2.26 2.85 - - -5.58 -3.53 - - - -10.74 - - - - -
- - - 1.34 -0.27 -0.05 - - -3.63 - - - -1.83 - - - - - - - - 0.13 - - - -0.23 -1.81 - - - - - - - - 3.23 2.23 -0.21 - 2.55 - 2.84 0.73 - 3.23 - - - - -0.21 3.06 - -6.23 - -0.75 - 0.12 0.18
-5.17 - -4.32 -4.48 -5.55 - - - - - - - -5.45 -4.81 -3.77 -2.23 -4.31 -4.21 - -5.22 -2.05 -1.87 -2.22 -1.05 -1.01 -1.01 -3.64 -2.66 -2.45 -2.65 -2.83 -2.04 -1.91 -3.66 0.03 1.32 2.61 2.45 2.32 2.93 2.03 2.58 2.77 2.3 1.98 -5.72 -5.44 - -5.62 -4.7 -3.23 -5.06 -5.49 -3.13 -5.95 - - -
-2.76 - -1.97 0.95 0.19 - -0.51 - - - - - 0.55 -0.83 -0.06 0.62 - -1.84 -1.37 -2.84 -1.33 - - -4.06 -2.08 -1.92 - - -1.54 - -4.53 -0.85 1.28 - 1.77 - 2.37 1.46 1.44 2.93 2.17 2.14 2.06 2.47 - - - - 0.05 - -3.74 0.43 0.49 - - - - -
-1.63 -1.74 -2.86 -3.89 -7.83 -5.6 -8.14 -5.75 -6.31 -6.54 -6.18 -6.26 -3.33 -3.19 -4.08 -4.17 -2.31 -3.49 -2.29 -2.34 -2.97 -2.87 -2.79 -2.79 -2.38 0.51 -1.29 -3.24 -2.76 -3.13 -3.19 -3.25 -3.01 -4.04 -3.94 -2.64 2.65 2.91 2.46 2.84 2.91 2.47 1.9 2.26 1.81 -4.79 -5.19 -3.41 -3.7 -3.74 -3.03 -3.93 -4.4 -4.45 -4.23 -3.69 -3.91 -2.57
-1.06 -0.38 -1.08 -1.38 - - - - - - - - -0.27 -1.24 -0.69 -0.75 -2.06 -0.75 -1.21 -1.87 -2.94 0.52 -2.46 -2.89 -4.15 -0.68 -2.44 -3.62 -3.74 -3.28 -1.27 -1.2 -1.16 0.25 0.5 0.62 1.35 2.2 1.38 1.93 2.07 1.92 1.62 1.15 2.3 -1.55 -3.66 -0.94 -1.59 -1.04 -0.8 -1.92 -0.72 -2.55 -0.14 -0.24 -2.63 2.67
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.