Heatmap: Cluster_85 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
0.34 -1.47 1.94 -2.01 - - -1.69 - - - - - 2.1 0.78 0.78 1.05 0.58 2.67 0.61 1.28 0.94 - -1.05 -0.49 -0.1 -1.13 -1.89 -0.88 -0.13 -2.4 -0.29 -0.53 -1.53 0.77 -0.09 - - - - - - -5.54 - - - 1.32 0.84 -0.48 - -1.35 1.74 0.98 1.87 0.47 - - - 1.89
3.89 2.39 2.2 - - - 0.35 - - - - - - -2.15 - -1.85 - - 2.42 3.32 - - - - - - - - - - - -2.96 -2.32 - - - - - - - - - - 2.18 - - -0.51 -0.07 -1.4 - - 0.2 2.66 0.26 - - -0.54 -
- -2.69 - -2.3 -2.33 - - - - - - - - - - - -3.18 - - - -2.92 - - - - -0.42 -2.95 -2.16 -2.2 -2.63 - -3.81 -1.22 - 1.7 -1.13 2.77 2.12 3.34 2.73 0.76 1.65 3.47 2.38 -1.4 -1.77 - -4.04 -0.65 - - - -0.1 -3.23 - - - -
- - -1.51 -1.32 - - - - - - - - -2.24 - -3.12 - - -1.68 - - - 0.55 - -4.29 -1.84 -2.83 - - -0.9 - -3.34 - -4.33 - - - - - - - - -3.74 - - - -2.0 4.86 1.03 -2.66 - - 0.15 2.91 3.56 0.88 -2.17 - -
- - -0.64 -0.59 - - - - - - - - - -0.26 0.03 0.24 1.17 1.1 - - - -1.53 - - - - - -1.04 - - - - - - - - - - - - - - - - - 0.13 4.63 0.29 -1.36 - - 0.29 2.79 3.12 - - - 2.01
- - - 4.4 - - - - - - - - 1.29 -0.81 1.61 - 0.5 2.85 - - - 2.56 - - - - 0.59 - - - - - - - - - - - - - - 0.22 - - - - 2.29 - - - 0.35 0.9 0.46 2.09 - - - -
-2.77 -0.71 -1.74 -3.66 -5.55 - - - - - - - -4.83 -1.88 -1.98 -2.04 -2.37 -0.97 -4.98 -3.89 -3.0 2.3 - -4.55 -4.1 -0.09 -0.39 - -4.24 -6.29 -7.21 -3.68 -1.86 -3.66 -2.96 -2.91 0.56 0.65 -0.14 1.05 0.44 0.95 -0.85 0.27 1.11 -1.98 4.16 1.85 -7.22 - -4.82 -1.78 0.72 2.98 -3.2 -6.04 -6.14 1.41
- - - 3.46 2.7 - - - - - - - - - - - - - - - - - - - -0.29 - - - - - - - -0.79 - - - - - 3.78 - 3.78 0.44 - - - - - - 3.08 - - - 0.92 - - - - -
-1.66 0.19 0.82 -0.53 -3.64 - -2.47 -9.67 -8.45 - - - 0.08 -1.14 -0.79 -0.43 0.56 0.64 1.48 1.33 -0.36 0.18 0.41 0.23 -0.88 -0.09 0.92 -0.18 -1.55 -0.72 -0.32 -1.02 -0.76 -1.08 -0.33 -1.01 -2.36 -1.11 -2.88 -1.53 -1.56 -1.9 -2.04 -1.26 -2.32 3.07 -2.04 1.73 -0.86 0.5 -0.31 0.1 0.73 1.4 1.62 0.27 -0.41 0.7
-3.03 -2.67 -0.58 0.24 -2.31 - - - -3.64 -3.47 -4.74 - -2.36 -3.86 -0.83 -0.94 2.05 0.34 - 1.33 -1.76 -0.91 -3.39 -2.15 -0.43 0.17 -1.89 -0.46 -2.95 - -3.49 -1.57 -0.9 - 2.26 3.22 1.27 -0.21 -0.23 0.3 - 0.85 1.43 - -0.28 -0.3 -4.49 -2.64 -1.46 2.19 1.54 -0.84 2.4 - - - - 0.68
- 0.43 -1.42 0.38 -3.52 - -2.31 -4.9 -6.89 - - - -4.15 -1.76 -0.85 -1.9 1.15 0.29 -2.98 -2.97 -0.92 -2.22 -1.72 -1.47 -1.01 -0.0 -0.9 -0.65 -2.17 -0.81 -2.09 -0.91 -0.19 -1.1 1.33 3.21 1.33 0.06 1.72 0.9 -0.9 0.57 2.51 0.48 1.29 -1.99 -3.41 -3.95 -1.65 2.0 1.54 -0.33 1.07 - -3.71 - -2.85 -
- - 1.36 - - - - - -6.0 - - - -2.68 -0.89 -1.22 -1.46 -0.12 1.89 - - -3.38 0.07 -3.63 -2.72 - -2.07 - -4.08 - -2.97 - -4.67 - - - - - - - - - -5.92 - - - 3.3 3.4 2.17 -3.46 - - -1.03 2.73 1.71 - - - 3.59
-1.59 - -2.52 -0.43 1.85 -0.37 1.35 -1.19 -3.48 0.07 -1.19 -0.5 - -3.58 -0.2 -0.11 -0.28 -0.45 - - 1.55 -1.04 0.44 0.91 1.57 0.67 0.72 0.43 1.86 2.18 0.37 1.02 1.23 - 0.62 - -0.47 0.86 - -1.08 0.57 -0.67 0.68 - - - -3.63 -1.2 0.46 -3.04 0.97 -2.03 0.48 -2.42 -0.76 - -2.05 -0.4
- - - 2.78 4.8 - 0.94 -4.39 -1.75 - - - 0.96 -2.12 - - - 0.11 0.38 - - - -1.32 -1.58 -2.83 -1.42 - - - -0.77 - -1.39 -2.69 - 0.8 - - - - - - - - - - - 0.97 -0.53 2.03 - -0.54 -0.17 1.82 -1.19 - - - -
-0.96 -1.8 -2.44 0.97 - - -1.14 -3.01 - - - - -2.83 -0.91 -2.82 - 1.58 2.14 - -2.17 -0.4 - -0.91 -1.13 -0.93 - -2.26 1.1 -0.17 -0.72 0.69 0.83 -0.85 - 1.52 - - 0.23 0.65 0.14 - - - - - 3.36 -3.7 - 1.38 -2.05 -2.21 2.19 3.4 -1.07 - - -2.03 -
- -0.67 - 3.8 2.76 - 1.34 - -1.04 - -3.47 - 1.27 1.82 -0.58 1.47 -0.99 0.14 - - -0.13 - 0.62 -0.92 -0.59 -1.02 - -1.08 - - - -1.48 -2.08 - 1.85 - - - - 0.48 - -1.32 - - - 1.19 -2.2 1.07 -0.17 - -0.6 0.63 1.26 0.01 -0.2 - - -
0.81 - -1.52 0.9 - - - - - - - - -1.15 2.94 0.94 0.35 1.7 0.56 - - - 1.23 - -2.46 - - - - - - - -2.99 - - - - - - - - - -2.52 - - - 0.53 - - 0.14 - - - 2.62 0.38 4.62 -0.68 - -
-0.88 - -0.98 -2.21 -1.16 - - - - - - - 1.47 0.32 -2.89 -3.75 0.68 0.43 - -0.31 1.97 -0.09 1.25 2.68 2.39 -2.18 -2.06 0.31 1.11 0.73 -2.69 1.45 0.79 - 1.04 -0.94 - - - -0.8 - -3.33 - - -0.12 -0.28 -2.51 0.71 1.75 -0.45 1.21 1.12 1.24 0.25 -1.64 - - -
-1.08 -1.45 -0.06 -2.86 -2.88 - - -6.87 - - - - 1.21 -0.49 -2.5 -5.47 -0.0 0.35 -2.1 -1.28 1.31 0.95 0.92 2.35 2.69 0.44 -1.0 0.01 0.14 -0.42 -0.67 0.88 1.16 - 0.97 -0.34 -0.35 -2.86 -0.88 - - -3.13 - - - -0.41 -2.33 1.58 1.23 0.18 0.31 -0.29 1.33 2.06 -3.36 - - 0.95
-1.26 -4.18 -0.52 -2.87 -3.23 - - -9.19 - - - - 0.51 -0.43 -2.28 -2.53 0.48 -0.38 -0.27 -1.31 1.34 0.44 1.19 2.36 2.72 1.19 -0.31 0.17 0.42 0.07 -1.32 0.83 1.08 -0.81 0.46 -0.49 - -3.67 - -3.13 - -2.76 - - -0.33 -1.15 -1.4 1.68 0.2 0.24 0.83 -0.26 0.71 1.84 -1.08 - - 1.76
-0.13 0.39 -0.05 -1.0 -2.48 -4.18 - -4.69 -3.7 -5.18 -4.05 -4.8 0.49 -0.28 -1.51 -1.93 0.43 0.78 -0.35 0.13 -1.24 -1.25 -1.22 -1.17 -0.8 -2.01 -1.84 -2.41 -1.21 -2.11 -2.1 -1.68 -1.17 -2.9 -3.08 -3.48 -3.71 -2.61 - -3.11 -1.5 -3.22 -1.94 - - 1.39 0.32 -0.82 4.76 -3.68 -2.61 0.83 2.4 -0.26 -3.89 - -2.5 -
-1.12 -1.95 -0.48 1.24 -2.37 - -0.57 -5.5 - - -4.28 - 2.79 -1.25 -1.4 -3.94 2.64 -0.27 -0.73 -2.2 -1.41 - -0.41 -2.43 -2.06 - -3.41 - - -0.12 - -1.5 -3.46 1.97 - - - 0.05 - - - -2.14 - - -0.35 - - -1.34 0.25 0.6 4.44 -0.57 1.01 -1.15 -0.45 - - -
-1.45 -3.56 0.52 -0.49 -5.57 - -5.28 - - - - - -0.96 -0.28 -2.06 -3.06 -0.42 -0.36 0.61 0.38 0.12 -0.37 -0.45 -0.06 0.29 0.09 -0.09 0.04 1.35 0.29 -1.85 -0.91 -0.59 -2.1 -1.05 -0.46 -3.56 -2.61 -1.9 -5.13 -1.9 -2.66 -3.42 - -2.54 0.42 1.33 2.36 1.46 -1.07 1.46 -0.06 0.62 1.77 0.94 -2.04 -2.09 3.37
0.75 0.67 1.45 1.6 -0.3 -1.4 0.12 -3.03 -2.47 -2.52 -22.13 - 0.15 0.02 - -2.61 0.02 -0.56 2.66 1.53 -4.6 -1.91 - -2.48 -1.8 0.01 - - - -0.55 - -0.58 -0.85 -3.31 - - - - - - - -2.01 1.1 - - 0.94 -0.85 0.99 1.4 3.55 - - 1.68 -1.98 - 2.19 -5.21 -
-4.12 -4.82 2.26 -4.88 -8.66 - -8.21 -8.53 -9.73 - -10.16 -9.44 -2.7 0.11 -0.0 0.11 0.04 0.68 0.71 -1.4 -2.95 -4.19 -2.15 -2.69 -3.45 -2.69 -1.68 -2.96 -2.29 -2.56 -1.49 -0.39 -0.65 0.59 -3.38 -5.95 -6.05 -5.48 - -5.87 -3.77 -4.83 - - -5.05 -0.15 1.09 2.62 -6.57 -2.97 -1.71 0.69 1.23 2.34 -1.21 -4.06 -8.22 4.38
-3.28 -2.88 1.49 1.37 1.82 -3.55 1.17 -2.38 -2.43 -2.69 -2.68 -3.14 1.33 0.26 0.38 0.5 -0.89 -0.1 -2.75 -5.05 -0.87 -0.44 -1.1 -0.75 -1.16 0.62 0.54 -0.52 -0.55 -0.76 -1.13 -0.52 -0.27 - -0.28 -3.1 0.4 0.23 0.09 0.24 -0.23 0.04 1.32 -1.19 0.41 0.53 -3.45 0.19 1.25 0.53 0.83 -0.0 0.65 0.59 -0.58 0.02 0.63 -1.12
-3.21 -6.06 0.95 -5.39 -5.48 - - - - - - - -3.14 0.63 0.46 0.39 0.34 2.03 1.08 0.22 -0.1 2.56 -2.36 -1.07 -1.23 1.82 1.03 -0.25 0.01 -0.17 -1.17 -1.09 -1.7 1.31 -0.7 -2.83 -1.87 -3.07 - - - -3.54 -4.26 - -1.83 0.23 2.36 0.77 -7.15 - -4.75 0.05 2.22 2.77 - - - -0.22
-1.47 0.21 -0.67 -1.98 -3.69 -4.54 -4.57 -4.09 -5.07 -7.45 -7.12 -6.01 -0.97 -0.36 -1.02 -1.19 0.06 -0.53 -0.22 -0.86 0.09 0.47 -0.12 0.02 0.7 0.4 -0.74 0.09 1.16 0.34 0.27 0.35 0.45 0.46 0.43 -0.79 -0.85 -0.87 -0.75 -0.82 -0.92 -0.93 -0.59 -0.31 -0.61 -0.83 -0.65 2.73 0.08 -2.24 -1.35 -0.83 0.92 2.35 1.17 0.66 -1.18 1.84
-1.06 -2.04 -0.21 -2.32 - - - - -8.59 - - - 0.34 -1.79 -1.73 -0.93 -2.94 0.46 -2.72 -1.16 - -1.49 -4.31 -7.1 -5.62 -4.0 -2.99 - -4.98 -4.7 -6.64 -6.08 -7.11 - -4.28 -2.09 -0.8 -0.24 0.57 0.26 0.27 0.24 -0.9 -2.86 -1.22 -0.41 -1.51 2.47 -0.83 -5.01 -4.06 1.43 1.75 3.55 1.33 -0.16 -1.46 3.83
-0.44 -0.71 -0.78 2.34 -2.4 -0.88 -1.66 -1.34 -1.26 -0.7 -0.6 -0.55 -2.76 -1.66 -1.49 -2.39 -0.6 -0.77 -0.12 -0.63 -0.07 -1.29 -0.25 -0.07 0.17 0.93 -1.21 -0.0 0.54 -0.02 -0.37 -0.58 -1.01 -3.91 -1.51 -4.56 -3.37 -3.47 -3.71 -3.01 -5.3 -3.6 -4.23 -3.68 -4.87 -0.51 0.41 2.38 0.08 -0.96 -0.31 1.46 0.42 1.39 1.78 1.16 2.51 1.36
- - - 1.33 - - - 2.08 0.64 -0.02 -0.14 -0.62 -0.42 1.23 0.88 1.58 -0.12 1.99 - - 1.7 - - -0.47 1.63 - 1.54 -0.68 -0.4 1.38 - -1.33 -3.41 - - - - - - - - -0.95 - - - 2.67 - - 1.88 - 0.1 - 3.04 - - - - -
1.64 0.1 0.73 -1.46 -1.5 - -3.12 - - - - - -0.13 -2.06 -1.94 -3.09 -0.66 -1.05 -0.19 -0.87 -1.53 -0.45 -1.17 -0.32 -0.79 -0.56 -0.8 -0.02 -1.44 -0.23 -1.04 -1.01 -1.33 - 0.1 0.72 1.49 1.39 1.86 2.04 -0.46 0.96 2.06 1.16 1.1 -1.01 - 0.85 1.06 1.99 0.38 -1.14 -0.09 -1.37 -0.45 - -2.25 -
-3.1 -4.19 0.13 -3.96 -6.35 - -8.01 - - - - - -0.68 -0.56 -0.92 -1.12 0.7 0.31 -0.37 0.18 0.05 -0.77 -0.52 -0.3 -0.49 -0.62 -0.93 0.44 0.65 0.46 -0.39 -0.46 -0.83 -1.38 -0.83 -2.58 -4.81 -4.48 -4.35 -4.03 -2.54 -3.36 -3.97 -2.99 -2.2 1.21 0.47 2.63 -6.44 -1.3 -1.17 0.68 0.98 1.81 2.84 0.35 -1.0 3.24
-4.08 - -0.57 -0.66 -2.23 -0.7 -0.67 0.65 -0.32 -1.08 -1.33 -0.55 -2.0 -2.12 -1.65 -1.24 0.79 1.39 -1.34 -4.31 -1.55 -1.26 -4.31 -3.18 -2.51 -3.92 -6.42 -1.85 -2.74 -1.19 -3.44 -2.91 -3.13 -2.72 - -3.39 - -4.63 - - - -3.9 - - -2.57 -1.29 1.5 3.04 -1.91 -4.5 -4.66 -1.31 1.81 2.7 - -4.77 - 4.33
-2.49 -3.77 0.4 -2.86 -6.11 - - -9.02 -8.42 -9.86 - - 1.42 -1.64 -1.05 -0.48 -1.88 0.86 -1.05 -1.73 -2.02 2.25 -2.55 -2.47 -2.82 -3.99 -0.6 -1.86 -2.59 -2.25 -4.67 -2.8 -2.12 -2.46 -1.3 -1.57 0.5 0.55 0.46 1.14 0.14 0.49 1.02 0.59 -1.38 1.68 0.66 1.76 1.17 -3.31 0.94 -0.32 -0.24 1.49 1.69 1.07 -1.22 2.44
- - - -4.06 -2.07 - - - - - - - - - - - -4.0 -0.86 - - - 0.58 - -6.03 - - -2.38 - - - - -5.94 - - - - - - - - - - - - - 3.1 2.93 3.17 -3.82 - -3.66 0.03 0.4 4.17 -2.56 - - 3.25
- - -0.4 - - - - - - - - - - - - - - -2.14 - - -1.34 1.16 - - - - - - 0.49 - - - - - - - - - - - - -1.19 - - - 2.29 - 2.64 4.94 - - - 1.05 2.43 1.42 - -1.02 -
- - -0.43 1.07 -0.34 - -1.67 -5.15 -2.61 -5.4 -3.35 -3.46 2.61 -2.77 -3.35 -2.28 0.27 0.94 - -3.7 0.15 - 1.27 0.81 0.16 -2.46 -0.39 -2.48 0.15 -1.9 -0.12 -0.14 0.42 - -0.31 - -1.92 - - -1.38 -0.88 -1.51 -1.88 - -0.31 1.64 -2.28 1.01 3.32 -0.6 0.69 2.18 1.71 -0.87 -0.76 -0.64 0.02 -2.27
2.83 0.85 1.03 0.66 - - - -4.9 -4.25 - - - 1.81 -1.68 -1.16 -3.43 -0.89 0.57 0.88 - 0.07 - -0.73 -1.02 -0.67 -0.82 -1.61 0.26 1.08 - 1.77 -1.26 0.53 0.9 -0.28 - - -0.12 - - - -1.74 - 2.14 - -1.08 0.32 0.96 0.95 -2.51 -2.05 1.45 2.08 -0.69 - - -1.51 1.4
-0.41 1.0 0.33 0.49 - -4.39 -3.69 -4.2 -1.39 - - - 0.04 -2.31 -1.27 -0.53 -2.58 -2.89 -0.52 -0.98 -1.52 -0.57 -2.15 -1.47 -0.42 -0.77 -1.37 -1.17 -0.57 -0.94 -1.82 -1.13 -1.17 2.91 1.67 -0.03 0.38 -0.15 0.43 1.72 -0.31 0.8 0.4 1.14 0.52 -4.31 -1.65 -0.29 0.04 - -1.89 -2.49 -0.4 1.02 -2.43 -4.48 -1.98 3.33
- - -0.66 -1.28 - - - - -2.66 - - - -1.85 - -0.78 -1.02 - -0.75 - -0.08 - - - -1.36 -1.05 0.16 -2.2 -1.88 -0.25 0.19 - -3.07 -1.59 - 0.76 - - 1.34 - - - -2.18 0.7 - - 2.27 4.65 0.55 -2.05 - - 1.22 1.99 1.94 -0.78 - - -0.85
2.06 -1.43 -2.57 1.7 - - - - -4.5 - - - 1.88 0.8 -0.51 -0.53 0.66 0.08 -0.28 0.09 -0.08 1.8 -0.24 0.5 0.24 -1.68 -2.3 0.75 - 0.21 -1.23 -0.23 -0.12 - 0.86 - - - 1.24 - - -4.03 - 1.28 - - -2.96 -0.53 0.12 0.23 3.22 -1.36 1.68 -0.17 - 0.75 - -
- - 0.19 - 0.51 - 2.99 - 0.48 - - - 0.03 -1.7 - - - 0.99 - 2.11 0.5 - - -0.42 -1.66 - - -0.13 - 0.23 - -0.33 - - - - - 1.65 - - - - - - - 0.55 - - -0.16 - - - 3.24 3.94 - - 1.49 -
-0.31 -0.98 1.72 -1.17 -3.28 - -2.46 -10.04 -10.2 - -10.8 - 2.66 -1.86 -3.02 -2.82 0.17 0.39 0.97 1.56 0.34 -0.37 0.46 0.14 -0.2 -1.95 -1.2 0.34 -0.49 -0.21 -2.44 -1.39 -0.91 -4.02 -2.43 -3.18 -1.02 -1.09 -2.01 -0.96 -1.27 -1.47 -1.89 -1.61 -1.2 0.74 -0.24 1.59 3.91 -4.2 -5.21 -1.88 0.84 0.24 -4.24 -5.81 -4.76 -0.95
1.92 0.73 0.95 -3.56 -4.2 - - -8.66 -10.24 - -10.18 - -0.5 -0.03 0.7 0.62 -0.27 1.46 1.54 2.62 -4.72 -0.01 -5.92 -4.68 -3.62 -1.86 -0.83 -4.49 -3.13 -4.9 -6.23 -5.74 -4.99 -3.93 -5.11 -6.72 -2.21 -1.12 -2.14 -1.55 -3.15 -1.55 -0.78 -0.23 -1.98 2.15 1.35 1.51 1.73 -8.34 -6.57 -0.4 0.6 0.71 2.23 -0.21 -3.4 2.17
-0.55 0.25 1.42 1.0 -0.54 - -2.16 -8.02 -8.28 -10.08 -10.12 -9.99 2.08 0.37 -0.02 -0.07 -0.36 0.12 -0.03 -0.47 -0.56 -0.02 0.38 0.29 -0.26 -0.96 0.44 -0.2 -0.61 -0.44 0.5 0.26 -0.14 -3.11 -2.12 -3.47 -0.65 -0.95 -1.71 -1.93 -2.26 -1.7 -0.95 -1.43 -1.74 -0.77 0.02 2.65 0.72 -3.81 -1.07 0.1 0.77 0.79 1.24 1.09 0.88 1.04
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.