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Heatmap: Cluster_200 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00127350 (evm_27.TU.AmTr_v1.0_scaffold00002.84)
 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00004p00244560 (evm_27.TU.AmTr_v1.0_scaffold00004.238)
 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00005p00110340 (evm_27.TU.AmTr_v1.0_scaffold00005.29)
 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.05 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00009p00129100 (evm_27.TU.AmTr_v1.0_scaffold00009.73)
 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.09 0.11 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00012p00055520 (evm_27.TU.AmTr_v1.0_scaffold00012.16)
 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00012p00156030 (evm_27.TU.AmTr_v1.0_scaffold00012.93)
 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.06 0.04 0.0 0.0 0.0 0.02 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00012p00214500 (evm_27.TU.AmTr_v1.0_scaffold00012.155)
 0.0 0.0 0.0 0.0 0.1 0.0 0.51 0.0 0.11 0.19 0.0 0.0 0.0 0.04 0.15 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00014p00175360 (evm_27.TU.AmTr_v1.0_scaffold00014.60)
 0.0 0.0 0.0 0.0 0.05 0.0 0.05 0.0 0.02 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00019p00190310 (evm_27.TU.AmTr_v1.0_scaffold00019.210)
 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.16 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00022p00165560 (evm_27.TU.AmTr_v1.0_scaffold00022.171)
 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.61 0.09 0.0 0.0 0.06 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.02
AMTR_s00025p00043160 (evm_27.TU.AmTr_v1.0_scaffold00025.22)
 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00027p00232720 (evm_27.TU.AmTr_v1.0_scaffold00027.116)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.16 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00028p00104720 (evm_27.TU.AmTr_v1.0_scaffold00028.31)
 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.09 0.04 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00032p00217210 (evm_27.TU.AmTr_v1.0_scaffold00032.214)
 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.03 0.0 0.0
AMTR_s00034p00029380 (evm_27.TU.AmTr_v1.0_scaffold00034.3)
 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00036p00108740 (evm_27.TU.AmTr_v1.0_scaffold00036.43)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00039p00051030 (evm_27.TU.AmTr_v1.0_scaffold00039.19)
 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00041p00205370 (evm_27.TU.AmTr_v1.0_scaffold00041.189)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00041p00209190 (evm_27.TU.AmTr_v1.0_scaffold00041.208)
 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.32 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00041p00210420 (evm_27.TU.AmTr_v1.0_scaffold00041.212)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00041p00216450 (evm_27.TU.AmTr_v1.0_scaffold00041.231)
 0.0 0.0 0.0 0.1 0.08 0.0 0.03 0.0 0.64 0.72 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.37
AMTR_s00041p00217310 (evm_27.TU.AmTr_v1.0_scaffold00041.241)
 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.02 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00042p00220270 (evm_27.TU.AmTr_v1.0_scaffold00042.69)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.11 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00050p00041270 (evm_27.TU.AmTr_v1.0_scaffold00050.10)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00051p00169130 (evm_27.TU.AmTr_v1.0_scaffold00051.64)
 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00054p00182500 (evm_27.TU.AmTr_v1.0_scaffold00054.68)
 0.0 0.0 0.0 0.0 1.83 0.0 0.67 0.0 2.55 3.17 0.0 0.0 0.36 0.81 0.64 0.0 0.22 0.77 0.0 0.0 0.0 0.06
AMTR_s00055p00124440 (evm_27.TU.AmTr_v1.0_scaffold00055.52)
 0.0 0.0 0.0 0.0 0.02 0.0 0.02 0.0 0.24 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00057p00166390 (evm_27.TU.AmTr_v1.0_scaffold00057.169)
 0.0 0.0 0.0 0.0 0.01 0.0 0.01 0.0 0.02 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00061p00139570 (evm_27.TU.AmTr_v1.0_scaffold00061.119)
 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00062p00174230 (evm_27.TU.AmTr_v1.0_scaffold00062.168)
 0.0 0.0 0.0 0.0 0.03 0.0 0.35 0.0 0.35 0.13 0.09 0.0 0.09 0.1 0.15 0.0 0.0 0.3 0.0 0.06 0.27 0.03
AMTR_s00065p00168320 (evm_27.TU.AmTr_v1.0_scaffold00065.133)
 0.0 0.0 0.0 0.0 1.25 0.0 1.06 0.0 2.24 2.45 0.0 0.69 1.03 0.53 1.37 0.0 0.65 0.6 0.27 0.25 0.0 0.7
AMTR_s00067p00138260 (evm_27.TU.AmTr_v1.0_scaffold00067.124)
 0.0 0.0 0.0 0.0 0.33 0.0 0.0 0.0 0.2 0.02 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00068p00113810 (evm_27.TU.AmTr_v1.0_scaffold00068.67)
 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.13 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00076p00152920 (evm_27.TU.AmTr_v1.0_scaffold00076.50)
 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00078p00118230 (evm_27.TU.AmTr_v1.0_scaffold00078.92)
 0.0 0.0 0.0 0.0 0.09 0.0 0.25 0.0 0.17 0.05 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05
AMTR_s00081p00135650 (evm_27.TU.AmTr_v1.0_scaffold00081.51)
 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00083p00019540 (evm_27.TU.AmTr_v1.0_scaffold00083.4)
 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00083p00105420 (evm_27.TU.AmTr_v1.0_scaffold00083.29)
 0.0 0.0 0.0 0.0 0.0 0.0 0.12 0.0 0.28 0.06 0.0 0.0 0.05 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00084p00179860 (evm_27.TU.AmTr_v1.0_scaffold00084.50)
 0.0 0.0 0.0 0.0 0.1 0.0 0.23 0.0 0.25 0.24 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00086p00105150 (evm_27.TU.AmTr_v1.0_scaffold00086.54)
 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.07 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00088p00135400 (evm_27.TU.AmTr_v1.0_scaffold00088.102)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.04 0.5 0.0 0.0 0.12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00117p00111640 (evm_27.TU.AmTr_v1.0_scaffold00117.46)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00118p00065230 (evm_27.TU.AmTr_v1.0_scaffold00118.10)
 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00122p00116060 (evm_27.TU.AmTr_v1.0_scaffold00122.52)
 0.0 0.0 0.0 0.21 0.09 0.0 0.5 0.0 0.33 0.21 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00138p00066010 (evm_27.TU.AmTr_v1.0_scaffold00138.36)
 0.0 0.0 0.0 0.0 0.0 0.0 0.07 0.0 0.24 0.03 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00149p00098020 (evm_27.TU.AmTr_v1.0_scaffold00149.81)
 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.05 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00169p00047080 (evm_27.TU.AmTr_v1.0_scaffold00169.28)
 0.0 0.0 0.0 0.0 0.16 0.0 0.0 0.0 0.06 0.05 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00178p00026980 (evm_27.TU.AmTr_v1.0_scaffold00178.2)
 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00213p00012540 (evm_27.TU.AmTr_v1.0_scaffold00213.1)
 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00238p00014570 (evm_27.TU.AmTr_v1.0_scaffold00238.2)
 0.0 0.0 0.0 0.0 2.39 0.0 0.12 0.0 4.37 5.0 0.34 0.0 0.22 0.21 0.0 0.0 0.28 0.0 0.5 0.08 3.53 0.0
AMTR_s00240p00014450 (evm_27.TU.AmTr_v1.0_scaffold00240.1)
 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00374p00013480 (evm_27.TU.AmTr_v1.0_scaffold00374.4)
 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.06 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s01152p00009680 (evm_27.TU.AmTr_v1.0_scaffold01152.1)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15 0.15 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)