Heatmap: Cluster_247 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

Gene	Egg apparatus cell (small)	Egg apparatus cell (medium)	Egg apparatus cell (large)	Ovary	Uninuclear microspore	Generative cell	Pollen	Sperm	Pollen tube (bicellular)	Pollen tube (tricellular)	Flower (bud, female)	Flower (bud, male)	Flower (female)	Flower (male)	Flower (tepals)	Fruit (female)	Apical meristem	Shoot (female)	Shoot (male)	Leaf (male)	Leaves	Root (male)
AMTR_s00002p00271460 (evm_27.TU.AmTr_v1.0_scaffold00002.626)	0.08	0.45	0.58	0.13	0.47	0.01	0.09	0.05	0.07	0.06	1.0	0.48	0.37	0.27	0.21	0.22	0.56	0.4	0.28	0.22	0.12	0.23
AMTR_s00004p00111480 (evm_27.TU.AmTr_v1.0_scaffold00004.91)	0.64	0.37	0.17	0.11	0.19	0.0	0.06	0.04	0.1	0.09	0.75	1.0	0.4	0.31	0.41	0.48	0.61	0.47	0.44	0.4	0.49	0.37
AMTR_s00006p00246940 (evm_27.TU.AmTr_v1.0_scaffold00006.134)	0.25	0.62	0.6	0.35	0.43	0.02	0.12	0.12	0.19	0.2	0.95	0.69	0.56	0.51	0.41	0.69	1.0	0.8	0.56	0.68	0.62	0.42
AMTR_s00006p00260790 (evm_27.TU.AmTr_v1.0_scaffold00006.224)	0.02	0.18	0.0	0.03	0.14	0.0	0.09	0.07	0.12	0.1	1.0	0.55	0.44	0.28	0.4	0.83	0.86	0.32	0.49	0.5	0.18	0.69
AMTR_s00009p00248470 (evm_27.TU.AmTr_v1.0_scaffold00009.246)	0.48	0.46	0.63	0.07	0.49	0.0	0.01	0.0	0.02	0.02	1.0	0.66	0.26	0.22	0.23	0.42	0.96	0.43	0.43	0.15	0.08	0.37
AMTR_s00010p00236050 (evm_27.TU.AmTr_v1.0_scaffold00010.282)	0.58	0.05	0.86	0.03	0.28	0.09	0.06	0.01	0.07	0.08	0.81	0.44	0.39	0.23	0.3	0.82	1.0	0.37	0.49	0.64	0.42	0.43
AMTR_s00011p00260650 (evm_27.TU.AmTr_v1.0_scaffold00011.193)	0.27	0.19	0.25	0.06	0.11	0.11	0.01	0.0	0.01	0.02	0.86	0.7	0.58	0.5	0.32	0.61	1.0	0.63	0.39	0.29	0.37	0.7
AMTR_s00012p00264440 (evm_27.TU.AmTr_v1.0_scaffold00012.361)	0.18	0.22	0.33	0.26	0.22	0.0	0.13	0.02	0.11	0.11	1.0	0.63	0.28	0.22	0.13	0.9	0.84	0.59	0.71	0.31	0.25	0.38
AMTR_s00019p00250150 (evm_27.TU.AmTr_v1.0_scaffold00019.406)	0.82	0.23	0.34	0.0	0.43	0.07	0.12	0.07	0.11	0.1	1.0	0.68	0.31	0.22	0.16	0.33	0.35	0.66	0.66	0.19	0.3	0.32
AMTR_s00021p00112470 (evm_27.TU.AmTr_v1.0_scaffold00021.60)	0.66	0.84	0.98	0.34	0.37	0.01	0.03	0.03	0.05	0.04	1.0	0.64	0.5	0.29	0.37	0.68	0.52	0.66	0.52	0.42	0.47	0.47
AMTR_s00021p00112970 (evm_27.TU.AmTr_v1.0_scaffold00021.61)	0.49	0.45	0.5	0.28	0.38	0.01	0.03	0.15	0.04	0.04	1.0	0.54	0.5	0.23	0.38	0.42	0.53	0.56	0.49	0.37	0.29	0.4
AMTR_s00021p00238820 (evm_27.TU.AmTr_v1.0_scaffold00021.247)	0.33	0.22	0.3	0.32	0.17	0.0	0.0	0.0	0.0	0.0	1.0	0.46	0.25	0.11	0.06	0.31	0.58	0.58	0.61	0.18	0.36	0.28
AMTR_s00023p00252370 (evm_27.TU.AmTr_v1.0_scaffold00023.248)	0.53	0.48	0.72	0.22	0.58	0.18	0.11	0.01	0.08	0.09	1.0	0.91	0.6	0.5	0.49	0.64	0.99	0.72	0.6	0.55	0.54	0.53
AMTR_s00025p00212870 (evm_27.TU.AmTr_v1.0_scaffold00025.284)	0.39	0.24	0.47	0.07	0.29	0.02	0.01	0.01	0.01	0.01	0.83	0.7	0.5	0.27	0.21	0.58	1.0	0.51	0.36	0.3	0.36	0.42
AMTR_s00028p00234070 (evm_27.TU.AmTr_v1.0_scaffold00028.115)	1.0	0.14	0.54	0.1	0.38	0.05	0.15	0.07	0.16	0.16	0.91	0.84	0.65	0.58	0.44	0.84	0.8	0.65	0.6	0.59	0.46	0.54
AMTR_s00029p00053440 (evm_27.TU.AmTr_v1.0_scaffold00029.44)	0.76	0.53	0.55	0.02	0.7	0.01	0.03	0.0	0.06	0.06	1.0	0.95	0.47	0.4	0.28	0.78	0.56	0.6	0.49	0.27	0.43	0.36
AMTR_s00032p00206100 (evm_27.TU.AmTr_v1.0_scaffold00032.197)	0.63	0.0	0.77	0.07	0.13	0.13	0.01	0.0	0.01	0.01	0.98	0.51	0.46	0.27	0.21	0.18	1.0	0.46	0.37	0.82	0.58	0.5
AMTR_s00033p00201990 (evm_27.TU.AmTr_v1.0_scaffold00033.172)	0.35	0.3	0.88	0.04	0.62	0.02	0.08	0.11	0.15	0.16	0.98	0.74	0.67	0.5	0.41	0.37	1.0	0.63	0.49	0.32	0.21	0.64
AMTR_s00033p00207130 (evm_27.TU.AmTr_v1.0_scaffold00033.179)	0.52	0.45	0.2	0.23	0.59	0.0	0.23	0.08	0.19	0.14	1.0	0.63	0.6	0.57	0.51	0.81	0.71	0.77	0.82	0.53	0.25	0.43
AMTR_s00035p00224680 (evm_27.TU.AmTr_v1.0_scaffold00035.51)	0.89	0.57	1.0	0.18	0.46	0.02	0.07	0.04	0.37	0.17	0.75	0.6	0.66	0.48	0.53	0.78	0.74	0.55	0.48	0.6	0.59	0.65
AMTR_s00036p00071330 (evm_27.TU.AmTr_v1.0_scaffold00036.25)	0.51	0.56	0.66	0.19	0.34	0.0	0.03	0.0	0.05	0.07	0.9	0.83	0.74	0.51	0.29	0.66	1.0	0.63	0.52	0.5	0.48	0.56
AMTR_s00036p00204260 (evm_27.TU.AmTr_v1.0_scaffold00036.119)	0.35	0.76	0.85	0.29	0.45	0.01	0.14	0.06	0.12	0.14	0.77	0.64	0.47	0.28	0.28	0.29	1.0	0.37	0.3	0.25	0.18	0.49
AMTR_s00038p00015530 (evm_27.TU.AmTr_v1.0_scaffold00038.2)	0.35	0.2	0.28	0.02	0.21	0.19	0.02	0.0	0.05	0.03	1.0	0.67	0.33	0.14	0.22	0.29	0.57	0.41	0.5	0.48	0.2	0.35
AMTR_s00039p00037360 (evm_27.TU.AmTr_v1.0_scaffold00039.12)	0.62	0.31	0.95	0.04	0.65	0.04	0.17	0.14	0.08	0.1	0.76	0.54	0.55	0.37	0.52	0.39	1.0	0.57	0.58	0.74	0.42	0.48
AMTR_s00040p00223590 (evm_27.TU.AmTr_v1.0_scaffold00040.260)	0.49	0.23	0.22	0.17	0.34	0.0	0.06	0.0	0.07	0.06	0.8	0.62	0.52	0.22	0.32	0.37	1.0	0.36	0.42	0.39	0.27	0.3
AMTR_s00040p00235870 (evm_27.TU.AmTr_v1.0_scaffold00040.305)	0.52	0.42	0.92	0.15	0.4	0.03	0.17	0.0	0.16	0.18	1.0	0.5	0.41	0.58	0.33	0.23	0.8	0.4	0.41	0.43	0.35	0.42
AMTR_s00044p00141950 (evm_27.TU.AmTr_v1.0_scaffold00044.138)	0.39	0.31	0.6	0.19	0.31	0.01	0.17	0.11	0.12	0.14	1.0	0.58	0.53	0.34	0.25	0.46	0.52	0.47	0.47	0.5	0.17	0.38
AMTR_s00045p00084300 (evm_27.TU.AmTr_v1.0_scaffold00045.75)	0.0	0.57	0.21	0.28	0.28	0.0	0.03	0.1	0.02	0.02	1.0	0.78	0.65	0.36	0.44	0.54	0.95	0.74	0.71	0.53	0.54	0.55
AMTR_s00046p00180090 (evm_27.TU.AmTr_v1.0_scaffold00046.101)	0.38	0.14	0.05	0.17	0.22	0.1	0.02	0.0	0.03	0.03	1.0	0.53	0.29	0.08	0.08	0.16	0.68	0.52	0.64	0.15	0.21	0.39
AMTR_s00046p00222600 (evm_27.TU.AmTr_v1.0_scaffold00046.158)	0.0	0.0	0.0	0.03	0.09	0.0	0.0	0.0	0.0	0.0	1.0	0.43	0.31	0.09	0.11	0.88	0.56	0.48	0.44	0.32	0.11	0.42
AMTR_s00048p00165750 (evm_27.TU.AmTr_v1.0_scaffold00048.120)	1.0	0.12	0.5	0.14	0.35	0.15	0.44	0.07	0.29	0.28	0.86	0.81	0.64	0.55	0.42	0.68	0.87	0.56	0.52	0.68	0.49	0.45
AMTR_s00052p00172760 (evm_27.TU.AmTr_v1.0_scaffold00052.82)	0.66	0.55	0.54	0.26	0.57	0.03	0.18	0.08	0.18	0.17	0.84	0.87	0.59	0.37	0.33	0.41	1.0	0.6	0.58	0.5	0.36	0.51
AMTR_s00056p00165600 (evm_27.TU.AmTr_v1.0_scaffold00056.145)	0.69	0.54	0.41	0.11	0.28	0.13	0.15	0.04	0.2	0.19	1.0	0.88	0.5	0.53	0.48	0.48	0.77	0.61	0.67	0.64	0.51	0.35
AMTR_s00059p00133780 (evm_27.TU.AmTr_v1.0_scaffold00059.112)	0.15	0.42	0.45	0.01	0.2	0.0	0.01	0.0	0.02	0.02	0.87	0.84	0.7	0.51	0.29	0.71	1.0	0.57	0.5	0.4	0.4	0.6
AMTR_s00063p00089600 (evm_27.TU.AmTr_v1.0_scaffold00063.14)	0.0	0.13	0.22	0.02	0.47	0.0	0.01	0.0	0.02	0.02	1.0	0.47	0.35	0.29	0.24	0.27	0.57	0.63	0.51	0.5	0.1	0.24
AMTR_s00066p00197320 (evm_27.TU.AmTr_v1.0_scaffold00066.259)	1.0	0.4	0.05	0.01	0.33	0.01	0.18	0.1	0.18	0.18	0.77	0.58	0.97	0.55	0.26	0.52	0.83	0.45	0.52	0.51	0.35	0.79
AMTR_s00068p00169260 (evm_27.TU.AmTr_v1.0_scaffold00068.123)	1.0	0.03	0.6	0.06	0.16	0.01	0.01	0.0	0.07	0.03	0.51	0.53	0.7	0.6	0.3	0.46	0.77	0.67	0.6	0.53	0.33	0.46
AMTR_s00077p00181870 (evm_27.TU.AmTr_v1.0_scaffold00077.206)	1.0	0.46	0.36	0.11	0.17	0.01	0.11	0.02	0.14	0.12	0.81	0.66	0.69	0.53	0.41	0.51	0.78	0.45	0.63	0.6	0.26	0.53
AMTR_s00085p00045440 (evm_27.TU.AmTr_v1.0_scaffold00085.18)	0.69	0.46	0.46	0.1	0.52	0.01	0.15	0.07	0.1	0.12	0.98	0.98	0.66	0.54	0.41	1.0	0.87	0.66	0.81	0.41	0.26	0.44
AMTR_s00095p00139840 (evm_27.TU.AmTr_v1.0_scaffold00095.102)	0.74	0.41	0.28	0.39	0.5	0.17	0.05	0.07	0.06	0.05	0.9	0.69	0.59	0.33	0.28	0.48	1.0	0.48	0.55	0.57	0.38	0.43
AMTR_s00111p00088150 (evm_27.TU.AmTr_v1.0_scaffold00111.58)	0.16	0.47	0.65	0.15	0.61	0.03	0.09	0.0	0.11	0.1	0.88	0.66	0.54	0.27	0.31	0.36	1.0	0.54	0.51	0.27	0.29	0.49
AMTR_s00119p00108550 (evm_27.TU.AmTr_v1.0_scaffold00119.84)	0.92	0.0	0.47	0.01	0.28	0.0	0.02	0.0	0.05	0.05	1.0	0.79	0.8	0.63	0.44	0.7	0.78	0.61	0.77	0.43	0.41	0.58
AMTR_s00119p00129000 (evm_27.TU.AmTr_v1.0_scaffold00119.102)	0.63	0.35	0.41	0.17	0.22	0.0	0.02	0.0	0.03	0.03	1.0	0.73	0.4	0.27	0.21	0.55	0.74	0.51	0.52	0.37	0.3	0.34
AMTR_s00122p00131800 (evm_27.TU.AmTr_v1.0_scaffold00122.69)	0.57	0.64	1.0	0.33	0.45	0.01	0.14	0.02	0.11	0.11	0.89	0.63	0.45	0.38	0.4	0.44	0.73	0.55	0.44	0.4	0.22	0.46
AMTR_s00148p00070260 (evm_27.TU.AmTr_v1.0_scaffold00148.44)	0.88	0.51	1.0	0.13	0.38	0.01	0.06	0.0	0.1	0.11	0.98	0.84	0.73	0.42	0.5	0.73	0.98	0.67	0.72	0.61	0.58	0.58
AMTR_s00164p00040330 (evm_27.TU.AmTr_v1.0_scaffold00164.15)	0.58	0.22	0.57	0.1	0.25	0.01	0.07	0.08	0.08	0.08	1.0	0.95	0.47	0.31	0.36	0.63	0.57	0.55	0.52	0.7	0.93	0.38
AMTR_s00168p00030500 (evm_27.TU.AmTr_v1.0_scaffold00168.8)	0.68	0.8	1.0	0.06	0.53	0.13	0.4	0.19	0.38	0.38	0.75	0.69	0.7	0.53	0.55	0.49	0.78	0.54	0.51	0.68	0.37	0.61
AMTR_s00171p00062290 (evm_27.TU.AmTr_v1.0_scaffold00171.46)	0.56	0.0	0.66	0.13	0.25	0.0	0.04	0.01	0.04	0.04	1.0	0.61	0.39	0.34	0.26	0.42	0.47	0.48	0.5	0.36	0.33	0.23
AMTR_s00177p00032620 (evm_27.TU.AmTr_v1.0_scaffold00177.11)	0.61	0.31	0.46	0.1	0.31	0.0	0.03	0.03	0.08	0.08	0.96	1.0	0.71	0.39	0.48	0.66	0.82	0.66	0.51	0.45	0.41	0.52
AMTR_s00225p00019510 (evm_27.TU.AmTr_v1.0_scaffold00225.2)	0.04	0.43	0.38	0.32	0.23	0.01	0.01	0.0	0.02	0.02	1.0	0.84	0.48	0.24	0.23	0.62	0.87	0.62	0.81	0.47	0.57	0.44

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)