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Heatmap: Cluster_79 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00197000 (evm_27.TU.AmTr_v1.0_scaffold00002.180)
 - - - - -5.78 - - - - - - -2.24 - - - - - - - - - 4.44
AMTR_s00004p00239840 (evm_27.TU.AmTr_v1.0_scaffold00004.231)
 - - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00005p00207640 (evm_27.TU.AmTr_v1.0_scaffold00005.84)
 - - - - -0.24 - - - - - -1.61 - - - - - - - - - - 4.38
AMTR_s00006p00253460 (evm_27.TU.AmTr_v1.0_scaffold00006.169)
 - - - - - - 2.96 - - - - - - - - - - - - - - 3.83
AMTR_s00007p00258390 (evm_27.TU.AmTr_v1.0_scaffold00007.311)
 - - - - 1.66 - -3.31 - - - - - - - - - - - - - - 4.23
AMTR_s00007p00264250 (evm_27.TU.AmTr_v1.0_scaffold00007.346)
 - - - - -4.49 - - - - -4.55 - - - - - -2.35 - - - - - 4.44
AMTR_s00014p00236570 (evm_27.TU.AmTr_v1.0_scaffold00014.101)
 - - - - 1.14 - - - - - -1.74 - -0.74 -5.0 -0.26 - -2.1 - - 0.27 0.69 3.9
AMTR_s00017p00215060 (evm_27.TU.AmTr_v1.0_scaffold00017.144)
 - - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00018p00123430 (evm_27.TU.AmTr_v1.0_scaffold00018.57)
 - - - - 2.71 - 1.4 - - -0.06 - - - - - - - - - - - 3.57
AMTR_s00019p00101400 (evm_27.TU.AmTr_v1.0_scaffold00019.77)
 - - - - - - - - - - - - - - 0.43 - - - - - - 4.37
AMTR_s00019p00152080 (evm_27.TU.AmTr_v1.0_scaffold00019.140)
 - - - - -4.81 - -4.63 - -4.32 -4.46 - - -4.58 -4.28 -5.67 - -2.03 - - -6.68 - 4.42
AMTR_s00021p00144990 (evm_27.TU.AmTr_v1.0_scaffold00021.96)
 - - - - -0.7 - - - - - - - -3.12 - 0.01 0.93 - - - - - 4.2
AMTR_s00023p00151010 (evm_27.TU.AmTr_v1.0_scaffold00023.88)
 - - - - 1.27 - - - -0.51 - - - - - - - - - - - - 4.24
AMTR_s00023p00192080 (evm_27.TU.AmTr_v1.0_scaffold00023.131)
 - - - 0.83 -4.54 - - - - - -0.91 -1.57 -1.86 -7.36 -5.12 -4.14 - -3.76 -3.22 -6.24 - 4.23
AMTR_s00023p00192280 (evm_27.TU.AmTr_v1.0_scaffold00023.132)
 - - - - 1.68 - - - - - - - -1.58 - - - - - - -2.97 - 4.2
AMTR_s00026p00242870 (evm_27.TU.AmTr_v1.0_scaffold00026.135)
 - - - -0.19 2.26 - - - - - - - - - - - - - - - - 4.03
AMTR_s00029p00039560 (evm_27.TU.AmTr_v1.0_scaffold00029.25)
 - - - - -4.73 - - - - - -1.14 -0.38 -0.06 1.45 -3.91 - - - - -2.89 - 4.07
AMTR_s00038p00226720 (evm_27.TU.AmTr_v1.0_scaffold00038.213)
 - - - - 1.16 - - - - - - - - - - - - - - - - 4.3
AMTR_s00041p00178600 (evm_27.TU.AmTr_v1.0_scaffold00041.141)
 - - - - - - 0.79 - 0.28 -0.98 - - -1.64 - - - - - - - - 4.19
AMTR_s00041p00187220 (evm_27.TU.AmTr_v1.0_scaffold00041.159)
 - - - - - - - - - - - 2.76 - - - 1.62 - - - - - 3.6
AMTR_s00047p00087590 (evm_27.TU.AmTr_v1.0_scaffold00047.34)
 - - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00047p00189560 (evm_27.TU.AmTr_v1.0_scaffold00047.120)
 - - - - 0.28 - -4.66 - -0.71 -1.37 - - -4.2 -6.81 -1.85 - - - - - - 4.28
AMTR_s00048p00148310 (evm_27.TU.AmTr_v1.0_scaffold00048.99)
 - - - - - - - - - - -1.76 - - - - - 0.48 -0.21 - - - 4.28
AMTR_s00049p00122130 (evm_27.TU.AmTr_v1.0_scaffold00049.100)
 - - - - - - - -1.35 - - - - -2.14 -1.76 - - - - - - - 4.4
AMTR_s00051p00205990 (evm_27.TU.AmTr_v1.0_scaffold00051.89)
 - - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00057p00156490 (evm_27.TU.AmTr_v1.0_scaffold00057.143)
 - - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00057p00156550 (evm_27.TU.AmTr_v1.0_scaffold00057.144)
 - - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00059p00109030 (evm_27.TU.AmTr_v1.0_scaffold00059.82)
 - - - - 1.82 - - - - - - - - - - - - - - - - 4.21
AMTR_s00061p00214890 (evm_27.TU.AmTr_v1.0_scaffold00061.270)
 - - - - -6.57 - -9.79 - - - - - -4.66 - - - - - - - - 4.46
AMTR_s00061p00215070 (evm_27.TU.AmTr_v1.0_scaffold00061.271)
 - - - - -7.32 - -8.31 - - - - -5.85 -3.25 -5.77 -9.61 - - - - -9.6 - 4.45
AMTR_s00061p00215230 (evm_27.TU.AmTr_v1.0_scaffold00061.272)
 - - - - -4.08 - -9.79 - - - - -7.06 - -12.39 - - - - - -8.24 - 4.45
AMTR_s00061p00215400 (evm_27.TU.AmTr_v1.0_scaffold00061.273)
 - - - - -1.17 - -3.16 - - - - - - - - - -0.64 - - - - 4.38
AMTR_s00061p00215530 (evm_27.TU.AmTr_v1.0_scaffold00061.275)
 - - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00066p00136150 (evm_27.TU.AmTr_v1.0_scaffold00066.131)
 - - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00069p00178930 (evm_27.TU.AmTr_v1.0_scaffold00069.168)
 - - - - -0.59 - - - - - - - - - -0.83 - - - - - - 4.38
AMTR_s00071p00062800 (evm_27.TU.AmTr_v1.0_scaffold00071.35)
 - - - -3.65 0.87 - - - - - - - 1.29 -1.81 -2.8 - - - - - - 4.11
AMTR_s00077p00067510 (evm_27.TU.AmTr_v1.0_scaffold00077.47)
 - - - - -1.81 - -5.87 - - -5.89 - - -6.26 -6.72 -5.54 - - - - -5.27 - 4.43
AMTR_s00095p00104690 (evm_27.TU.AmTr_v1.0_scaffold00095.61)
 - - - - -8.97 - - - - - - -4.69 -6.58 - -7.04 -0.5 -6.67 - - -7.17 - 4.41
AMTR_s00095p00105100 (evm_27.TU.AmTr_v1.0_scaffold00095.62)
 - - - - -6.73 - - - - - - - -4.95 - -3.09 -2.88 - - - -6.3 - 4.44
AMTR_s00095p00172710 (evm_27.TU.AmTr_v1.0_scaffold00095.151)
 - - - - -7.06 - - - - - -3.44 - -6.27 - -4.41 - -6.21 - - -8.63 - 4.45
AMTR_s00111p00033060 (evm_27.TU.AmTr_v1.0_scaffold00111.15)
 - - - - -5.91 - -5.72 - -5.8 -7.14 -5.07 - -4.85 -6.82 -7.29 - - - -5.5 - -4.68 4.45
AMTR_s00114p00075760 (evm_27.TU.AmTr_v1.0_scaffold00114.27)
 - - - -1.54 0.23 - - - - - - - - - -3.23 - - - - - - 4.35
AMTR_s00121p00130840 (evm_27.TU.AmTr_v1.0_scaffold00121.39)
 - - - - -2.25 - - - - - - - 0.01 - - - - - - - - 4.38
AMTR_s00129p00078590 (evm_27.TU.AmTr_v1.0_scaffold00129.49)
 - 2.44 - - 3.12 - - - - - - - 0.95 1.01 - - - - - - - 1.98
AMTR_s00131p00082040 (evm_27.TU.AmTr_v1.0_scaffold00131.54)
 - - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00149p00097070 (evm_27.TU.AmTr_v1.0_scaffold00149.80)
 - - - - -0.05 - - - - - -1.31 -0.82 - - -6.8 - 0.75 0.31 - -4.22 - 4.09
AMTR_s00162p00034400 (evm_27.TU.AmTr_v1.0_scaffold00162.12)
 - - - - 0.95 - - - - - - - - - - - - - - - - 4.33
AMTR_s00162p00034800 (evm_27.TU.AmTr_v1.0_scaffold00162.13)
 - - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00184p00048490 (evm_27.TU.AmTr_v1.0_scaffold00184.22)
 - - - - 2.85 - - - - - - - - - - - - - - - - 3.89
AMTR_s00203p00031460 (evm_27.TU.AmTr_v1.0_scaffold00203.9)
 - - - - 2.27 - - - - - - - - - - - - - - - - 4.1
AMTR_s00352p00012360 (evm_27.TU.AmTr_v1.0_scaffold00352.2)
 - - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00427p00013070 (evm_27.TU.AmTr_v1.0_scaffold00427.3)
 - - - - - - - - - - - - 1.55 - - - 2.49 - - - - 3.75
AMTR_s00743p00011410 (evm_27.TU.AmTr_v1.0_scaffold00743.1)
 - - - - - - - - - - - - - - 1.9 - - - - - - 4.19
AMTR_s00995p00008650 (evm_27.TU.AmTr_v1.0_scaffold00995.1)
 - - - - 3.34 - - - - -24.45 - - - - - - - - - - - 3.57
AMTR_s01790p00008340 (evm_27.TU.AmTr_v1.0_scaffold01790.1)
 - - - - - - 2.4 - - - - - - 2.82 - - - - - - - 3.27
AMTR_s04787p00001380 (evm_27.TU.AmTr_v1.0_scaffold04787.1)
 - - - - -1.12 - -1.16 - - - - - - - - - - - - 1.51 - 4.19

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.