Heatmap: Cluster_138 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
- 3.92 - -0.47 3.44 - - - - - - - - - - - - - - - - - - - - - - 1.92 - - - 0.77 - - - - - - - - - 1.08 - - - - - - 4.56 - - - - - - - - -
-1.25 5.71 - -3.73 - - - - - - - - -4.87 - - -4.2 -2.46 - - -1.15 -2.42 - -4.75 -1.92 -4.03 - - 0.24 -3.6 -2.1 -1.99 -1.49 -2.02 -1.5 - -2.55 - - - - - -7.82 - - - -5.56 - - -2.09 - - -3.43 -4.87 -3.56 -1.02 -2.55 - -
- 4.27 - 0.74 - - 2.0 - - - - - 2.55 - - - - - - - - - - - - - - - 0.1 - 0.37 - - - - - - 1.81 - - - 0.15 2.93 - - - - - 3.64 - - - -4.17 - - - - -
1.98 3.17 -3.68 0.2 1.28 - 0.15 -4.3 -4.24 - - - 0.7 -1.92 -1.38 -0.21 -0.12 -4.03 - - - - - -3.4 -3.01 -1.95 -1.5 -3.96 -3.09 - -2.77 -1.8 -1.41 - 2.04 2.56 -0.46 -0.53 1.63 1.04 1.22 0.57 0.36 -0.33 2.32 -2.45 - -2.58 0.35 -2.92 - - -2.41 2.05 -1.07 - - -1.93
1.24 4.29 -0.54 -0.56 -2.55 - - - - - - - 0.36 - - - -4.54 -3.63 - - -1.52 -2.57 -0.45 -1.11 -1.97 - -3.7 1.13 -2.63 -0.1 3.31 1.72 1.6 -2.67 2.25 -1.85 -0.03 -0.65 -1.4 -0.41 -2.37 -1.18 -1.06 -1.38 - - -2.44 -1.95 -0.26 -4.98 - -3.69 -3.35 -0.69 - - - -
2.35 2.8 0.37 -1.4 -3.12 - - - - - - -6.25 1.4 -0.43 -1.61 -1.51 0.24 -2.19 -0.69 -1.73 0.52 - -1.43 -0.24 -0.4 1.46 -0.86 1.72 0.54 1.64 2.31 1.63 1.07 2.44 0.41 -0.34 - -3.45 -2.11 - -2.11 -2.12 - - -0.87 -0.96 -4.85 -1.02 0.85 - -2.96 -2.26 -2.31 -0.61 -4.6 - - -
4.56 4.13 2.54 - - - - - - - - - - - - - - - - 1.89 - 2.64 - - - - - - - - - - - - - - - - - - - -0.79 - - - - - - - - - - -0.68 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.91 - 0.39 -0.44 - - - - - - - - - - - - - - - -2.5 - - - -3.26 - - -0.38 - -1.77 -0.52 -3.24 - 4.2 0.79 - - - - - - - - - - - - -2.2 -2.16 - - - - 1.61 - - - -
1.58 3.61 1.83 -2.72 -7.0 -7.42 -6.72 - -10.38 - - - 2.49 -6.58 -6.91 -6.29 1.44 -0.03 -0.26 -1.52 0.51 -3.48 1.5 1.24 0.84 -2.8 -5.62 0.54 0.21 -0.37 -0.62 -1.01 -0.94 -0.22 2.75 -0.17 - - - - - -4.98 -4.93 - -3.01 0.78 -6.19 0.41 -5.14 - -0.89 -0.37 -3.6 -1.36 -7.41 - - 0.29
2.18 3.57 1.47 -1.78 -2.02 -9.37 -2.48 -9.29 -8.85 -8.78 -9.72 -8.57 -0.4 -0.71 -2.92 -3.07 0.07 -1.8 2.21 2.33 0.32 - 0.48 0.36 -0.12 -2.3 -6.73 0.45 -0.57 -0.02 -0.17 -0.57 -0.55 2.87 -0.14 -3.53 -3.23 -3.92 -3.72 -3.89 -4.11 -3.68 -2.72 -2.82 -3.39 0.8 -0.57 -1.8 -4.53 -1.55 -2.62 -0.63 -0.89 -2.91 -1.57 -0.23 -2.66 -2.53
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.78 - - - 1.64 - - - - -
- - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
3.65 4.55 1.66 -7.98 -9.35 - - -12.66 - - - - -1.72 -3.35 -3.61 -2.25 -1.08 -1.18 0.91 3.24 -6.19 -3.05 -10.7 -4.32 -5.77 -3.3 -5.66 -3.09 -3.33 -4.34 -5.26 -5.28 -4.25 -3.9 -1.17 -3.77 -4.02 -5.46 -2.42 -2.7 -2.76 -3.19 -2.54 -1.69 -3.67 -3.83 - 0.49 0.27 -6.57 -7.54 -9.23 -4.81 -2.78 -6.62 -8.27 -2.94 -1.62
1.15 3.41 0.35 -0.78 0.63 -2.0 -0.28 -0.69 -1.42 -2.13 -1.9 -2.0 0.29 0.09 -1.95 -1.88 0.84 -0.54 0.22 0.99 -0.87 - 0.24 -0.37 -1.05 -4.16 -4.75 -0.63 -2.12 -1.29 0.04 -0.05 -0.33 - -0.23 -2.67 - - - - - -5.05 -4.68 -3.64 -4.83 -0.79 -1.12 -0.86 1.21 0.73 2.48 0.97 -0.09 -0.71 -0.25 1.69 1.26 0.01
3.97 3.97 1.52 -0.36 0.53 - - - - - - - 1.82 - 1.25 -1.39 -0.6 0.95 - -0.21 -0.5 - - -2.49 - - - -0.46 - - - - - - - - - - - - - - - - - - - 1.48 -1.14 - 0.03 - -0.83 -0.37 - - - 2.22
0.85 3.75 -1.15 -1.4 -7.47 - - - - - - - -0.36 -3.51 -8.94 -7.31 0.99 -4.73 -1.6 1.67 -1.53 -7.89 0.89 -0.66 -1.72 -6.13 -4.7 0.05 -3.09 -1.17 1.56 0.1 -0.18 1.06 0.65 -5.29 - -4.2 - - -4.47 -6.84 - - -6.43 1.43 -2.8 -0.63 -5.52 1.27 3.56 -0.36 -1.42 -0.82 -7.66 -2.32 0.83 -0.71
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - -
3.43 4.29 1.59 -0.65 -3.3 - - -7.23 - -3.79 - - 1.27 -2.59 - -5.76 2.12 0.13 -1.59 -3.02 -3.64 - -1.48 -2.0 -1.52 - - 0.53 -0.43 -2.8 1.03 -1.06 2.05 - 2.25 -1.04 - - - - - - - - - - - - -2.99 - - - -7.24 - - - - -
- 4.52 3.02 - - - - - - - - - - - - - - - 3.86 3.65 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.94 - - 3.47 - - - - - - - 1.97 - - - - - - - - - - - - - - - - - - - - - - - - - - 4.02 - -0.19 - - - - - - 3.37 - - - -2.43 - - - - -
2.61 4.01 0.29 2.25 - - - - - - - - 2.8 - - - 1.62 -0.19 - - - - - - - - - - - - - - - - - - 2.66 - - - - -1.49 - - - - - -0.1 3.11 - - - 0.04 0.71 - - - -
1.28 3.74 1.03 -4.4 - - - - - - - - 1.5 2.35 1.67 1.33 0.77 0.54 1.1 0.94 0.11 -2.35 -0.16 -0.34 -0.87 -0.43 -0.93 1.06 0.87 0.83 -1.44 -0.96 -1.06 -2.61 -0.83 -2.28 - - - - - -5.85 - - -1.79 -1.69 -3.49 -1.59 -0.35 -2.34 -0.85 -0.33 0.36 -3.59 -2.76 -2.35 0.44 -4.97
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.56 - - - - 2.86 - - - - - 2.79 - - - - - - - - - - - - - - 2.95 - - 2.29 1.87 - - - - - - - - - - - - - - - - 1.76 - - - -0.75 - - - - -
- 4.23 - - - - 2.99 - - - - - 0.88 - - - - - - - - - - - - - - - - - 2.6 - 0.22 - - - - - - - - 0.28 - - - - - - 4.35 - - - -0.79 - - - - -
- 5.3 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.14 - - - 0.09 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - -
- 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.65 3.81 1.82 0.24 -5.04 - -6.36 - - - - - 0.02 -1.67 -2.78 -0.91 2.14 0.76 2.09 1.39 -0.74 -7.18 -0.07 -1.01 -2.01 -4.71 -6.38 -0.22 -2.04 -0.95 0.11 -1.05 -2.04 -0.6 -0.04 0.05 - -2.52 - -3.7 -3.57 -4.03 -2.75 -4.53 -3.58 -1.58 0.29 2.37 -3.83 -4.04 -4.82 -0.6 -0.14 0.34 -0.09 -0.98 - -0.29
2.03 3.58 -1.08 -4.09 -4.99 - -7.43 -6.88 -7.9 - - - -0.58 -0.76 -1.68 -1.05 -0.35 -1.13 -0.79 -0.12 0.13 -4.88 0.16 0.13 -0.08 -1.97 -5.75 0.73 0.39 0.68 1.59 1.34 0.52 0.05 1.29 -2.26 - -5.72 -6.37 -6.81 -5.37 -5.18 -7.23 - -4.4 -0.37 -3.87 1.54 2.13 -0.09 0.96 -1.17 -1.19 0.0 0.47 0.43 -0.62 -1.58
0.17 2.66 0.16 - - - -0.62 2.26 1.32 - - - 1.58 -0.18 - 0.44 - - - -1.65 -2.41 - 0.62 -0.57 -1.25 - - 2.32 -2.52 1.33 3.99 2.65 -0.02 - - - - - - - - - - - - -1.75 - - 1.0 - - - -5.63 - - - - -
1.5 3.14 1.55 2.71 0.58 - 1.47 -2.76 - -4.74 - - 3.05 -3.01 -1.13 -1.09 - -2.7 1.4 0.88 - - -0.8 -2.32 - - -1.92 -1.11 - - - - - 1.42 - - - - - -0.03 - - - - - - - -2.18 0.87 - -0.52 -0.3 -1.75 -1.37 1.86 0.04 -1.06 1.96
- 4.82 - 1.33 - - - - - - - - -2.17 - - - - - - - -0.28 - -1.34 -1.68 -2.12 - - 0.59 - 0.41 2.67 2.24 0.97 3.12 - - - - - - - - - - - - - - -1.99 - - - -1.7 - - - - -
- 4.01 - 0.54 - - - - - - - - -0.84 - - - - - - - 0.35 - -0.99 -0.72 -0.73 - - 1.45 - 1.0 3.64 2.95 0.34 2.97 -0.1 -1.88 - - - - - - - - - - - - 0.7 - - - -5.2 - - - - -
- - - - - - - 1.85 - - - - 4.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.09 - - - -0.11 - - - - -
3.09 3.48 1.35 -1.87 -1.09 - -4.12 -4.17 -3.8 -4.95 -5.65 -5.2 0.59 1.41 1.14 1.25 -1.64 -0.52 1.94 3.1 -1.8 -0.83 -1.69 -2.5 -1.74 -2.03 -2.53 -1.39 -1.61 -1.42 -1.7 -1.6 -2.44 - - - -3.37 -3.01 -2.33 -2.91 -0.75 -2.65 - -2.29 -2.49 -1.22 -1.33 -1.14 -2.13 0.51 -0.36 -0.29 -0.74 -1.34 -2.68 -2.59 -1.33 -0.57
- - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 2.42 - - - - - - - - - - - 0.54 2.41 1.65 - - - - - - - - - - - - - - - -0.78 - 3.81 - - - - - - 4.01 -0.27 - - - - - - 2.84 - - - - 2.02 - - - -
-0.47 4.03 1.56 -5.46 - - - - - - - - 3.39 -8.29 -8.72 -10.28 -3.21 -1.96 -6.76 -2.86 -2.64 - 0.08 -1.95 -1.57 - -9.15 0.51 -8.93 -0.76 4.08 2.05 -2.32 0.88 -4.6 -5.51 - - - - - -8.5 - - -4.2 - - - - - - - - -8.23 - - - -
- 5.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.69 - - - - - - - - -
1.4 4.17 -1.6 0.05 -0.5 - -4.11 -6.4 -7.28 -7.53 - - -1.8 -3.61 -3.52 -3.21 -1.06 -3.03 -0.29 0.71 -1.47 -4.35 -0.4 -1.34 -1.85 -1.3 -3.37 -1.06 -2.62 -3.28 -1.08 -1.54 -0.53 -1.65 1.7 -0.17 0.12 0.29 -0.13 0.85 -0.13 0.1 1.05 1.49 -0.69 0.18 -3.6 -0.75 -0.26 0.0 0.92 -0.57 -0.96 -0.95 -0.25 -1.19 0.14 -1.56
2.1 2.9 0.71 -3.32 -2.53 - - -7.42 - - - - -1.12 -0.53 -0.59 -1.99 -1.05 -2.25 -0.18 2.46 -0.97 -0.42 -0.93 -0.04 -0.84 1.17 -0.17 -1.56 -0.85 -2.19 -3.09 -1.79 -0.42 1.78 1.6 -0.3 -0.16 0.26 -0.31 0.3 -0.48 0.02 0.91 0.8 -1.59 -1.12 -2.99 1.09 -2.02 0.46 0.51 -2.78 -1.79 -0.63 -2.26 0.03 -1.65 -0.01
2.19 4.81 -1.47 -6.01 - - - - - - - - -0.7 -3.56 -3.86 -1.63 -5.53 -5.59 -0.6 3.22 -2.29 -3.22 -1.59 -1.78 -2.56 -1.72 -1.36 -0.73 -1.91 -2.19 -1.36 -1.82 -1.34 -2.62 -2.11 -3.15 -2.07 -1.34 -2.3 -3.07 -2.68 -2.27 -3.0 -2.97 -2.34 -2.99 -7.66 1.37 1.73 -5.46 -3.93 -5.18 -5.45 0.02 -5.01 -1.62 -4.16 -4.26
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.24 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.36 - - - - - - 3.93 - - - - - - - - -
0.06 3.25 0.72 -6.29 -10.61 -12.61 -10.95 -11.63 -10.51 -9.42 -9.28 -9.38 -0.96 -0.86 -5.68 -5.65 -0.22 -3.23 -0.29 1.01 0.24 -6.69 0.75 0.14 -0.74 -2.65 -5.2 1.61 -0.23 1.08 2.28 1.24 0.67 2.58 0.64 -1.65 -7.02 -6.87 -7.07 -6.1 -6.19 -5.63 -6.84 -7.77 -4.45 0.12 -2.75 -0.28 -2.42 2.08 1.62 -1.7 -2.45 -0.64 -4.39 -0.83 0.35 -0.45
0.34 4.29 0.46 0.13 - - - - -3.94 -5.39 - - -3.23 - - - - - 1.86 4.39 - - - -4.06 - - - - - - - - - - - - - - - - - - - - - -0.19 - 0.85 - -1.34 - -0.51 -3.0 -1.55 0.33 -0.15 0.75 0.82
1.84 3.66 1.3 0.66 -6.0 - - -9.93 -9.34 - -8.86 - -0.41 -2.47 -2.72 -2.24 -3.03 -1.05 -0.08 0.15 -1.87 -0.04 -0.43 -1.29 -1.47 -1.92 -3.64 0.72 -2.97 -0.16 3.32 1.68 -1.45 -1.32 -2.08 -2.24 -2.3 -1.25 -2.7 -1.05 -0.35 0.04 -2.94 -4.9 1.31 0.09 -1.73 -1.71 -1.51 0.23 -0.2 -1.1 -1.13 -1.27 -1.58 -1.69 0.31 -0.81
2.23 3.03 0.76 0.81 2.88 - 1.04 -1.16 -1.59 - - - 1.04 -1.97 -1.53 -1.29 -2.77 -1.18 - -1.34 -0.35 - -0.26 -0.87 -2.53 -2.8 -2.5 -0.75 -1.08 -0.81 3.34 0.6 -0.7 - - - - 0.13 0.22 0.25 - -2.0 - - 0.78 - -1.77 -1.52 1.39 -1.48 -1.37 -2.38 -0.49 -1.54 -1.98 - - -
2.49 3.47 0.51 2.21 2.06 - 0.79 -0.67 -1.84 - - - 1.68 -2.22 -1.78 -1.82 -3.02 -1.43 - - -2.31 - -0.51 -0.55 -2.78 -3.05 -2.75 -1.0 -1.33 0.41 3.03 -0.53 -2.04 - - -0.76 - -0.12 -0.03 0.0 - -1.86 - - 0.53 - -2.02 -1.77 1.62 -1.73 -1.62 -2.63 -0.93 -1.79 -2.23 - - -
- - - - 4.45 - - 0.52 - - - - - 2.41 2.78 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.02 - - - - - - 4.36 - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.